Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00786
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.3  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.6  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/50 (32%), Positives = 20/50 (40%)
 Frame = -3

Query: 679 GHQTPHLLELSMCMSCGVQVHRGGTCP*QCSMVRPFYGITLAGREPAQWD 530
           G  TP   E     S  V     G  P + ++   FYG T    +PAQ D
Sbjct: 224 GADTPWQREYENVNSTVVNWVNAGADPGKLTIGLAFYGHTFQLADPAQHD 273


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 180 ALTNGKVLWPLLEER 136
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 180 ALTNGKVLWPLLEER 136
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 180 ALTNGKVLWPLLEER 136
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 180 ALTNGKVLWPLLEER 136
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 544 VLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 675
           VLF+  +   +GV Y ++ G+SR   + +    T LAL ++  G
Sbjct: 33  VLFVIIVAGNVGVLYTLLFGRSRKSRMNY--FITHLALADLSVG 74


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 434 TKEAQHHPIRHKHSHQA 484
           TK   HH I+ +H HQ+
Sbjct: 101 TKFNPHHEIKLQHLHQS 117


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 427 SLHQRGPTPSDPAQTQSPS 483
           ++HQ+GP    P   Q P+
Sbjct: 197 NMHQQGPPHQQPPIQQQPN 215


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 427 SLHQRGPTPSDPAQTQSPS 483
           ++HQ+GP    P   Q P+
Sbjct: 199 NMHQQGPPHQQPPIQQQPN 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,305
Number of Sequences: 336
Number of extensions: 3314
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)