Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00786
(696 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 169 3e-42
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 169 3e-42
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 169 3e-42
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 169 3e-42
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 169 3e-42
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 46 5e-05
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 46 5e-05
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 42 8e-04
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 42 8e-04
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 42 8e-04
BT011064-1|AAR31135.1| 124|Drosophila melanogaster HL01742p pro... 29 6.0
AE014298-1248|AAF46425.1| 124|Drosophila melanogaster CG3898-PA... 29 6.0
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 169 bits (411), Expect = 3e-42
Identities = 90/189 (47%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCPLRSTNLPRHWT 312
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAV K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 313 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 489
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 490 RRRRRTLVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 669
+++ + +VIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213
Query: 670 SGDRASFSK 696
+ D+A+F K
Sbjct: 214 NNDKANFGK 222
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 75 LQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEP 134
Query: 435 XXRPNTIRSGTNTVTKLVEKKKA 503
+P+ + +GTNTVTKL+E+KKA
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKA 157
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 169 bits (411), Expect = 3e-42
Identities = 90/189 (47%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCPLRSTNLPRHWT 312
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAV K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 313 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 489
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 490 RRRRRTLVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 669
+++ + +VIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213
Query: 670 SGDRASFSK 696
+ D+A+F K
Sbjct: 214 NNDKANFGK 222
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 75 LQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEP 134
Query: 435 XXRPNTIRSGTNTVTKLVEKKKA 503
+P+ + +GTNTVTKL+E+KKA
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKA 157
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 169 bits (411), Expect = 3e-42
Identities = 90/189 (47%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCPLRSTNLPRHWT 312
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAV K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 313 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 489
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 490 RRRRRTLVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 669
+++ + +VIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213
Query: 670 SGDRASFSK 696
+ D+A+F K
Sbjct: 214 NNDKANFGK 222
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 75 LQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEP 134
Query: 435 XXRPNTIRSGTNTVTKLVEKKKA 503
+P+ + +GTNTVTKL+E+KKA
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKA 157
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 169 bits (411), Expect = 3e-42
Identities = 90/189 (47%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCPLRSTNLPRHWT 312
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAV K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 313 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 489
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 490 RRRRRTLVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 669
+++ + +VIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213
Query: 670 SGDRASFSK 696
+ D+A+F K
Sbjct: 214 NNDKANFGK 222
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 75 LQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEP 134
Query: 435 XXRPNTIRSGTNTVTKLVEKKKA 503
+P+ + +GTNTVTKL+E+KKA
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKA 157
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 169 bits (411), Expect = 3e-42
Identities = 90/189 (47%), Positives = 112/189 (59%), Gaps = 1/189 (0%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCPLRSTNLPRHWT 312
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAV K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 313 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTQSPSWS 489
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 490 RRRRRTLVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 669
+++ + +VIAHDVDP+ELVLFLPALCRKMGVPYCIVKGK+RLG LV RKTCT LALT V+
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVD 213
Query: 670 SGDRASFSK 696
+ D+A+F K
Sbjct: 214 NNDKANFGK 222
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/83 (51%), Positives = 54/83 (65%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 75 LQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEP 134
Query: 435 XXRPNTIRSGTNTVTKLVEKKKA 503
+P+ + +GTNTVTKL+E+KKA
Sbjct: 135 KKKPSYVSAGTNTVTKLIEQKKA 157
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 46.0 bits (104), Expect = 5e-05
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 508 LVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTN 663
+V+A D +PIE++L LP LC VPY V+ K LG V R C TN
Sbjct: 53 VVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTN 106
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 46.0 bits (104), Expect = 5e-05
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 508 LVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTN 663
+V+A D +PIE++L LP LC VPY V+ K LG V R C TN
Sbjct: 53 VVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTN 106
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 511 VIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGD 678
+ A DV P++++ LPA+C + G+PY ++ LGA V R T L N E D
Sbjct: 87 IFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVRQNEEYKD 144
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 511 VIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGD 678
+ A DV P++++ LPA+C + G+PY ++ LGA V R T L N E D
Sbjct: 87 IFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVRQNEEYKD 144
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 511 VIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGD 678
+ A DV P++++ LPA+C + G+PY ++ LGA V R T L N E D
Sbjct: 87 IFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVRQNEEYKD 144
>BT011064-1|AAR31135.1| 124|Drosophila melanogaster HL01742p
protein.
Length = 124
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 271 FRRR*RQPSGAGCGY 227
F+RR QPSG GCGY
Sbjct: 37 FKRRLLQPSGCGCGY 51
>AE014298-1248|AAF46425.1| 124|Drosophila melanogaster CG3898-PA
protein.
Length = 124
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 271 FRRR*RQPSGAGCGY 227
F+RR QPSG GCGY
Sbjct: 37 FKRRLLQPSGCGCGY 51
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,001,593
Number of Sequences: 53049
Number of extensions: 655906
Number of successful extensions: 2351
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2346
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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