Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00782
(734 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to p... 59 3e-09
At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to S... 58 6e-09
At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to p... 58 6e-09
At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identic... 57 1e-08
At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / aller... 56 2e-08
At1g78830.1 68414.m09189 curculin-like (mannose-binding) lectin ... 29 2.4
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem... 29 3.2
At1g16900.1 68414.m02047 curculin-like (mannose-binding) lectin ... 29 3.2
At1g12530.1 68414.m01451 hypothetical protein ; expression suppo... 29 4.2
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 28 5.6
At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) simil... 28 7.4
At4g15370.1 68417.m02349 pentacyclic triterpene synthase, putati... 28 7.4
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m... 28 7.4
At4g37390.1 68417.m05294 auxin-responsive GH3 family protein sim... 27 9.8
>At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to
profilin 4 SP:Q38905 GI:1353768 from [Arabidopsis
thaliana]
Length = 134
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Frame = +2
Query: 56 MSWQDYVDKQLMAS------RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENE 214
MSWQ YVD+ LM +T AAI GHDG+VWA+S F + E+ I+ F+
Sbjct: 1 MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60
Query: 215 SLLTSGGVTIAGTRYIYLSGTDHII 289
L G+ +AG +Y+ + G + +
Sbjct: 61 GHLAPTGMFLAGLKYMVIQGEPNAV 85
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +1
Query: 301 GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 429
G G+ KT Q++V LYEEP+ P Q VVE+LG+YLI G
Sbjct: 91 GAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLIEQG 133
>At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to
SP|Q9FE63 Profilin 5 {Arabidopsis thaliana}
Length = 168
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +2
Query: 56 MSWQDYVDKQLM---ASRCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 223
MSWQ YVD LM A +T AAI G DG+VWA+S F ++ +E+ I F L
Sbjct: 38 MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97
Query: 224 TSGGVTIAGTRYIYLSGTDHII 289
G+ + G +Y+ + G + +
Sbjct: 98 APTGLFLGGNKYMVIQGEPNAV 119
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 301 GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 429
G GV KT A+V +Y+EP+ P Q VVE LGEYLI G
Sbjct: 125 GAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESG 167
>At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to
profilin 3 SP:Q38904 GI:1353765 from [Arabidopsis
thaliana]
Length = 134
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Frame = +2
Query: 56 MSWQDYVDKQLMAS------RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENE 214
MSWQ YVD+ LM +T AAI GHDG+VWA+S F + E + I+ F+
Sbjct: 1 MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60
Query: 215 SLLTSGGVTIAGTRYIYLSG 274
L G+ +AG +Y+ + G
Sbjct: 61 GHLAPTGLFMAGAKYMVIQG 80
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 301 GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 429
G G+ KT Q+ V +YEEP+ P Q VVE+LG+YL+ G
Sbjct: 91 GAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLLEQG 133
>At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identical
to profilin 2 SP:Q42418 GI:1353772 from [Arabidopsis
thaliana]; identical to cDNA profilin (PRF2) GI:9965570
Length = 131
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +2
Query: 56 MSWQDYVDKQLMAS---RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 223
MSWQ YVD LM +T AAI G DG+VWA+S F ++ E+A I FE L
Sbjct: 1 MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60
Query: 224 TSGGVTIAGTRYIYLSG 274
G+ + G +Y+ + G
Sbjct: 61 APTGLFLGGEKYMVVQG 77
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 301 GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 429
G GV KT QA+V +Y+EP+ Q VVE+LG+YLI G
Sbjct: 88 GPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVERLGDYLIESG 130
>At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / allergen
Ara t 8 identical to profilin 1 (Allergen Ara t 8)
SP:Q42449 GI:1353770 from [Arabidopsis thaliana]
Length = 131
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +2
Query: 56 MSWQDYVDKQLMAS---RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 223
MSWQ YVD LM +T AAI G DG+VWA+S F ++ E+ I FE L
Sbjct: 1 MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60
Query: 224 TSGGVTIAGTRYIYLSG 274
G+ + G +Y+ + G
Sbjct: 61 APTGLFLGGEKYMVIQG 77
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 301 GKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLI 420
G GV KT QA+V Y+EP+ Q VVE+LG+YLI
Sbjct: 88 GPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLI 127
>At1g78830.1 68414.m09189 curculin-like (mannose-binding) lectin
family protein similar to S glycoprotein [Brassica rapa]
GI:2351186; contains Pfam profile PF01453: Lectin
(probable mannose binding)
Length = 455
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 305 LPSSRG*YGLCH*GRCSACP 246
LPS G YG C G C+ACP
Sbjct: 334 LPSFCGDYGYCDRGMCNACP 353
>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA11)
identical to SP|Q9M2L4|ACAB_ARATH Potential
calcium-transporting ATPase 11, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
thaliana}; strong similarity to calmodulin-stimulated
calcium-ATPase [Brassica oleracea] GI:1805654
Length = 1025
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 387 CGLLRLDGFFIERNDHSLLCLHAMHADLAKFARMIWSVPL 268
CG+L G IE +D L H M A L K M S+PL
Sbjct: 686 CGILTAGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPL 725
>At1g16900.1 68414.m02047 curculin-like (mannose-binding) lectin
family protein very low similarity to Ser Thr protein
kinase GI:2598067 from (Zea mays); contains Pfam lectin
(probable mannose binding) domain PF01453
Length = 919
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 305 LPSSRG*YGLCH*GRCSACPL 243
LPS G +G+C +C ACPL
Sbjct: 279 LPSKCGAFGICEDNQCVACPL 299
>At1g12530.1 68414.m01451 hypothetical protein ; expression
supported by MPSS
Length = 192
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 640 RIKRVQNPQNNHMCTLNSSH*LRRHNLSNIKTNERSSYHFIE 515
R+K ++ +NN + + S L+RH N+KT + S F E
Sbjct: 32 RLKENEDLRNNMISVVKESTSLKRHGAQNMKTRQLSDAIFEE 73
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 149 KSEGFEISKDEVAKIVAGFENESLLTSGGV 238
K+ GF+I DE+ IV G + + L GGV
Sbjct: 90 KAAGFDICADELGSIVEGHDVKKLKFHGGV 119
>At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 559
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 288 MIWSVPLR*M*RVPAIVTPPLVSSDSFSKPATI 190
+IW++ L +P I+T P+VS D +SKP +
Sbjct: 307 VIWAITLPL--NLPRILTIPVVSEDKWSKPLAV 337
>At4g15370.1 68417.m02349 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650208]
[PMID:11247608]
Length = 759
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 618 GFWTLFIRSPSPQNNYYC-IMN*ICIKILLLLTSHSE 725
G W L + SPS N +C ++N IC++IL + H +
Sbjct: 164 GGWGLHVESPS---NMFCSVINYICLRILGVEAGHDD 197
>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
to SP|O22218 Calcium-transporting ATPase 4, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
{Arabidopsis thaliana}
Length = 1030
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 149 KSEGFEISKDEVAKIVAGFENESLLTSGGV 238
K GF I DE+A +V + +SL GGV
Sbjct: 89 KKAGFSIEADELASMVRKNDTKSLAQKGGV 118
>At4g37390.1 68417.m05294 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 603
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 32 YF*LNLIKMSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFEN 211
YF +NL M V +M + + HDG+ A++ E S E+A + G E
Sbjct: 344 YFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEASLDETSLVELANVEVGKEY 403
Query: 212 ESLLTS 229
E ++T+
Sbjct: 404 ELVITT 409
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,956,886
Number of Sequences: 28952
Number of extensions: 328373
Number of successful extensions: 669
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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