Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00780
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 103 2e-22
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 91 9e-19
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 83 2e-16
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 82 4e-16
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 75 5e-14
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 71 8e-13
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 67 2e-11
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 64 9e-11
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 56 3e-08
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 46 4e-05
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 45 8e-05
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 40 0.002
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 40 0.002
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557... 37 0.021
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 32 0.46
03_02_0211 - 6436275-6436361,6436969-6437235,6438475-6438543,643... 32 0.61
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 103 bits (247), Expect = 2e-22
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN + YGLAA VFT+ LD AN + LR GT+WVN Y+VF VPFGG+K SG+GRE G
Sbjct: 502 ANATPYGLAAGVFTQRLDAANTLARALRVGTVWVNTYDVFDAAVPFGGYKMSGVGREKGV 561
Query: 183 YGLRNYLEVKAVVVKLAD 236
Y LRNYL+ KAVV + D
Sbjct: 562 YSLRNYLQTKAVVTPIKD 579
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 91.1 bits (216), Expect = 9e-19
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN S+YGLAA VFT +L+ AN + LR GT+WVN ++VF +PFGG+KQSG+GRE G
Sbjct: 468 ANASQYGLAAGVFTNNLNTANTLTRALRVGTVWVNCFDVFDAAIPFGGYKQSGIGREKGI 527
Query: 183 YGLRNYLEVKA 215
L+NYL++ A
Sbjct: 528 DSLKNYLQICA 538
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 83.4 bits (197), Expect = 2e-16
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN ++YGLAA + TK+L+ AN + +RAGT+WVN Y F PFGG+K SG GR+ G
Sbjct: 434 ANCTKYGLAAGIVTKNLNIANMVSRSVRAGTVWVNCYFAFDPDAPFGGYKMSGFGRDQGM 493
Query: 183 YGLRNYLEVKAVVVKLAD 236
+ YL+VK V+ + D
Sbjct: 494 VAMDKYLQVKTVITAVPD 511
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 82.2 bits (194), Expect = 4e-16
Identities = 38/76 (50%), Positives = 49/76 (64%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN++ YGLAA + TK++D AN + +RAG IW+N Y F VPFGG+K SG G++ G
Sbjct: 385 ANSTRYGLAAGIVTKNIDVANTVSRSIRAGAIWINCYLGFDPDVPFGGYKMSGFGKDMGM 444
Query: 183 YGLRNYLEVKAVVVKL 230
L YL KAVV L
Sbjct: 445 DALEKYLHTKAVVTPL 460
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 75.4 bits (177), Expect = 5e-14
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN + YGLAA + T+D+D AN + +RAG +WVN Y PFGG K SG G+++
Sbjct: 445 ANGTRYGLAAGLVTRDIDVANRMARSIRAGVVWVNCYFAMDRSCPFGGRKMSGFGKDDSM 504
Query: 183 YGLRNYLEVKAVV 221
+ L +L VK+VV
Sbjct: 505 HALDKFLAVKSVV 517
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN++ YGLA AV + DL++ + +++G +W+N Q P+GG K+SG GRE G
Sbjct: 416 ANDTHYGLAGAVISNDLERCERISKAIQSGIVWINCSQPCFVQAPWGGNKRSGFGRELGQ 475
Query: 183 YGLRNYLEVKAVVVKLADK 239
+GL NYL VK V +D+
Sbjct: 476 WGLDNYLSVKQVTKYCSDE 494
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN++ YGLA AV + D ++ + + AG IWVN Q P+GG K+SG GRE G
Sbjct: 435 ANDTHYGLAGAVLSGDRERCQRLTEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGE 494
Query: 183 YGLRNYLEVKAVVVKLADK 239
G+ NYL VK V +D+
Sbjct: 495 GGIDNYLSVKQVTEYASDE 513
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN++ GLAA +FTK + ++ + L G + VN+ + PFGG KQSGLGRE
Sbjct: 478 ANDTNAGLAAYIFTKSIPRSWRVSEALEYGLVGVNEGIISTEVAPFGGVKQSGLGREGSK 537
Query: 183 YGLRNYLEVKAVV 221
YG+ YLEV +
Sbjct: 538 YGMDEYLEVSIAI 550
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDY--NVFGNQVPFGGFKQSGLGREN 176
AN+S+YGL AVF+ + +A L G +ND+ + +PFGG K SG GR
Sbjct: 431 ANDSKYGLGCAVFSGNQKRAIKIASQLHCGVAAINDFASSYMCQSLPFGGVKDSGFGRFA 490
Query: 177 GPYGLRNYLEVKAVV 221
G GLR VKAVV
Sbjct: 491 GVEGLRACCLVKAVV 505
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 46.0 bits (104), Expect = 4e-05
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNV-FGNQ-VPFGGFKQSGLGRENG 179
N+ LAA +FTKD + + AG + VND V NQ +PFGG +SG+G +G
Sbjct: 346 NSMTKALAAYLFTKDSKLQEQYEAAISAGGMLVNDTAVHLTNQYLPFGGVGESGMGAYHG 405
Query: 180 PYGLRNYLEVKAVVVK 227
+ + KAV+V+
Sbjct: 406 RFSFEAFSHKKAVLVR 421
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 44.8 bits (101), Expect = 8e-05
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDY--NVFGNQVPFGGFKQSGLGRENG 179
N+ LAA +FTKD FV + AG + VND ++ +PFGG SG+G +G
Sbjct: 375 NSRTKPLAAYLFTKDKKLQEEFVSNVPAGGMLVNDVALHLANPHLPFGGVGDSGIGSYHG 434
Query: 180 PYGLRNYLEVKAVVVK 227
+ + KAV+++
Sbjct: 435 KFSFDCFTHKKAVLIR 450
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVND----------YNVFGNQVPFG--GF 149
N S +GL VFTKD++KA + GT+ +N + +F + FG G
Sbjct: 416 NASNFGLQGCVFTKDINKAIMISDAMETGTVQINSAPARGPDHFPFQLFVISMGFGLQGL 475
Query: 150 KQSGLGRENGPYGLRNYLEVKAVVVKL 230
K SG+G + + +VK+ V+ L
Sbjct: 476 KDSGIGSQGITNSINMMTKVKSTVINL 502
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 24 LAAAVFTKDLDKANYFVQMLRAGTIWVNDYNV-FG-NQVPFGGFKQSGLGRENGPYGLRN 197
LA FTK+ V+ +G++ ND V +G + +PFGG +SG G+ +G Y
Sbjct: 380 LAVYAFTKNAALRRRIVEETSSGSVTFNDAVVQYGIDSLPFGGVGESGFGQYHGKYSFEM 439
Query: 198 YLEVKAVVVK 227
+ KAV+ +
Sbjct: 440 FSHKKAVLTR 449
>02_05_0127 -
26053055-26053306,26055415-26055564,26055657-26055747,
26055835-26055995,26056455-26056579,26056680-26056886,
26056936-26056996
Length = 348
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 24 LAAAVFTKDLDKANYFVQMLRAGTIWVNDYNV-FG-NQVPFGGFKQSGLGRENGPYGLRN 197
LA FT + V +G++ ND V +G + VPFGG +SG G+ +G Y
Sbjct: 233 LAIYAFTNNEKLKQRIVAETSSGSVLFNDAIVQYGLDSVPFGGIGESGFGQYHGKYTFEL 292
Query: 198 YLEVKAVV 221
+ KAVV
Sbjct: 293 FSHRKAVV 300
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 24 LAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFG--NQVPFGGFKQSGLGRENGPYGLRN 197
+A FT + V+ +G++ ND V VPFGG SG G+ +G Y
Sbjct: 308 IAMYAFTNNERLKRRIVEETSSGSVTFNDAVVQYALESVPFGGVGHSGFGQYHGKYSFEL 367
Query: 198 YLEVKAV 218
+ KAV
Sbjct: 368 FSHKKAV 374
>03_02_0211 -
6436275-6436361,6436969-6437235,6438475-6438543,
6439108-6439236,6439319-6439480,6439558-6439678,
6439813-6439928,6440697-6440762,6441010-6441091,
6441236-6441327,6441430-6441537,6441919-6442013,
6442092-6442234,6442336-6442364,6442452-6442571,
6442645-6442734,6443116-6443181,6443267-6443380,
6443482-6443574
Length = 682
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = -3
Query: 151 LKPPKGTWFPNTL*SLTQMVPARSICTK*L-------ALSRSLVKTAAASPYSELL 5
L+P K TW TL L ++P +S K L S +L +T++ +PYS++L
Sbjct: 544 LEPGKHTWLLKTLYGLLMLLPQQSAAFKILRTRLKTVPFSENLKRTSSTNPYSQIL 599
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,668,931
Number of Sequences: 37544
Number of extensions: 315600
Number of successful extensions: 605
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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