Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00780
(801 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 74 2e-13
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 71 1e-12
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 62 5e-10
SB_10851| Best HMM Match : Chitin_bind_1 (HMM E-Value=4.4) 57 1e-08
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 56 3e-08
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_42840| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 30 2.5
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 4.4
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN +EYGLA+ VFTKD+ KA L AGT +VN YN PFGG KQSG G++ G
Sbjct: 184 ANGTEYGLASGVFTKDMSKALRVADALEAGTCFVNTYNKTDVAAPFGGCKQSGFGKDLGM 243
Query: 183 YGLRNYLEVKAVVVK 227
L YL+ K + ++
Sbjct: 244 EALNEYLKTKVITIE 258
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 73.7 bits (173), Expect = 2e-13
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRE 173
ANN+ +GLA +FT+DL++A+ + L+AGT W+N +N+ +VPFGG+K SG GRE
Sbjct: 675 ANNTTFGLAGGIFTRDLNRAHRVIGSLQAGTCWINSFNITPVEVPFGGYKMSGFGRE 731
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN + YGLA +V TK+L+ A LR GT+WVN Y+ Q PFGG+K SG+GRE P
Sbjct: 152 ANKTTYGLAGSVMTKNLENALMLSNSLRVGTVWVNCYDALSAQAPFGGYKMSGVGRELSP 211
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
ANN+ +GL A+V+T++L A ++AG +W+N +N+F FGG+++SG GR+ G
Sbjct: 1026 ANNTNFGLGASVWTENLSLAMEVGLSMKAGAVWINGHNLFDAAAGFGGYRESGYGRDGGK 1085
Query: 183 YGLRNYL 203
GL Y+
Sbjct: 1086 EGLYEYV 1092
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN+++ GLA +++DL + + L G + VN+ + PFGG+KQSGLG E
Sbjct: 404 ANSTQSGLAGYFYSQDLSQVWRVAEALEVGLVGVNESMISTEVAPFGGWKQSGLGIEGSR 463
Query: 183 YGLRNYLEVKAVVVKLA 233
YG+ YLE K ++++
Sbjct: 464 YGIHEYLETKLFQIRMS 480
>SB_10851| Best HMM Match : Chitin_bind_1 (HMM E-Value=4.4)
Length = 186
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRE 173
AN S+YGL+ V++ DL+KA LR G + +N V + PFGG+KQSGLGRE
Sbjct: 13 ANQSDYGLSGGVWSADLEKAKQVAAKLRTGMVHLNGAMV-DARAPFGGYKQSGLGRE 68
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN + +GLA+ ++++ + L+ G + +N + VPFGG K SG GRE
Sbjct: 343 ANKTRFGLASYFYSQNTSRVFNIADELQYGIVGINSGLISAENVPFGGVKHSGFGREGSF 402
Query: 183 YGLRNYLEVKAVVVKL 230
YGL +Y+ +K V + +
Sbjct: 403 YGLDDYINIKYVCLDI 418
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWV 104
ANN+ YGLAA VFTK++D A LRAGT+WV
Sbjct: 728 ANNTTYGLAAGVFTKNIDTAIAVSSGLRAGTVWV 761
>SB_42840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 87 AGTIWVNDYNVFGNQVPFGGFKQSGLGRENGPYGLRNYLEVKAVVVKL 230
AGT+W N + V +PFGG K SG+GRE L + E K + +K+
Sbjct: 15 AGTVWCNCWLVRDLNMPFGGTKMSGVGREGTHESLEFFTESKTICIKM 62
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFG--NQVPFGGFKQSGLGRENG 179
N+ + LA +F+ + + +G ND + +PFGG SG+G +G
Sbjct: 324 NDRDKPLALYIFSNKQESIKRIQENTSSGGFCANDVVIHAALETLPFGGVGGSGMGAYHG 383
Query: 180 PYGLRNYLEVKAVVVK 227
+ + K +VK
Sbjct: 384 KHSFEAFTHKKGCMVK 399
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAG 92
N + YGL+A++++KD +A+ Q +RAG
Sbjct: 421 NVTAYGLSASIWSKDGQRAHRLAQRIRAG 449
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 4 PTTRSTDWPPLSSLKI*TRPTTSYRCCAPAPFGLTTTTYSGT 129
PTT +T PP ++ T+PTT+ P TTTT GT
Sbjct: 89 PTTPTTTTPPATTTP--TKPTTTTPPATTTPTKPTTTTPPGT 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,479,061
Number of Sequences: 59808
Number of extensions: 357792
Number of successful extensions: 570
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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