Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00780
(801 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 101 6e-22
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 100 1e-21
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 77 1e-14
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 77 2e-14
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 73 3e-13
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 64 1e-10
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 54 8e-08
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 54 8e-08
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 50 1e-06
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 50 1e-06
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 44 9e-05
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 38 0.006
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 38 0.006
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 38 0.010
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 28 6.3
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 101 bits (242), Expect = 6e-22
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
ANNS YGLAA VFT++LD A+ ++ LR GT+W+N ++V +PFGG+K SG+GRE G
Sbjct: 453 ANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGI 512
Query: 183 YGLRNYLEVKAVVVKL 230
Y L NYL+VKAVV L
Sbjct: 513 YSLNNYLQVKAVVTSL 528
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 100 bits (239), Expect = 1e-21
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN ++YGLAA VFTK+LD AN + L+AGT+WVN ++VF +PFGG+K SG GRE G
Sbjct: 457 ANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGI 516
Query: 183 YGLRNYLEVKAVVVKL 230
Y L NYL++KAVV L
Sbjct: 517 YSLNNYLQIKAVVTAL 532
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/76 (47%), Positives = 51/76 (67%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
ANN++YGLAA + ++D+D N + ++AG IWVN Y F P+GG+K SG RE+G
Sbjct: 420 ANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGM 479
Query: 183 YGLRNYLEVKAVVVKL 230
L NYL+ K+VV+ L
Sbjct: 480 DALDNYLQTKSVVMPL 495
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN+S+YGLA AV + DL++ + + +AG +WVN Q P+GG K+SG GRE G
Sbjct: 414 ANDSQYGLAGAVLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGE 473
Query: 183 YGLRNYLEVKAVVVKLADK 239
+GL NYL VK V ++D+
Sbjct: 474 WGLENYLSVKQVTQYISDE 492
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN+S YGL AAV + D ++ + + AG +W+N Q P+GG K+SG GRE G
Sbjct: 414 ANDSHYGLGAAVISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGRELGE 473
Query: 183 YGLRNYLEVKAVVV 224
+GL NYL VK V +
Sbjct: 474 WGLDNYLSVKQVTL 487
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/80 (42%), Positives = 46/80 (57%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFGNQVPFGGFKQSGLGRENGP 182
AN++ GLAA +FT + ++ + L G + VN+ + PFGG KQSGLGRE
Sbjct: 449 ANDTIAGLAAYIFTNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 508
Query: 183 YGLRNYLEVKAVVVKLADKN 242
YG+ YLE+K V L D N
Sbjct: 509 YGMDEYLEIKYVC--LGDMN 526
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDY--NVFGNQVPFGGFKQSGLGREN 176
AN+S Y L AVF+ +A ++ G +ND+ N +PFGG K SG GR
Sbjct: 454 ANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFA 513
Query: 177 GPYGLRNYLEVKAVV 221
G GLR VK+VV
Sbjct: 514 GIEGLRACCLVKSVV 528
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 ANNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDY--NVFGNQVPFGGFKQSGLGREN 176
AN+S Y L AVF+ +A ++ G +ND+ N +PFGG K SG GR
Sbjct: 454 ANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFA 513
Query: 177 GPYGLRNYLEVKAVV 221
G GLR VK+VV
Sbjct: 514 GIEGLRACCLVKSVV 528
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFG-NQVPFGGFKQSGLGRENGP 182
N S +GL VFTKD++KA + GT+ +N G + PF G K SG+G +
Sbjct: 413 NASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGVT 472
Query: 183 YGLRNYLEVKAVVVKL 230
+ +VK V+ L
Sbjct: 473 NSINLMTKVKTTVINL 488
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFG-NQVPFGGFKQSGLGRENGP 182
N S +GL VFTKD++KA + GT+ +N G + PF G K SG+G +
Sbjct: 413 NASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGVT 472
Query: 183 YGLRNYLEVKAVVVKL 230
+ +VK V+ L
Sbjct: 473 NSINLMTKVKTTVINL 488
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 24 LAAAVFTKDLDKANYFVQMLRAGTIWVND--YNVFGNQVPFGGFKQSGLGRENGPYGLRN 197
LAA +FT + + FVQ + AG I +ND +V +PFGG +SG+G +G +
Sbjct: 438 LAAYLFTNNKELEKQFVQDVSAGGITINDTVLHVTVKDLPFGGVGESGIGAYHGKFSYET 497
Query: 198 YLEVKAVVVK 227
+ K V+ +
Sbjct: 498 FSHKKGVLYR 507
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 24 LAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFG--NQVPFGGFKQSGLGRENGPYGLRN 197
LAA +FT + F + AG I VND V + +PFGG +SG+G +G +
Sbjct: 375 LAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDA 434
Query: 198 YLEVKAVVVK 227
+ KAV+ +
Sbjct: 435 FSHKKAVLYR 444
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 24 LAAAVFTKDLDKANYFVQMLRAGTIWVNDYNVFG--NQVPFGGFKQSGLGRENGPYGLRN 197
LAA +FT + F + AG I VND V + +PFGG +SG+G +G +
Sbjct: 375 LAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDA 434
Query: 198 YLEVKAVVVK 227
+ KAV+ +
Sbjct: 435 FSHKKAVLYR 444
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVNDYNV--FGNQVPFGGFKQSGLGRENG 179
N LA FT D + + +G++ ND + + +PFGG +SG+GR +G
Sbjct: 368 NTKPKPLAIYAFTNDENLKTRILSETSSGSVTFNDVMIQYMCDALPFGGVGESGIGRYHG 427
Query: 180 PYGLRNYLEVKAVV 221
Y + KA++
Sbjct: 428 KYSFDCFSHEKAIM 441
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 28.3 bits (60), Expect = 6.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 6 NNSEYGLAAAVFTKDLDKANYFVQMLRAGTIWVN-DYNVFGNQVPFGGFKQSGLGREN-- 176
N ++YG AA+FT A F + AG I +N V F G K S G N
Sbjct: 513 NKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFY 572
Query: 177 GPYGLRNYLEVKAVVVKLAD 236
G G+ + ++K V + D
Sbjct: 573 GKAGVDFFTQIKTVTQQWKD 592
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,443,888
Number of Sequences: 28952
Number of extensions: 258779
Number of successful extensions: 455
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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