Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00779
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.9  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    24   5.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.8  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -2

Query: 215  FRTFAHWLCFRTNF--TAGLTKLFTNVIEAMLNEL-FNTKRC*ILNFQKFRLIFVWIF 51
            FR F HWLC  + F     +  +F++ + A  + L  N++R  ILN+  F   F  +F
Sbjct: 845  FRIFCHWLCNHSTFGNIILVCIMFSSAMLAAEDPLNANSERNQILNY--FDYFFTSVF 900


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 260 LEIILNGVNPDRTVVF 213
           LE ILNG NP  T+VF
Sbjct: 414 LEEILNGGNPKGTLVF 429


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 521 HADYIKNMITGTAQM 565
           HADY++ +I GTA +
Sbjct: 197 HADYLQQLIEGTADV 211


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 189  AKPVCKCTKHNSPVRIDSIKYNLKRHYAEKQIFERTKP 302
            A P    TK +    + +I +  +    E +IFE TKP
Sbjct: 1391 AVPFKLLTKKSRDQALKAINFIEREQQQEMEIFEETKP 1428


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,116
Number of Sequences: 2352
Number of extensions: 15843
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)