Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00779
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 129 2e-30
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 129 2e-30
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 129 2e-30
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 123 1e-28
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 123 1e-28
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 70 2e-12
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 70 2e-12
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 60 2e-09
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 48 6e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 47 2e-05
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 39 0.003
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 39 0.003
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 38 0.006
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 38 0.008
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 34 0.096
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 34 0.096
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.13
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.13
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.29
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 32 0.51
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 31 1.2
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 30 1.6
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 28 6.3
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 28 6.3
AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine re... 28 6.3
Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical pr... 28 8.3
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 129 bits (311), Expect = 2e-30
Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 3/87 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGI--QHVVVFINKV 682
DCPGHADYIKNMITG AQM+GAILVVAATDG MPQTREHLLLA+Q+G+ ++VVF+NKV
Sbjct: 118 DCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVGVPLDNIVVFMNKV 177
Query: 683 D-AADEEMVELVEMEIRELMTEMGYDG 760
D D E ELVEM+IRE + E GY G
Sbjct: 178 DEVPDAETRELVEMDIREQLNEFGYPG 204
Score = 120 bits (289), Expect = 1e-27
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = +3
Query: 276 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 455
K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGIT
Sbjct: 40 KAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGIT 99
Query: 456 INVAHVEYQTEQRHYGH 506
IN H+EY+T +RHY H
Sbjct: 100 INAFHLEYETAKRHYAH 116
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 129 bits (311), Expect = 2e-30
Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 3/87 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGI--QHVVVFINKV 682
DCPGHADYIKNMITG AQM+GAILVVAATDG MPQTREHLLLA+Q+G+ ++VVF+NKV
Sbjct: 119 DCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVGVPLDNIVVFMNKV 178
Query: 683 D-AADEEMVELVEMEIRELMTEMGYDG 760
D D E ELVEM+IRE + E GY G
Sbjct: 179 DEVPDAETRELVEMDIREQLNEFGYPG 205
Score = 120 bits (289), Expect = 1e-27
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = +3
Query: 276 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 455
K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGIT
Sbjct: 41 KAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGIT 100
Query: 456 INVAHVEYQTEQRHYGH 506
IN H+EY+T +RHY H
Sbjct: 101 INAFHLEYETAKRHYAH 117
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 129 bits (311), Expect = 2e-30
Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 3/87 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGI--QHVVVFINKV 682
DCPGHADYIKNMITG AQM+GAILVVAATDG MPQTREHLLLA+Q+G+ ++VVF+NKV
Sbjct: 119 DCPGHADYIKNMITGAAQMEGAILVVAATDGPMPQTREHLLLARQVGVPLDNIVVFMNKV 178
Query: 683 D-AADEEMVELVEMEIRELMTEMGYDG 760
D D E ELVEM+IRE + E GY G
Sbjct: 179 DEVPDAETRELVEMDIREQLNEFGYPG 205
Score = 120 bits (289), Expect = 1e-27
Identities = 53/77 (68%), Positives = 63/77 (81%)
Frame = +3
Query: 276 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 455
K +F+R KPH NVGTIGHVDHGKTTLT+AITK+L+ A+ + Y DIDNAPEEKARGIT
Sbjct: 41 KAVFKRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGIT 100
Query: 456 INVAHVEYQTEQRHYGH 506
IN H+EY+T +RHY H
Sbjct: 101 INAFHLEYETAKRHYAH 117
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 123 bits (297), Expect = 1e-28
Identities = 52/84 (61%), Positives = 73/84 (86%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
DCPGH+D+IKNMI GT+QMD A+LV+AATDGVM QT+EHL+LAKQ+G++++ +FINK D
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAKQVGVKNMAIFINKADL 173
Query: 689 ADEEMVELVEMEIRELMTEMGYDG 760
+E+ ++LVEME REL++ G++G
Sbjct: 174 VEEDDLDLVEMEARELLSLHGFNG 197
Score = 87.8 bits (208), Expect = 7e-18
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +3
Query: 297 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 476
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 477 YQTEQRHYGHT 509
Y++ R Y HT
Sbjct: 103 YESPLRRYSHT 113
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 123 bits (297), Expect = 1e-28
Identities = 52/84 (61%), Positives = 73/84 (86%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
DCPGH+D+IKNMI GT+QMD A+LV+AATDGVM QT+EHL+LAKQ+G++++ +FINK D
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVMEQTKEHLILAKQVGVKNMAIFINKADL 173
Query: 689 ADEEMVELVEMEIRELMTEMGYDG 760
+E+ ++LVEME REL++ G++G
Sbjct: 174 VEEDDLDLVEMEARELLSLHGFNG 197
Score = 87.8 bits (208), Expect = 7e-18
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +3
Query: 297 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVE 476
K + NVGTIGH+DHGKTTLT+AIT+V + A+ + +ID EEK RGITINVAH+
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKRGITINVAHIG 102
Query: 477 YQTEQRHYGHT 509
Y++ R Y HT
Sbjct: 103 YESPLRRYSHT 113
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+LVVA G QTREH LLA+ +G++ ++V
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIV 150
Query: 668 FINKVDAADEEMVEL----VEMEIRELMTEMGYD 757
NK+D+ + E + E+ + ++GY+
Sbjct: 151 ACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYN 184
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 425
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+LVVA G QTREH LLA+ +G++ ++V
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIV 150
Query: 668 FINKVDAADEEMVEL----VEMEIRELMTEMGYD 757
NK+D+ + E + E+ + ++GY+
Sbjct: 151 ACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYN 184
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 425
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+I NMITGT+Q D AILVV AT G QT+EH LL + +G+ ++V
Sbjct: 254 DAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIV 313
Query: 668 FINKVDAAD 694
+NK+D D
Sbjct: 314 AVNKLDTVD 322
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKA 443
N+ +GHVD GK+TL + L ++ A + G A +D EE+
Sbjct: 172 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 231
Query: 444 RGITINVAHVEYQTEQR 494
RG+T+++ ++T R
Sbjct: 232 RGVTMDIGRTSFETSHR 248
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+I NMITGT+Q D AILVV AT G QT+EH LL + +G+ ++V
Sbjct: 272 DAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIV 331
Query: 668 FINKVDAAD 694
+NK+D D
Sbjct: 332 AVNKLDTVD 340
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKGYAD------IDNAPEEKA 443
N+ +GHVD GK+TL + L ++ A + G A +D EE+
Sbjct: 190 NLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 249
Query: 444 RGITINVAHVEYQTEQR 494
RG+T+++ ++T R
Sbjct: 250 RGVTMDIGRTSFETSHR 266
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
DCPGH+ I+ ++ + D AI+++ G+ PQT EHLLLA + V++ +NK D
Sbjct: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKCDL 137
Query: 689 ADEEMVELVEMEIRELMTEMGYD 757
A++ + ++R+ + MG D
Sbjct: 138 AEKSKISESAKKVRKGLKSMGVD 160
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKV 374
N+G +GHVD GKTTLT I ++
Sbjct: 15 NLGILGHVDSGKTTLTRRIAEL 36
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH ++ NMI G Q D A+LV++A G QTREH +L K G++H+V+
Sbjct: 193 DAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVI 252
Query: 668 FINKVDAA----DEEMVELVEMEIRELMTEMGYD 757
+NK+D +EE + +E ++ + ++G++
Sbjct: 253 LVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFN 286
Score = 37.5 bits (83), Expect = 0.010
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 23/128 (17%)
Frame = +3
Query: 186 EAKPVCKCTKHNSPVRIDSIKYNLKRHYAEKQIFERT--------KPHCNVGTIGHVDHG 341
E+ PV + +P + + + +L A+K F+RT K H N+ +GHVD G
Sbjct: 64 ESAPVAPVSATEAPKKEPTPEEDLVAPLAKK--FQRTVYVDDGTHKEHINMVFVGHVDAG 121
Query: 342 KTTLTAAI---TKVLSDLNL------AQKKGYAD------IDNAPEEKARGITINVAHVE 476
K+T+ + T ++ L A++KG +D EE+ +G T+ V
Sbjct: 122 KSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAY 181
Query: 477 YQTEQRHY 500
++TE+RH+
Sbjct: 182 FETEKRHF 189
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 7/59 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVV 664
D PGH D+IKNMITGT+Q D A+LVVA G QTREH LLA+ +G++ +V
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLV 149
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 425
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVVFINKVD 685
DCPGH + M+ G A MD A L+VA + PQT EHL + + + H+++ NKVD
Sbjct: 133 DCPGHDILMATMLNGAAVMDAAFLLVAGNEPCPQPQTSEHLAAVEIMQLNHLMILQNKVD 192
Query: 686 AADE 697
E
Sbjct: 193 IIKE 196
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 416
N+GTIGHV HGK+TL A + V + + N+ K GYA+
Sbjct: 42 NIGTIGHVAHGKSTLVKAFSGVHTVKFKRELERNITIKLGYAN 84
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGHA + G D +LVVAA DGV QT + + AK +Q +VV +NK+D
Sbjct: 210 DTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDANVQ-LVVAVNKID 267
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 270 AEKQIFERTKPHCNVGTIGHVDHGKTTLTAAI 365
A + ER P + +GHVDHGKTTL A+
Sbjct: 147 ASPKDLERRPPIVTI--MGHVDHGKTTLLDAM 176
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.4 bits (110), Expect = 6e-06
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH D+ + A DG +L+VAA GV QT + LA + IQ ++ INK+D
Sbjct: 108 DTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFEKNIQ-IIPVINKIDL 166
Query: 689 ADEEMVELVEMEIREL 736
+ ++ VE +++ L
Sbjct: 167 PGAD-IKSVETQLKNL 181
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 458
N G + HVDHGK+TL + ++ + QK+ +D E+ RGIT+
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQ---MLDKLQVERERGITV 90
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVA 589
D PGH D+IKNMITGT+Q D A+LVVA
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 425
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDG--AILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKV 682
D G A Y K I G A LVVAA G+ TREHL L + I + V I K+
Sbjct: 255 DLAGDAKYQKTTIHGLTGYTPHFACLVVAADRGITWATREHLGLIAALNIP-MFVLITKM 313
Query: 683 DAADEEMVELVEMEIRELMTEMG 751
D D + ++ + ++ L+ + G
Sbjct: 314 DLVDRQGLKKIIKDVSNLVAKAG 336
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH D+ + DGA++VV GV QT L A I+ V+F+NK+D
Sbjct: 116 DSPGHVDFSSEVTAALGVTDGALVVVDCVSGVCVQTETVLRQAIAERIK-PVLFMNKMDR 174
Query: 689 A 691
A
Sbjct: 175 A 175
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 276 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 455
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 456 I 458
I
Sbjct: 70 I 70
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH D+ + DGA++VV GV QT L A I+ V+F+NK+D
Sbjct: 116 DSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIK-PVLFMNKMDR 174
Query: 689 A 691
A
Sbjct: 175 A 175
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +3
Query: 276 KQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGIT 455
+ + +R + N+ I HVDHGK+TLT ++ + ++ D +E+ R IT
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCIT 69
Query: 456 I 458
I
Sbjct: 70 I 70
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNLA--QKKGYADIDNAPEEKARGITINVAHV 473
N+G I HVD GKTT+T + + +++A KG D E+ RGIT+ A V
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAV 83
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD- 685
D PGH D+ + +DG ++V+ + GV PQT + + + FINK+D
Sbjct: 96 DTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQSSKFKLP-AHFFINKMDK 154
Query: 686 -AAD-EEMVELVEMEI 727
AA+ E V+ VE ++
Sbjct: 155 LAANFENSVDSVEQKL 170
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHL-LLAKQIGIQHVVVFINKVD 685
D PGH + G++ D AILVV G+ PQT E L LL K G V+ +NK+D
Sbjct: 555 DTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQTIESLKLLIK--GKTPFVIALNKID 612
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV--VVFINKV 682
D PGH D+ + +DGA+LV+ GV QT + +Q+ +V + F+NK+
Sbjct: 118 DTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQT---FTVNRQLARYNVPFICFVNKM 174
Query: 683 D 685
D
Sbjct: 175 D 175
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADI----DNAPEEKARGITINVA 467
N+G H+D GKTT+T I + ++ + +G D+ D E+ RGITI A
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSA 103
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH D+ + + D A+L++ +G+ QT + + G Q +++ INK+D
Sbjct: 89 DSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNG-QAMILVINKIDR 147
Query: 689 ADEEM 703
E+
Sbjct: 148 LRVEL 152
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 488
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH D+ + + D A+L++ +G+ QT + + G Q +++ INK+D
Sbjct: 89 DSPGHVDFSGEVTSALILSDIALLLIDVIEGICSQTEALIRQVIRNG-QAMILVINKIDR 147
Query: 689 ADEEM 703
E+
Sbjct: 148 LRVEL 152
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINVAHVEYQTE 488
NV + HVDHGKT+ ++ + ++ +D+ +E+ RGIT+ + + E
Sbjct: 22 NVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGITMKSSGISLLCE 81
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH ++ M DG +++V A +GVM T + A Q + V + I+K+D
Sbjct: 207 DTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHAIQERLA-VTLCISKID 264
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH ++ M DG +++V A +GVM T + A Q + V + I+K+D
Sbjct: 82 DTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMMNTERAIRHAIQERLA-VTLCISKID 139
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKV 374
N+G +GHVD GKTTLT I ++
Sbjct: 15 NLGILGHVDSGKTTLTRRIAEL 36
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 626 LLLAKQIGIQHVVVFINKVDAADEEMVELVEMEIRELMTEMG 751
LLL+ GI+HV F+NK+ + + E E + + LM +G
Sbjct: 410 LLLSIPDGIEHVTAFMNKIYECNSPVDEKFESQFKTLMLNVG 451
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical protein
F21G4.2 protein.
Length = 1573
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 240 SIKYNLKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 377
S +Y + KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1340 SARYRPGLNLVVKQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 240 SIKYNLKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVL 377
S +Y + KQ+ KPH VG +G GK+++T ++ +++
Sbjct: 1340 SARYRPGLNLVVKQLNVEIKPHEKVGIVGRTGAGKSSVTLSLFRII 1385
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLT 356
+ K H N+ IGHVD GK+T T
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTT 24
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 512 CPGHADYI--KNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
C G D + K I +M ++ ++ TD + E L K+I ++ VFI K
Sbjct: 729 CEGMEDELEEKENIVKMEEMTKSVTEMSLTDNTISFKSEDDLFKKEIKVEEDEVFIKKEI 788
Query: 686 AADEEMVELVEMEIRELM 739
DEE E+VE + E +
Sbjct: 789 DEDEE--EIVEETVIECL 804
>Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical
protein H02I12.3 protein.
Length = 397
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/121 (23%), Positives = 52/121 (42%)
Frame = +1
Query: 109 VLKSSFNMASITFVKSLVSPAVKLVLKQSQCANVRNTTVLSGLTPLSIISRDIMQKNKSL 288
+L + + S ++ S VSP +KL + + T ++SGL S + K SL
Sbjct: 58 ILGNGLIVLSSPWLSSPVSPYLKLCISLAAADMWAATLLISGLIVNSYLPVVTGYKKTSL 117
Query: 289 NVQSPIAMLAQSDMLITGRLHXXXXXLRYYLISIWHRKKVMQILTMPPRRRLEVSLLMWL 468
+ + M S ML T +H + +L +++ K + + T RR + +W
Sbjct: 118 CFDALLEMFRISGML-TSDMHLFALAINQFLGTMYPLKYKIMVTT---RRLRYIVFCLWF 173
Query: 469 M 471
+
Sbjct: 174 V 174
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 367 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 465
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 367 LRYYLISIWHRKKVMQILTMPPRRRLEVSLLMW 465
+R+ +S+W+RK+ Q+L+ P L L W
Sbjct: 172 VRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHW 204
>AF039049-1|AAB94253.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein68 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -2
Query: 206 FAHWLCFRTNFTAGLTKLFTNVIEAMLNELFNTKRC*ILNFQKFRLIFVWIFYNKYIHLF 27
F + L T+F + + F + +FN KR ++ ++F+WIF LF
Sbjct: 84 FCYELSVFTHFAISINRFFAVWMPLKYESMFNIKRT------RWMIVFMWIFIGSIAVLF 137
Query: 26 FR 21
++
Sbjct: 138 YQ 139
>Z71259-4|CAA95788.2| 501|Caenorhabditis elegans Hypothetical
protein F13G3.3 protein.
Length = 501
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1
Query: 145 FVKSLVSPAVKLVLKQSQCANVRNTTVLSGLTPLSIISRDIMQKNKSLNVQSPIAMLAQS 324
+++S+VSP ++++ Q L +++++RD N +LNV+ AQ+
Sbjct: 186 YIRSIVSPMLEILRVYEQ----EGYATLKPWNRINLLNRDEQDFNPNLNVEFRSQAAAQT 241
Query: 325 DMLI 336
D L+
Sbjct: 242 DCLL 245
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,298,235
Number of Sequences: 27780
Number of extensions: 365479
Number of successful extensions: 1101
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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