Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00779
(762 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 74 1e-15
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 74 1e-15
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 74 1e-15
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 74 1e-15
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 48 1e-07
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 37 2e-04
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.8
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.3
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 23 3.1
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 7.1
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 74.1 bits (174), Expect = 1e-15
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L+VAA G QTREH LLA +G++ ++V
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIV 150
Query: 668 FINKVDAAD----EEMVELVEMEIRELMTEMGYD 757
+NK+D D E E ++ E+ + ++GY+
Sbjct: 151 GVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYN 184
Score = 33.1 bits (72), Expect = 0.003
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 425
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 74.1 bits (174), Expect = 1e-15
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L+VAA G QTREH LLA +G++ ++V
Sbjct: 18 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 77
Query: 668 FINKVDAAD----EEMVELVEMEIRELMTEMGYD 757
+NK+D+ + E E ++ E+ + ++GY+
Sbjct: 78 GVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYN 111
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 74.1 bits (174), Expect = 1e-15
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L+VAA G QTREH LLA +G++ ++V
Sbjct: 34 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 93
Query: 668 FINKVDAAD----EEMVELVEMEIRELMTEMGYD 757
+NK+D+ + E E ++ E+ + ++GY+
Sbjct: 94 GVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYN 127
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 74.1 bits (174), Expect = 1e-15
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L+VAA G QTREH LLA +G++ ++V
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 150
Query: 668 FINKVDAAD----EEMVELVEMEIRELMTEMGYD 757
+NK+D+ + E E ++ E+ + ++GY+
Sbjct: 151 GVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYN 184
Score = 33.5 bits (73), Expect = 0.002
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNL---------AQKKG-----YA-DIDN 425
+ K H N+ IGHVD GK+T T + ++ AQ+ G YA +D
Sbjct: 3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQTEQ 491
E+ RGITI++A +++T +
Sbjct: 63 LKAERERGITIDIALWKFETSK 84
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGHA +I G D +LVVAA DGV QT + + +AK + ++V INK+D
Sbjct: 199 DTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVP-IIVAINKIDK 257
Query: 689 ADEEMVEL 712
+ +++++
Sbjct: 258 PNIDIIKV 265
Score = 31.1 bits (67), Expect = 0.012
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 297 KPHCNVGTIGHVDHGKTTLTAAI 365
K H V +GHVDHGKTTL A+
Sbjct: 143 KRHPIVTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 36.7 bits (81), Expect = 2e-04
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKV--LSDLNLAQKKGYADIDNAPEEKARG 449
N+GTIGHV HGK+T+ AI+ V + N ++ +D E+ RG
Sbjct: 44 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLDTRAEDSTRG 92
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 32 NECTYCKISKQKLIGISENLI 94
N C YC++ K +G+S + +
Sbjct: 118 NRCQYCRLKKCIAVGMSRDAV 138
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 538 EHDYRHSTNGWCYISSSC 591
E DY N W YI S C
Sbjct: 298 ESDYYPDLNEWLYILSGC 315
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 32 NECTYCKISKQKLIGISEN 88
N C YC++ K +G+S +
Sbjct: 69 NRCQYCRLKKCIAVGMSRD 87
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 338 VINMSDCANIAMGLCTFKDLFFCIMSLEIILNG 240
++ +DC + TFKD + M +E L G
Sbjct: 419 IMGEADCDFVVKLFKTFKDRKYLYMLMEACLGG 451
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,161
Number of Sequences: 438
Number of extensions: 4408
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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