Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00779
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 126 2e-29
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 122 3e-28
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 66 3e-11
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 66 3e-11
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 66 3e-11
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 66 3e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 61 9e-10
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 61 9e-10
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 60 1e-09
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 60 1e-09
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 60 2e-09
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 60 2e-09
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 52 3e-07
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 47 1e-05
At5g13650.2 68418.m01585 elongation factor family protein contai... 46 2e-05
At5g13650.1 68418.m01584 elongation factor family protein contai... 46 2e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 46 3e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 45 6e-05
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 44 8e-05
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 44 8e-05
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 42 4e-04
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 39 0.003
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 39 0.003
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 39 0.004
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 39 0.004
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.007
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 38 0.010
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 36 0.022
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 36 0.022
At2g31060.1 68415.m03790 elongation factor family protein contai... 36 0.029
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 36 0.029
At2g27700.1 68415.m03356 eukaryotic translation initiation facto... 35 0.051
At4g31370.1 68417.m04448 fasciclin-like arabinogalactan family p... 30 1.9
At3g02210.1 68416.m00202 phytochelatin synthetase family protein... 29 2.6
At1g62860.1 68414.m07098 pentatricopeptide (PPR) repeat-containi... 29 4.5
At1g09790.1 68414.m01098 phytochelatin synthetase-related contai... 28 5.9
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 126 bits (303), Expect = 2e-29
Identities = 55/85 (64%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
DCPGHADY+KNMITG AQMDGAILVV+ DG MPQT+EH+LLAKQ+G+ +VVF+NK D
Sbjct: 148 DCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQ 207
Query: 689 ADE-EMVELVEMEIRELMTEMGYDG 760
D+ E++ELVE+E+REL++ ++G
Sbjct: 208 VDDAELLELVELEVRELLSSYEFNG 232
Score = 112 bits (270), Expect = 2e-25
Identities = 50/74 (67%), Positives = 58/74 (78%)
Frame = +3
Query: 285 FERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITINV 464
FER KPH N+GTIGHVDHGKTTLTAA+T L+ + + K Y +ID APEE+ARGITIN
Sbjct: 73 FERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITINT 132
Query: 465 AHVEYQTEQRHYGH 506
A VEY+TE RHY H
Sbjct: 133 ATVEYETENRHYAH 146
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 122 bits (294), Expect = 3e-28
Identities = 54/85 (63%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
DCPGHADY+KNMITG AQMDG ILVV+ DG MPQT+EH+LLA+Q+G+ +V F+NKVD
Sbjct: 136 DCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQVGVPSLVCFLNKVDV 195
Query: 689 ADE-EMVELVEMEIRELMTEMGYDG 760
D+ E++ELVEME+REL++ + G
Sbjct: 196 VDDPELLELVEMELRELLSFYKFPG 220
Score = 112 bits (269), Expect = 3e-25
Identities = 52/91 (57%), Positives = 62/91 (68%)
Frame = +3
Query: 234 IDSIKYNLKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYA 413
+ S + + F R KPH NVGTIGHVDHGKTTLTAAITKVL++ A+ +
Sbjct: 44 LSSSTFGTSSFWRSMATFTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFD 103
Query: 414 DIDNAPEEKARGITINVAHVEYQTEQRHYGH 506
+ID APEEK RGITI AHVEY+T +RHY H
Sbjct: 104 EIDKAPEEKKRGITIATAHVEYETAKRHYAH 134
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L++ +T G QTREH LLA +G++ ++
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC 150
Query: 668 FINKVDAA----DEEMVELVEMEIRELMTEMGYD 757
NK+DA + + + E+ + ++GY+
Sbjct: 151 CCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYN 184
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 425
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L++ +T G QTREH LLA +G++ ++
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC 150
Query: 668 FINKVDAA----DEEMVELVEMEIRELMTEMGYD 757
NK+DA + + + E+ + ++GY+
Sbjct: 151 CCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYN 184
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 425
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L++ +T G QTREH LLA +G++ ++
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC 150
Query: 668 FINKVDAA----DEEMVELVEMEIRELMTEMGYD 757
NK+DA + + + E+ + ++GY+
Sbjct: 151 CCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYN 184
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 425
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH D+IKNMITGT+Q D A+L++ +T G QTREH LLA +G++ ++
Sbjct: 91 DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC 150
Query: 668 FINKVDAA----DEEMVELVEMEIRELMTEMGYD 757
NK+DA + + + E+ + ++GY+
Sbjct: 151 CCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYN 184
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Frame = +3
Query: 291 RTKPHCNVGTIGHVDHGKTTLTAAI---------------TKVLSDLNLAQKKGYADIDN 425
+ K H N+ IGHVD GK+T T + K +++N K +D
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 426 APEEKARGITINVAHVEYQT 485
E+ RGITI++A +++T
Sbjct: 63 LKAERERGITIDIALWKFET 82
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVVFINKVD 685
DCPGH + M+ G A +DGA+L++AA + PQT EHL + ++H+++ NK+D
Sbjct: 133 DCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNKID 192
Query: 686 AADEEMVELVEMEIRELMT 742
+E+ I++ +T
Sbjct: 193 LINEKAATEQHEAIQKFIT 211
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 416
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 41 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLGYAN 83
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVVFINKVD 685
DCPGH + M+ G A +DGA+L++AA + PQT EHL + ++H+++ NK+D
Sbjct: 133 DCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNKID 192
Query: 686 AADEEMVELVEMEIRELMT 742
+E+ I++ +T
Sbjct: 193 LINEKAATEQHEAIQKFIT 211
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 416
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 41 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLGYAN 83
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMP-------QTREHLLLAKQIGIQHVVV 667
D PGH Y+ NMI+G +Q D +LV++A G QTREH+ LAK +G+ ++V
Sbjct: 185 DAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIV 244
Query: 668 FINKVDAA----DEEMVELVEMEIRELMTEMGYD 757
+NK+D +E + +E ++ + GY+
Sbjct: 245 VVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYN 278
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Frame = +3
Query: 297 KPHCNVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYAD---------------IDNAP 431
K H NV IGHVD GK+T+ I + ++ Q + Y +D
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 432 EEKARGITINVAHVEYQTEQRHY 500
EE+ +G T+ V ++TE +
Sbjct: 159 EERLKGKTVEVGRAHFETESTRF 181
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVVFINKVD 685
DCPGH + M+ G A MDGA+L++AA + PQT EHL + + ++H+++ NK+D
Sbjct: 127 DCPGHDILMATMLNGAAIMDGALLLIAANETCPQPQTSEHLAAVEIMQLKHIIILQNKID 186
Query: 686 AADEEM 703
E +
Sbjct: 187 LIQENV 192
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 7/43 (16%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLS-------DLNLAQKKGYAD 416
N+GTIGHV HGK+T+ AI+ V + + N+ K GYA+
Sbjct: 35 NIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYAN 77
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGV-MPQTREHLLLAKQIGIQHVVVFINKVD 685
DCPGH + M+ G A MDGA+L++AA + PQT EHL + ++ +++ NK+D
Sbjct: 125 DCPGHDILMATMLNGAAIMDGALLIIAANETCPQPQTAEHLASVDMMHLKDIIIIQNKID 184
Query: 686 AADEEMVELVEMEIRELMTEMGYDG 760
E +I+ +T +G
Sbjct: 185 LIQENEAIKQHEDIQRFITNTNAEG 209
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 7/43 (16%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAIT-----KVLSDL--NLAQKKGYAD 416
N+GTIGHV HGK+T+ A++ K S+L N+ K GYA+
Sbjct: 35 NIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYAN 77
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAAT--------DGVMPQTREHLLLAKQIGIQHVV 664
D PGH D++ NMI G Q D AILV+ A+ D + QTREH + + G++ V+
Sbjct: 323 DSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVI 382
Query: 665 VFINKVDAA--DEEMVELVEMEI 727
V INK+D +E +L++ +
Sbjct: 383 VAINKMDIVGYSKERFDLIKQHV 405
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 18/115 (15%)
Frame = +3
Query: 210 TKHNSPVRIDSIKYNLKRHYAEKQIFERTKP---HCNVGTIGHVDHGKTTLTAAITKVLS 380
T+++S ++I K K E + ++ N+ +GHVD GK+TL+ + +L
Sbjct: 205 TENSSDIKIRGPKSQSKHKPEEWMLLDKESDALSQLNLAIVGHVDSGKSTLSGRLLHLLG 264
Query: 381 DLNLAQKKGYAD---------------IDNAPEEKARGITINVAHVEYQTEQRHY 500
++ Q Y +D + EE+ RGIT+ VA V Y +RH+
Sbjct: 265 RISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVA-VAYFNSKRHH 318
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +2
Query: 476 IPNRTEALWTHDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQ 655
+P+ ++ D PGHA + + G A D +LVVAA DGVMPQT E + A+ +
Sbjct: 263 MPDSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVP 322
Query: 656 HVVVFINKVD 685
VVV INK D
Sbjct: 323 -VVVAINKCD 331
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 312 VGTIGHVDHGKTTLTAAI 365
V +GHVDHGKT+L A+
Sbjct: 222 VTVMGHVDHGKTSLLDAL 239
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/59 (42%), Positives = 33/59 (55%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH + G D AI+VVAA DG+ PQT E + AK + +V+ INK+D
Sbjct: 558 DTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVP-IVIAINKID 615
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 258 KRHYAEKQIFERTKPHCNVGTI-GHVDHGKTTLTAAITK 371
KR +++ ++ + V TI GHVDHGKTTL I K
Sbjct: 485 KRQTFDEEDLDKLEDRPPVITIMGHVDHGKTTLLDYIRK 523
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH+D+ + +DG +LVV + +G MPQTR L A + G VVV +NK+D
Sbjct: 152 DTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFG-HAVVVVVNKID 209
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 273 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 443
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 74 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 129
Query: 444 RGITI 458
RGITI
Sbjct: 130 RGITI 134
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH+D+ + +DG +LVV + +G MPQTR L A + G VVV +NK+D
Sbjct: 151 DTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFG-HAVVVVVNKID 208
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +3
Query: 273 EKQIFERTKPHCNVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKA 443
+KQ+ R N+ + HVDHGKTTL ++ KV D + Q++ +D+ E+
Sbjct: 73 KKQLDRRDNVR-NIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQER---IMDSNDLERE 128
Query: 444 RGITI 458
RGITI
Sbjct: 129 RGITI 133
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH D+ + A +GA+LVV A+ GV QT ++ LA + ++ ++ +NK+D
Sbjct: 158 DTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLE-IIPVLNKIDL 216
Query: 689 ADEEMVELVEMEIRELM 739
E E V EI E++
Sbjct: 217 PGAE-PEKVLREIEEVI 232
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDL-NLAQKKGYADIDNAPEEKARGITINV 464
N I H+DHGK+TL + +V + N K+ + +DN E+ RGITI +
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQF--LDNMDLERERGITIKL 138
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD- 685
D PGH D+ + + GA+LVV A GV QT + LA + + +V INK+D
Sbjct: 141 DTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQTVANFYLAFEANLT-IVPVINKIDQ 199
Query: 686 -AADEEMVELVEMEIRELMTE 745
AD E V+ + +L TE
Sbjct: 200 PTADPERVKAQLKSMFDLDTE 220
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPE-EKARGITI 458
N I H+DHGK+TL + ++ + KKG+ + ++ RGIT+
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTI----KKGHGQPQYLDKLQRERGITV 114
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH ++ M DGA+L+V A +GVM T + A Q + +VV INKVD
Sbjct: 215 DTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLP-IVVVINKVDR 273
Query: 689 ADEEM 703
E+
Sbjct: 274 LITEL 278
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 458
NV +GH+ HGKT + T +S N +K D +E+ R I+I
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISI 192
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH ++ M DGA+L+V A +GVM T + A Q + +VV INKVD
Sbjct: 215 DTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLP-IVVVINKVDR 273
Query: 689 ADEEM 703
E+
Sbjct: 274 LITEL 278
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 458
NV +GH+ HGKT + T +S N +K D +E+ R I+I
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISI 192
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH + G++ D AILVV T G+ PQT E L L + + ++ +NKVD
Sbjct: 115 DTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQTIESLNLLRMRNTEFIIA-LNKVD 172
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PG+ ++ M DGA+ +V A GVM T + A Q + +VV INKVD
Sbjct: 201 DTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAIQDHLP-IVVVINKVDR 259
Query: 689 ADEEM 703
E+
Sbjct: 260 LITEL 264
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAI---TKVLSDLNLAQKKGYADIDNAPEEKARGITI 458
NV +GH+ HGKT + T +S N K D +E+ R I+I
Sbjct: 126 NVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISI 178
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH + G++ D AILVV G+ PQT E L L + + +V +NKVD
Sbjct: 774 DTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIVA-LNKVD 831
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH + G++ D AILVV G+ PQT E L L + + ++ +NKVD
Sbjct: 707 DTPGHESFTNLRSRGSSLCDLAILVVDIKHGLEPQTIESLNLLRMRNTEFIIA-LNKVD 764
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH + G+ D AILVV G+ PQT E L L ++ ++ ++ +NKVD
Sbjct: 562 DTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIA-LNKVD 619
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVDA 688
D PGH D+ + +DGAI + + GV PQ+ A + G+ + F+NK+D
Sbjct: 167 DTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPR-ICFVNKMDR 225
Query: 689 ADEEMVELVEMEIREL 736
+M + L
Sbjct: 226 LGANFFRTRDMIVTNL 241
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 297 KPHCNVGTIGHVDHGKTTLTAAITKVLS-DLNLAQ-KKGYADIDNAPEEKARGITINVA 467
K + N+G + H+D GKTT T I + + + +G A +D +E+ RGITI A
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSA 152
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVV--VFINKV 682
D PGH D+ + T DGA+++V A +GV QT H +L +Q I+ + + +NK+
Sbjct: 80 DSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQT--HAVL-RQAWIEKLTPCLVLNKI 136
Query: 683 D 685
D
Sbjct: 137 D 137
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV--VVFINKV 682
D PGH D+ + +DGAILV+ + GV Q+ + + +Q+ V V FINK+
Sbjct: 139 DTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQS---ITVDRQMRRYEVPRVAFINKL 195
Query: 683 D 685
D
Sbjct: 196 D 196
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVA 467
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSA 124
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHV--VVFINKV 682
D PGH D+ + +DGAILV+ + GV Q+ + + +Q+ V V FINK+
Sbjct: 139 DTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQS---ITVDRQMRRYEVPRVAFINKL 195
Query: 683 D 685
D
Sbjct: 196 D 196
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLN-LAQKKGY----ADIDNAPEEKARGITINVA 467
N+G H+D GKTTLT + ++ + + +G A +D+ E+ +GITI A
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSA 124
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 563 MDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD--AADEEMVELVEMEIREL 736
++GAILVV A +G + QT+ L A + G++ +++ +NKVD + EE + VE + +L
Sbjct: 2 VEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILL-LNKVDRPSVTEERCDEVESLVFDL 60
Query: 737 MTEMG 751
G
Sbjct: 61 FANCG 65
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PGH D+ + DGA++VV +GV QT L A I+ V+ +NK+D
Sbjct: 104 DSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLT-VNKMD 161
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 309 NVGTIGHVDHGKTTLTAAITKVLSDLNLAQKKGYADIDNAPEEKARGITI 458
N+ I HVDHGK+TLT ++ + D +E RGITI
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITI 70
>At2g27700.1 68415.m03356 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|P39730 Translation initiation factor IF-2
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00009: Elongation factor Tu GTP binding domain,
PF03144: Elongation factor Tu domain 2
Length = 479
Score = 35.1 bits (77), Expect = 0.051
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 509 DCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHVVVFINKVD 685
D PG+ Y G D AILVV G+ PQT E L L + + ++ +NKVD
Sbjct: 104 DTPGYEFYTNLRSRGLGLCDFAILVVDIMHGLEPQTIECLNLLRMKNTEFIIA-LNKVD 161
>At4g31370.1 68417.m04448 fasciclin-like arabinogalactan family
protein similar to fasciclin-like
arabinogalactan-protein 1 [Arabidopsis thaliana]
gi|13377776|gb|AAK20857
Length = 278
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 342 KTTLTAAITKVLSDLNLA-QKKGYADIDNAPEEKARGITINVAHVEYQTEQRHYGHTTAQ 518
KT L AAI K + LA + I N E + R I + ++Y E + G
Sbjct: 46 KTKLIAAIDKYQTITVLAVSNDAISSITNRSEVELRNILMTHVILDYYDELKLQGMREKS 105
Query: 519 VMLTTL 536
+MLTTL
Sbjct: 106 IMLTTL 111
>At3g02210.1 68416.m00202 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL3 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623);
supported by cDNA: gi|26452134|dbj|AK118555.1; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 452
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 195 PVCKCTKHNSPVRID-SIKYNLKRHYAEK 278
P+ +CTKH PVRI +K N K+++ K
Sbjct: 284 PLVQCTKHMCPVRIHWHVKVNYKQYWRVK 312
>At1g62860.1 68414.m07098 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 534
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 257 EIILNGVNPDRTVVFRTFAHWLCFRTNFTAGLTKL 153
E++ +GV PD T+ FR+ LC + GLT L
Sbjct: 486 EMVSSGVCPD-TITFRSMLAGLCTKAELQKGLTML 519
>At1g09790.1 68414.m01098 phytochelatin synthetase-related contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 454
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 186 EAKPVCKCTKHNSPVRID-SIKYNLKRHYAEK 278
E PV KC+ H P+RI +K N + ++ K
Sbjct: 278 EVSPVVKCSDHMCPIRIHWHVKVNYREYWRVK 309
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,971,111
Number of Sequences: 28952
Number of extensions: 323379
Number of successful extensions: 896
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -