Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00778
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           30   0.081
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.57 
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   1.7  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   1.7  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.3  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           25   3.0  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   9.2  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 29.9 bits (64), Expect = 0.081
 Identities = 17/62 (27%), Positives = 23/62 (37%)
 Frame = +1

Query: 508 PPSTYARYGTTSTANAWYGSAPSTYARYGTASTANARDGSTPSTYARHNPYATCNARCTP 687
           PP+T     TT+ A      AP+T       +T     G T +T     P  T  +  T 
Sbjct: 24  PPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTT 83

Query: 688 PP 693
            P
Sbjct: 84  TP 85



 Score = 26.2 bits (55), Expect = 0.99
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 505 VPPSTYARYGTTSTANAWYGSAPSTYARYGTASTANARDGSTPST 639
           V P+T      T+T     G   +T    G  +T  + D +TPS+
Sbjct: 43  VAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSS 87


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 314  HWELWWSHILHRWRRW 267
            HW L   H+ H W RW
Sbjct: 1629 HWRLIQKHMQHIWNRW 1644


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +1

Query: 283 CKIWDHHNSQCLVLVRPLHICQV*EHLRRQCLVWVRPLHLCQIWDH 420
           C++W   +      ++PL +C+   HL++   V + P H  +   H
Sbjct: 89  CRLWRWPDLNSHTELKPLDVCEYAYHLKKD-EVCINPYHYARNESH 133


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +1

Query: 499 VWVPPSTYARYGTTSTANAWYGSAPSTYARYGTASTANARDGSTPSTYARHNPYATCNAR 678
           +W  P+T++   TT+T   W     S   R  T +T      ST +T   H P  T    
Sbjct: 158 IWTDPTTWSAPTTTTT---W-----SDQPRPPTTTTTTVWTDSTATT-TTHAPTTTTTWS 208

Query: 679 CTPPP 693
             PPP
Sbjct: 209 DLPPP 213


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 42  TCTRNQVRSSSSFTTSYAREATAPTSHAR-NICRHCIRCKQK*SKPTYIFNIC 197
           TC R  V     +T  Y  +   PT   R N  +HC++C+Q  + P    N C
Sbjct: 655 TC-RCTVTEDGRYTGRYCEKC--PTCAGRCNEFKHCVQCQQYKTGPLAEANEC 704


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +1

Query: 508 PPSTYARYGTTSTANAWYGSAPSTYARYGTASTANARDGSTPST 639
           PP+T     TT+ A      AP+T       +T     G T +T
Sbjct: 24  PPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTT 67


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +1

Query: 499 VWVPPSTYARYGTTSTANAWYGSAPSTYARYGTASTANARDGSTPSTYARHNPYATCNAR 678
           +W  P+T++   TT+T   W    P       T +T      ST +T    +   T  + 
Sbjct: 158 IWTDPTTWSAPTTTTT---WSDQPPPP-----TTTTTTVWTDSTATTTTPASTTTTTWSD 209

Query: 679 CTPPP 693
             PPP
Sbjct: 210 LPPPP 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,812
Number of Sequences: 2352
Number of extensions: 13868
Number of successful extensions: 57
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)