Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00776
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.8  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   6.4  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   6.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   8.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 422 QHVFCNSTQNTLLDKM 469
           QH F N   ++LLDKM
Sbjct: 611 QHEFKNGDSSSLLDKM 626


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 498 CLGLFQYFVTILSSKVFCVELQNTCC 421
           C+G    ++ +  SK++ +E    CC
Sbjct: 65  CIGRCASYIQVSGSKIWQMERSCMCC 90


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 546 LHKKTTYTEIMLFSYQ*IIIKFSLEL 623
           LH+K TY  +    Y    IK SL L
Sbjct: 50  LHRKPTYNNLQEMKYLERAIKESLRL 75


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 681 LFRPSDFNNLQQEKCKSTK 625
           LFR    +NL + +C STK
Sbjct: 75  LFREPQLHNLCRSECFSTK 93


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 419 RQHVFCNSTQNTLLDKMV 472
           R+  +C +T+N   DKM+
Sbjct: 306 REFFYCAATKNPNFDKMI 323


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +2

Query: 425 HVFCNSTQNTLLDKMVTKYWKRPKHYVETLMLHITPVKNFTSQENNLY 568
           HV  ++   T+    V   WK  +   + L   +  V N+T Q++ ++
Sbjct: 444 HVSTSAYVATVWINSVINRWKFIEFIRKVLEFDVKCVSNYTKQQSKIH 491


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,455
Number of Sequences: 336
Number of extensions: 4278
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)