Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00776
         (783 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    25   2.6  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    24   4.6  
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    23   8.1  

>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 16/74 (21%), Positives = 36/74 (48%)
 Frame = +2

Query: 260 RSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFCN 439
           RS I  ++K     + + + ++F   H     RT++    K ++ S  + R ++Q+    
Sbjct: 66  RSKILKTIKGNPNLSDRDLARKFGATH-STVRRTRLREGIKSYRASKQSNRTIKQNSLIK 124

Query: 440 STQNTLLDKMVTKY 481
           +    L D+++TK+
Sbjct: 125 TRARKLYDQVLTKF 138


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 398 SANKRRLRQHVFCNSTQ 448
           S N+R L +HV+C  T+
Sbjct: 180 SVNERNLLEHVYCTETR 196


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP10 protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 767 LNIHHHQTLDIHC 729
           L IH H T+ +HC
Sbjct: 31  LTIHSHMTVSLHC 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,954
Number of Sequences: 2352
Number of extensions: 17657
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)