Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00774
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.2  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   8.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.2  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 369 PVVIVYQRLTVYELRQCFFLRIV 437
           PV + Y  + V ++  CFF+R++
Sbjct: 175 PVYVSYLLIFVQQIPFCFFVRVI 197


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 133 KITRKQRTEDERLNKT 180
           K  +++ TEDE LNKT
Sbjct: 267 KTIKEKYTEDEELNKT 282


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 97  KPIRSRGKPPRIKI 138
           K IR+RG PP+ ++
Sbjct: 8   KKIRNRGTPPKFEL 21


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -1

Query: 72  WLRRRRGCPSPVSCPNRRCCRT 7
           WL    G P P + P   C  T
Sbjct: 37  WLAAASGAPHPAALPIEGCNET 58


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -1

Query: 72  WLRRRRGCPSPVSCPNRRCCRT 7
           WL    G P P + P   C  T
Sbjct: 37  WLAAASGAPHPAALPIEGCNET 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,541
Number of Sequences: 336
Number of extensions: 3015
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)