Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00774
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    26   1.1  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    25   3.4  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    24   4.5  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 51  CPSPVSCPNRRCCRTW 4
           CP  ++ P+RRC R W
Sbjct: 420 CPVRINIPSRRCYRCW 435


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 51  CPSPVSCPNRRCCRTW 4
           CP  +  P RRC + W
Sbjct: 407 CPVKIQIPKRRCFKCW 422


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 515 CLAVICNAH*GCDICVR 565
           CL+ IC A  GCD  +R
Sbjct: 41  CLSCICEASSGCDASLR 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,243
Number of Sequences: 2352
Number of extensions: 11677
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)