Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00773
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-23|CAB70113.2|  152|Caenorhabditis elegans Hypothetical...    31   1.1  
AL132949-6|CAB70102.1|  152|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    31   1.1  
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    31   1.1  
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U12965-3|AAZ32811.1|  980|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AL132949-23|CAB70113.2|  152|Caenorhabditis elegans Hypothetical
           protein Y53F4B.26 protein.
          Length = 152

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 556 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 678
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AL132949-6|CAB70102.1|  152|Caenorhabditis elegans Hypothetical
           protein Y53F4B.7 protein.
          Length = 152

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 556 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 678
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 556 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 678
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 556 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 678
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 556 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 678
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical
           protein C34C6.5b protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +1

Query: 553 VMSTRQRSRTLNKDSPIWKTRTKIGDSQRRTKATTMMDWTVKDRSHSI 696
           V S  +++     D    KT   + DS+  T  T   +WT+ D   ++
Sbjct: 250 VFSVYEKTTQQRIDDSKVKTNGSVSDSEEETMETKFQNWTLPDSDETL 297


>Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical
           protein C34C6.5a protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +1

Query: 553 VMSTRQRSRTLNKDSPIWKTRTKIGDSQRRTKATTMMDWTVKDRSHSI 696
           V S  +++     D    KT   + DS+  T  T   +WT+ D   ++
Sbjct: 300 VFSVYEKTTQQRIDDSKVKTNGSVSDSEEETMETKFQNWTLPDSDETL 347


>U12965-3|AAZ32811.1|  980|Caenorhabditis elegans Hypothetical
           protein F23F12.8 protein.
          Length = 980

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 316 PKQTP*RRWQLNYGYDYQPPRHYTERRDYYQNQQDLIPQIFRLLDE 453
           P +T    W+ N   D+Q P H +  R Y    +   PQI+  +D+
Sbjct: 766 PSETSFVEWKGNRVIDHQLPTHISPPRVYPPVPETHQPQIYSTIDQ 811


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,008,424
Number of Sequences: 27780
Number of extensions: 270836
Number of successful extensions: 771
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)