Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00772
(564 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 168 9e-41
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 155 7e-37
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 146 2e-34
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 138 8e-32
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 133 2e-30
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 129 4e-29
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 5e-22
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 100 2e-20
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 91 1e-17
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 80 4e-14
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 79 9e-14
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 76 7e-13
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 76 7e-13
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 71 2e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 71 2e-11
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 71 2e-11
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 70 3e-11
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 68 2e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 67 2e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 66 5e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 7e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 66 7e-10
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 65 9e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 64 2e-09
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 64 3e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 62 9e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 62 9e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 61 2e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 58 1e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 58 1e-07
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 58 1e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 3e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 56 8e-07
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 54 2e-06
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 53 4e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 5e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 1e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 3e-05
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 7e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 7e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 9e-05
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 6e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 8e-04
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.004
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.006
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.017
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.017
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 40 0.040
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.21
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.21
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.28
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.28
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.37
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.37
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.65
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.65
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 36 0.86
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.86
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.5
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.5
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.0
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 34 2.6
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 34 2.6
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 4.6
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.6
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 33 6.1
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 32 8.1
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 168 bits (408), Expect = 9e-41
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+IDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIR
Sbjct: 93 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIR 152
Query: 434 GAIILAKLSVLPVRRGYWGNKIGKP 508
GAIILAKLS++PVRRGYWGNKIGKP
Sbjct: 153 GAIILAKLSIVPVRRGYWGNKIGKP 177
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE E
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 92
Score = 40.7 bits (91), Expect = 0.023
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K +TVPCKVTG+CGSV VRLI
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLI 196
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 155 bits (376), Expect = 7e-37
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+IDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD NGH+GL VKCSKEVATAIR
Sbjct: 33 IIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIR 92
Query: 434 GAIILAKLSVLPVRRGYWGNKIGKP 508
GAIILAKLS++PV RGYWGNKIGKP
Sbjct: 93 GAIILAKLSIVPVCRGYWGNKIGKP 117
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3
Query: 159 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+PVTKLG L+ + KI LE IYLFSLPIKE E
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESE 32
Score = 36.3 bits (80), Expect = 0.49
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K +TVPCKVTG+C SV V LI
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLI 136
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 146 bits (355), Expect = 2e-34
Identities = 65/104 (62%), Positives = 84/104 (80%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L + +++D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 377 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G P
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDP 150
Score = 64.9 bits (151), Expect = 1e-09
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQ 66
Score = 34.7 bits (76), Expect = 1.5
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVAVRLI 564
+TVP KV+GKCGSV VRL+
Sbjct: 151 HTVPVKVSGKCGSVTVRLV 169
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 138 bits (334), Expect = 8e-32
Identities = 65/74 (87%), Positives = 69/74 (93%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 467 PVRRGYWGNKIGKP 508
P+R+GYWGNKIGKP
Sbjct: 108 PLRQGYWGNKIGKP 121
Score = 38.3 bits (85), Expect = 0.12
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K NTVPCKVTG CGSV V LI
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLI 140
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 133 bits (322), Expect = 2e-30
Identities = 60/99 (60%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Frame = +2
Query: 215 EHLLVF-FTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 391
EH+ +F + ++++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 392 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+G+P
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEP 167
Score = 57.2 bits (132), Expect = 2e-07
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3
Query: 141 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQ 82
Score = 32.7 bits (71), Expect = 6.1
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 508 NTVPCKVTGKCGSVAVRLI 564
+T+P KV GKCGSV VRLI
Sbjct: 168 HTIPTKVHGKCGSVHVRLI 186
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 129 bits (312), Expect = 4e-29
Identities = 58/89 (65%), Positives = 72/89 (80%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ ++ID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 422 TAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
AIR II+AKLSV+P+RRGYWG +G+P
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWGTNLGQP 151
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +3
Query: 144 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQ 67
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (253), Expect = 5e-22
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
++D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIR
Sbjct: 54 IVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIR 113
Query: 434 GAIILAKLSVLPVRRGYWGNKIGKP 508
GAI AK ++ PVR G W GKP
Sbjct: 114 GAIARAKCAIRPVRLGLWDGAQGKP 138
Score = 40.3 bits (90), Expect = 0.030
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++++ EW+P T +GRLV+ KI LE I+ FS I+E E
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPE 53
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 100 bits (240), Expect = 2e-20
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +2
Query: 338 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KP
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKP 117
Score = 38.3 bits (85), Expect = 0.12
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 487 G*QDRKANTVPCKVTGKCGSVAVRLI 564
G + RK +TVP KVTG+CGSV VRLI
Sbjct: 111 GNEIRKPHTVPGKVTGRCGSVLVRLI 136
Score = 33.5 bits (73), Expect = 3.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 144 DQKEWVPVTKLGRLVREGKI 203
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 91.5 bits (217), Expect = 1e-17
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 394
+IDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 68 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 62.5 bits (145), Expect = 7e-09
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE E
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 67
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 79.8 bits (188), Expect = 4e-14
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 391
+IDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 21 IIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 32.3 bits (70), Expect = 8.1
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 198 KIDKLESIYLFSLPIKEFE 254
KI LE IYLFSLPIKE E
Sbjct: 2 KIKSLEEIYLFSLPIKESE 20
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 78.6 bits (185), Expect = 9e-14
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = -3
Query: 502 SDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTC 323
+DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT
Sbjct: 27 TDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTG 86
Query: 322 LFLYRHDL*NLIIQGRAEEEIND 254
L L HDL + ++Q A+EEI+D
Sbjct: 87 LLLDGHDLQHFVLQRAAQEEIDD 109
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 75.8 bits (178), Expect = 7e-13
Identities = 45/91 (49%), Positives = 56/91 (61%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+ID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA I+
Sbjct: 81 IIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVANTIQ 131
Query: 434 GAIILAKLSVLPVRRGYWGNKIGKPTPSLAR 526
IIL KL ++PV RGY G+K KP L +
Sbjct: 132 RVIILTKLPIVPVWRGYCGSKTSKPHTVLCK 162
Score = 36.3 bits (80), Expect = 0.49
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 162 PVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
P +KLG LV++ +I L IYLFSLPIKE E
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETE 80
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 75.8 bits (178), Expect = 7e-13
Identities = 35/94 (37%), Positives = 60/94 (63%)
Frame = +2
Query: 227 VFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 406
+FF N ++ ++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNKL--VNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 407 SKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
S + I+ A+ AKL++ +RRGYW + GKP
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKP 183
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = +2
Query: 251 RVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 430
+++D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV AI
Sbjct: 96 QIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAI 154
Query: 431 R 433
+
Sbjct: 155 Q 155
Score = 56.8 bits (131), Expect = 3e-07
Identities = 23/36 (63%), Positives = 32/36 (88%)
Frame = +3
Query: 147 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQ 96
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/80 (40%), Positives = 54/80 (67%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ + ++D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 422 TAIRGAIILAKLSVLPVRRG 481
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 70.5 bits (165), Expect = 2e-11
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = +2
Query: 260 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 440 IILAKLSVLPVRRGYWGNKIGKP 508
IIL + S+ G+ GNKI KP
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKP 77
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
++D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR
Sbjct: 49 IVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIR 107
Query: 434 GAIILAKLSVLPVR--RGYWGNKIGKP 508
AI AKLS++ VR G W G P
Sbjct: 108 KAIAHAKLSLIKVRVGCGSWECGCGSP 134
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = -3
Query: 505 LSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGT 326
L+ + TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ +
Sbjct: 107 LTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSS 166
Query: 325 CLFLYRHDL*NLIIQ 281
L L R D+ N I+Q
Sbjct: 167 GLLLDRLDVHNFILQ 181
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 67.3 bits (157), Expect = 2e-10
Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ + DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 422 TAIRGAIILAKL-SVLPVRRGYWGNKIGKPTPSLARSPASV 541
TA+ + + L S LP R Y GN I KPT R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 66.1 bits (154), Expect = 5e-10
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
++D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++ AI+
Sbjct: 46 IVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQ 104
Query: 434 GAIILAKLSVLPVRR--GYWGNKIGKP 508
AI AK++++PVRR G W G+P
Sbjct: 105 KAIRDAKMNIIPVRRGCGSWQCTCGEP 131
Score = 37.5 bits (83), Expect = 0.21
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 150 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+EW P T +G LV+EGKI ++ ++ +LPI E E
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPE 45
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 7e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 314 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 65.7 bits (153), Expect = 7e-10
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +2
Query: 251 RVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 430
+++D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A AI
Sbjct: 37 QIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAI 95
Query: 431 RGAIILAKLSVLPVRR--GYWGNKIGKP 508
+ AI AKL+++ ++R G W GKP
Sbjct: 96 KKAIDNAKLNIIEIKRGCGSWECGCGKP 123
Score = 36.7 bits (81), Expect = 0.37
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 150 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+EW P T+LGRLV G+I + LP+KE++
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQ 37
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 65.3 bits (152), Expect = 9e-10
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 352
+IDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 93 IIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 62.5 bits (145), Expect = 7e-09
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE E
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESE 92
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 463
N EVL I + T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL++
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNI 121
Query: 464 LPVRRG 481
+ ++RG
Sbjct: 122 IEIKRG 127
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 153 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
EW P TKLG +V+EG+I + I+ IKE E
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPE 48
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/74 (44%), Positives = 46/74 (62%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ V DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 422 TAIRGAIILAKLSV 463
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 62.1 bits (144), Expect = 9e-09
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 454
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 455 LSVLPVRRG 481
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 62.1 bits (144), Expect = 9e-09
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
++D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V AI+
Sbjct: 91 IVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQ 149
Query: 434 GAIILAKLSVLPVRR--GYWGNKIGKPTPSLAR 526
AI +AKL+++ V R G W ++ G T SL R
Sbjct: 150 KAIDVAKLNIIEVDRGSGSWEDQPG-GTNSLTR 181
Score = 33.1 bits (72), Expect = 4.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
W P T+LGR V+ G I +E LP+KE E
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAE 90
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 61.3 bits (142), Expect = 2e-08
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 269 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 448
L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V AI+ AI +
Sbjct: 44 LVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDI 103
Query: 449 AKLSVLPVRR--GYWGNKIGKP 508
AKL+++ V R G W G+P
Sbjct: 104 AKLNIIDVSRGCGSWECGCGRP 125
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
W P T+LG+ V EG+ID ++ LP+KE E
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESE 39
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 245
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 454
P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 455 LSVLPVRRG 481
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 58.0 bits (134), Expect = 1e-07
Identities = 38/85 (44%), Positives = 46/85 (54%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
+I+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA +
Sbjct: 52 IIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQ 105
Query: 434 GAIILAKLSVLPVRRGYWGNKIGKP 508
AI L + + GY GNKIG P
Sbjct: 106 RAITLLSF-LFSTQTGYKGNKIGNP 129
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2
Query: 254 VIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 352
+IDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 93 IIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 55.6 bits (128), Expect = 8e-07
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
K + KEW+P TKLG LV++ KI LE IYLFSLPIK E
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSE 92
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 272 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 451
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 452 KLSVL--PVRRGY 484
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 55.6 bits (128), Expect = 8e-07
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = +2
Query: 239 NQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 418
N++ +I FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 419 ATAI 430
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 54.0 bits (124), Expect = 2e-06
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +2
Query: 308 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 487
P+ KQT Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATG 147
Query: 488 GNKI 499
G ++
Sbjct: 148 GKRL 151
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +3
Query: 147 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFESLISSSARP 281
+ +W+P+TKLG LV+E KI LE IY FSL + SL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
Score = 32.3 bits (70), Expect = 8.1
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 514 VPCKVTGKCGSVAVRLI 564
VPC+VTG+CGS+ V LI
Sbjct: 156 VPCRVTGRCGSLLVHLI 172
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 53.2 bits (122), Expect = 4e-06
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +2
Query: 242 QRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 421
+ V DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 422 TAIRGAIIL 448
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 461 VLPV 472
++ V
Sbjct: 72 LISV 75
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 458 SVLPVRR 478
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +2
Query: 260 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 440 IILAKLSVLPV 472
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYW 487
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V R G W
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 488 GNKIGKP 508
G P
Sbjct: 132 ECACGAP 138
Score = 38.3 bits (85), Expect = 0.12
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 150 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
+EW P TKLGRLV+EGKI ++ I I+E E
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPE 39
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 275 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 454
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 455 LSVLPV 472
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 49.2 bits (112), Expect = 7e-05
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +3
Query: 156 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
W PVTKLGRLV++GK+ ++ I+ F + IKEFE
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFE 67
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 7e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 461 VLPVR 475
+ V+
Sbjct: 138 MYKVK 142
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 467 PV 472
+
Sbjct: 71 KI 72
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 467 PV 472
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 266 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 445
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 446 LAKLSVLPV 472
AK +++ V
Sbjct: 98 EAKKNLIRV 106
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 467 --PVRRG 481
PV G
Sbjct: 79 TVPVENG 85
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 467 PV 472
V
Sbjct: 209 QV 210
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +2
Query: 251 RVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 394
+++D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 66 QIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 42.3 bits (95), Expect = 0.008
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3
Query: 162 PVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
PVTKLGRLV++GK+ ++ I+ F + IKE++
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQ 66
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 8e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 467 PV 472
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 272 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 451
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 452 KLSVL--PVRRG 481
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 272 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 451
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 452 KLSVLPVRR 478
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 460
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 461 VLPVRRG 481
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 463
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 464 LPV 472
+ +
Sbjct: 91 VKI 93
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 467 PV 472
V
Sbjct: 128 RV 129
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 461 VLPV 472
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 467 PV 472
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.017
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 467 PV 472
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.017
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 454
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 39.9 bits (89), Expect = 0.040
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -3
Query: 250 NSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSF 149
NSL GKE K + S + I P+ T PSLVTGTH F
Sbjct: 18 NSLTGKECKKISSMVVILPALTNLPSLVTGTHPF 51
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.21
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 311 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 478
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.21
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.21
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 461 VLPVRR 478
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.28
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 442 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 344
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.28
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.37
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 281 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 460
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 461 VLPV 472
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.37
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 287 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 466
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 467 PV 472
V
Sbjct: 151 RV 152
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.65
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 284 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 433
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.65
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 293 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 472
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 35.5 bits (78), Expect = 0.86
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L ++ + I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 377 NGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPTPSL 520
GH GL CS EVATAI+ I + L S P+ R GN GK PS+
Sbjct: 98 -GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 0.86
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 311 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 478
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 458 SVLPVRR 478
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.5
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 269 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 448
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 449 AKLSVL 466
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 430
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.0
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 278 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 457
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 458 SVLPVRR 478
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.9 bits (74), Expect = 2.6
Identities = 14/41 (34%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Frame = -3
Query: 352 LETCALSGTCLFLYRHDL*NLI----IQGRAEEEINDSNSL 242
LE+CAL TC+ +Y HD+ ++ + +A+E+++D++ L
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSDAHGL 1005
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 33.9 bits (74), Expect = 2.6
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Frame = -1
Query: 192 RVQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRXRRENRHVH 31
R+ R +EPT S CR+ GR H R G HR+ IR R H
Sbjct: 137 RLSGQRCLSREPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQH 196
Query: 30 RLEQRPPL 7
RL + PP+
Sbjct: 197 RLSREPPV 204
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 4.6
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 350 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 502
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 4.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 293 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 439
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.7 bits (71), Expect = 6.1
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 221 LLVFFTNQRIRVIDFFLGPSLN---DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 391
LL+F N + ++ F+ N ++++I + K + G+ RFK + IG N IG
Sbjct: 110 LLIF--NYNLFLLFFYKTNKYNKILQKIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIG 167
Query: 392 LGVKCSKEVATAIRGAIILA 451
+GV + AI A A
Sbjct: 168 IGVSKDFYLQEAINKARFFA 187
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 469 SSKRLLG*QDRKANTVPCKVTGKCGSVAVRLI 564
S ++ LG + K + V CKVTG CGSV V LI
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLI 32
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,899,970
Number of Sequences: 1657284
Number of extensions: 10907770
Number of successful extensions: 31393
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 29606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31231
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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