Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00772
(564 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 173 2e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 173 2e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 173 2e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 173 2e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 173 2e-43
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 29 4.3
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 4.3
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 4.3
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 29 4.3
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 4.3
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 4.3
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 173 bits (420), Expect = 2e-43
Identities = 84/104 (80%), Positives = 88/104 (84%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L + +IDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 377 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKP
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKP 160
Score = 74.9 bits (176), Expect = 7e-14
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFE 75
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K +TVPCKVTGKCGSV+VRLI
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLI 179
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 173 bits (420), Expect = 2e-43
Identities = 84/104 (80%), Positives = 88/104 (84%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L + +IDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 377 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKP
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKP 160
Score = 74.9 bits (176), Expect = 7e-14
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFE 75
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K +TVPCKVTGKCGSV+VRLI
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLI 179
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 173 bits (420), Expect = 2e-43
Identities = 84/104 (80%), Positives = 88/104 (84%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L + +IDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 377 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKP
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKP 160
Score = 74.9 bits (176), Expect = 7e-14
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFE 75
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K +TVPCKVTGKCGSV+VRLI
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLI 179
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 173 bits (420), Expect = 2e-43
Identities = 84/104 (80%), Positives = 88/104 (84%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L + +IDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 377 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKP
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKP 160
Score = 74.9 bits (176), Expect = 7e-14
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFE 75
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K +TVPCKVTGKCGSV+VRLI
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLI 179
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 173 bits (420), Expect = 2e-43
Identities = 84/104 (80%), Positives = 88/104 (84%)
Frame = +2
Query: 197 KNRQTREHLLVFFTNQRIRVIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 376
K + E L + +IDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 377 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKP 508
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKP
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKP 160
Score = 74.9 bits (176), Expect = 7e-14
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +3
Query: 138 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFE 254
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFE 75
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 502 KANTVPCKVTGKCGSVAVRLI 564
K +TVPCKVTGKCGSV+VRLI
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLI 179
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 144 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRXRREN-RHVHRLEQRPPLLN 1
L C H D R+H ++GL + V+ REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESQHRP 518
RKSP + L+L+SC+ Q ++ T SE++ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESQHRP 518
RKSP + L+L+SC+ Q ++ T SE++ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 144 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRXRREN-RHVHRLEQRPPLLN 1
L C H D R+H ++GL + V+ REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESQHRP 518
RKSP + L+L+SC+ Q ++ T SE++ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 411 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESQHRP 518
RKSP + L+L+SC+ Q ++ T SE++ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEPP 1071
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,786,143
Number of Sequences: 53049
Number of extensions: 538812
Number of successful extensions: 2710
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2213
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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