Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00771
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 137 9e-33
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 137 1e-32
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 137 1e-32
04_01_0042 + 473912-474058,474208-474349,474442-476264 136 1e-32
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 98 6e-21
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 98 6e-21
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 97 1e-20
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 88 9e-18
06_03_0788 - 24603849-24603949,24604030-24604123,24604206-246044... 32 0.63
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 31 1.1
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 30 2.5
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.4
04_03_0703 - 18870287-18871351,18871542-18871733 28 7.8
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 137 bits (332), Expect = 9e-33
Identities = 65/87 (74%), Positives = 77/87 (88%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 436
TD SKLD+ EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK FMEAL A
Sbjct: 53 TDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAA 112
Query: 437 GADISMIGQFGVGFYSSYLVADRVLFT 517
GAD+SMIGQFGVGFYS+YLVA+RV+ T
Sbjct: 113 GADVSMIGQFGVGFYSAYLVAERVVVT 139
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +3
Query: 108 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 254
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ES
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFES 51
Score = 87.8 bits (208), Expect = 9e-18
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 687
V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 138 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIK 197
Query: 688 XXSQFIGYQSS*WLKRTRKRTV 753
S+FI Y S W ++T ++ +
Sbjct: 198 KHSEFISYPISLWTEKTTEKEI 219
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 137 bits (331), Expect = 1e-32
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 436
TD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL A
Sbjct: 53 TDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAA 112
Query: 437 GADISMIGQFGVGFYSSYLVADRVLFT 517
GAD+SMIGQFGVGFYS+YLVA+RV+ T
Sbjct: 113 GADVSMIGQFGVGFYSAYLVAERVVVT 139
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +3
Query: 108 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 254
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ES
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFES 51
Score = 87.8 bits (208), Expect = 9e-18
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 687
V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 138 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVK 197
Query: 688 XXSQFIGYQSS*WLKRTRKRTV 753
S+FI Y S W ++T ++ +
Sbjct: 198 KHSEFISYPISLWTEKTTEKEI 219
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 137 bits (331), Expect = 1e-32
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 436
TD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEAL A
Sbjct: 53 TDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAA 112
Query: 437 GADISMIGQFGVGFYSSYLVADRVLFT 517
GAD+SMIGQFGVGFYS+YLVA+RV+ T
Sbjct: 113 GADVSMIGQFGVGFYSAYLVAERVVVT 139
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +3
Query: 108 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 254
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ES
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFES 51
Score = 87.8 bits (208), Expect = 9e-18
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 687
V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 138 VTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVK 197
Query: 688 XXSQFIGYQSS*WLKRTRKRTV 753
S+FI Y S W ++T ++ +
Sbjct: 198 KHSEFISYPISLWTEKTTEKEI 219
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 136 bits (330), Expect = 1e-32
Identities = 63/87 (72%), Positives = 78/87 (89%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 436
TD SKLD+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FMEALQA
Sbjct: 60 TDKSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQA 119
Query: 437 GADISMIGQFGVGFYSSYLVADRVLFT 517
GAD+SMIGQFGVGFYS+YLVA++V+ T
Sbjct: 120 GADVSMIGQFGVGFYSAYLVAEKVVVT 146
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = +3
Query: 96 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 254
+ Q AE ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+ES
Sbjct: 6 DVQMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFES 58
Score = 81.8 bits (193), Expect = 6e-16
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 687
V +KHNDDEQYVWES AGGSFTV D +GE LGRGTKI L +K+D E++
Sbjct: 145 VTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTKITLFLKDDQLEYLEERRLKDLVK 204
Query: 688 XXSQFIGYQSS*WLKRTRKRTV 753
S+FI Y W ++T ++ +
Sbjct: 205 KHSEFISYPIYLWSEKTTEKEI 226
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 98.3 bits (234), Expect = 6e-21
Identities = 51/89 (57%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ- 433
TD S L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT F++AL+
Sbjct: 389 TDSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALKE 448
Query: 434 ---AGADISMIGQFGVGFYSSYLVADRVL 511
GAD +IGQFGVGFYS++LVA++V+
Sbjct: 449 NKDLGADNGLIGQFGVGFYSAFLVAEKVV 477
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/53 (56%), Positives = 44/53 (83%)
Frame = +3
Query: 90 EMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 248
E + AE E F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDALDK+R+
Sbjct: 333 EKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRF 385
Score = 37.1 bits (82), Expect = 0.017
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 DEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVK-EDLAEFMXXXXXXXXXXXXSQ 699
D+QYVWE A S V + +P L RGT+I L ++ +D EF SQ
Sbjct: 486 DKQYVWEGVADSSSYVIKEETDPEKMLTRGTQITLVLRPDDKFEFADPGRIQGLVKNYSQ 545
Query: 700 FIGYQSS*WLKRTR 741
F+ + W +++R
Sbjct: 546 FVSFPIYTWQEKSR 559
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 98.3 bits (234), Expect = 6e-21
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 TDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL 430
TD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +
Sbjct: 152 TDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM 211
Query: 431 QAGADISMIGQFGVGFYSSYLVADRV 508
Q G D+++IGQFGVGFYS YLVAD V
Sbjct: 212 QTGGDLNLIGQFGVGFYSVYLVADYV 237
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +3
Query: 96 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 248
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+
Sbjct: 98 KTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRF 148
Score = 68.1 bits (159), Expect = 8e-12
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +1
Query: 511 VHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 687
V SKHNDD+Q+VWES A GSF + D+ EPLGRGT+I LH++++ E++
Sbjct: 239 VISKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEEDKLKDLVK 298
Query: 688 XXSQFIGYQSS*W 726
S+FI + W
Sbjct: 299 KYSEFINFPIYLW 311
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 97.5 bits (232), Expect = 1e-20
Identities = 48/88 (54%), Positives = 65/88 (73%), Gaps = 4/88 (4%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEAL-- 430
TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT F++AL
Sbjct: 400 TDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFLKALKE 459
Query: 431 --QAGADISMIGQFGVGFYSSYLVADRV 508
+AG D ++IGQFGVGFYS++LV+D+V
Sbjct: 460 SQEAGVDSNLIGQFGVGFYSAFLVSDKV 487
Score = 68.5 bits (160), Expect = 6e-12
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = +3
Query: 87 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 254
+ +T P VE +QAE+ +LM LI+++ YSNKE+FLREL+SN+SDALDK+RY S
Sbjct: 345 DSSDTPP--VEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKLRYLS 398
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +1
Query: 508 AVHSKH-NDDEQYVWESSA-GGSFTVRP--DSGEPLGRGTKIVLHVKEDLAEFMXXXXXX 675
AV +K D+QYVWE A S+T+R D + L RGT++ L++K + F
Sbjct: 488 AVSTKSPKSDKQYVWEGEAESSSYTIREETDPEKLLPRGTRLTLYLKREDKGFAHPEKIQ 547
Query: 676 XXXXXXSQFIGYQSS*WLKR 735
SQF+ + W ++
Sbjct: 548 KLVKNYSQFVSFPIYTWQEK 567
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 87.8 bits (208), Expect = 9e-18
Identities = 51/98 (52%), Positives = 66/98 (67%), Gaps = 13/98 (13%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNLGTIAKSGT 409
TD S L G EL I+I P+ GT+TI DTGIGMTK +L + LGTIA+SGT
Sbjct: 130 TDSSVLSDGGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLGTIAQSGT 189
Query: 410 KAFMEALQ----AGADISMIGQFGVGFYSSYLVADRVL 511
F++AL+ GAD +IGQFGVGFYS++LVA++V+
Sbjct: 190 SKFLKALKENKDLGADNGLIGQFGVGFYSAFLVAEKVV 227
Score = 66.1 bits (154), Expect = 3e-11
Identities = 28/51 (54%), Positives = 43/51 (84%)
Frame = +3
Query: 102 QPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 254
+ A E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+R+ S
Sbjct: 78 EEAAGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLS 128
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 532 DEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVK-EDLAEFMXXXXXXXXXXXXSQ 699
D+QYVWE+ A S V + +P L RGT+I L ++ +D EF SQ
Sbjct: 236 DKQYVWEAMADSSSYVIKEETDPEKMLTRGTQITLFLRDDDKYEFADPGRIQGLVKNYSQ 295
Query: 700 FIGYQSS*WLKRTR 741
F+ + W +++R
Sbjct: 296 FVSFPIYTWQEKSR 309
>06_03_0788 -
24603849-24603949,24604030-24604123,24604206-24604413,
24604727-24604839,24605679-24605816,24605916-24605999,
24606517-24606675,24606754-24606837,24607505-24607840,
24607941-24608042,24608970-24609153,24609699-24610044,
24610444-24610591,24611053-24611203,24611786-24611867,
24612314-24612362
Length = 792
Score = 31.9 bits (69), Expect = 0.63
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 260 DPSKLD-SGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 436
D S+L+ S K L+ K +K L++ID G GMT A+++ + K K +
Sbjct: 256 DASRLNISVKSLFSKKA-DKKIPVLSVIDDGHGMTCAEMMRMISFGHKRPDKQRQD---- 310
Query: 437 GADISMIGQFGVGFYSSYLVADRVLFTLNTMTTSNTCGNLLQEARSQSAQTAVSPLVEVQ 616
IG+FG+GF + + R L T T+S+ L ++ +++ P+V +
Sbjct: 311 -----QIGRFGIGFKTGAMKLGRDAIVL-TQTSSSRSVAFLSQSFNENKDNLEIPVVTYR 364
Query: 617 R 619
+
Sbjct: 365 K 365
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 31.1 bits (67), Expect = 1.1
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 11/122 (9%)
Frame = +2
Query: 338 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVGFYSSYLVA- 499
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG + L A
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAA 159
Query: 500 -DRVLFTLNTMTTSNTC----GNLLQEARSQSAQTAVSPLVEVQRSSFTSKRTWQNSWKN 664
+ +N T + G L + +++ A + L V + T T Q W+
Sbjct: 160 TEAGCLVVNAPTANTVAAAEHGIALLASMARNVSQADAALKAVYSRTLT-VFTAQGKWQR 218
Query: 665 TK 670
TK
Sbjct: 219 TK 220
>08_01_0344 +
3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 174 FYSNKEIFLRELISNSSDALDKIRYESSRIRQNSIVAKSCTSRSFPTR 317
FY + I +EL+S +S+A IR +S + ++ I+ K+ S P R
Sbjct: 841 FYGDSAIAHQELVSLASEAASNIRTVASFVYEDEIIKKAELSLQEPMR 888
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 286 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 453
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>04_03_0703 - 18870287-18871351,18871542-18871733
Length = 418
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 605 PRGSPLSGRTVNEPPAEDSHTYCSSSLCLE*TARGQRPSNWS 480
P G P R PP+ S T S + C +A G R S WS
Sbjct: 232 PTGDPPPARAAAGPPSTGSSTSMSRARCCG-SACGTRRSTWS 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,527,099
Number of Sequences: 37544
Number of extensions: 496650
Number of successful extensions: 1253
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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