Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00771
(818 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 156 2e-38
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 87 1e-17
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 87 1e-17
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 87 1e-17
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.3
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.3
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.7
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 2.3
Z81051-2|CAB02863.2| 222|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 9.2
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 156 bits (378), Expect = 2e-38
Identities = 74/87 (85%), Positives = 83/87 (95%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 436
T+PS+LD+GKEL+IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKAFMEALQA
Sbjct: 53 TEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 112
Query: 437 GADISMIGQFGVGFYSSYLVADRVLFT 517
GADISMIGQFGVGFYS++LVAD+V+ T
Sbjct: 113 GADISMIGQFGVGFYSAFLVADKVVVT 139
Score = 88.6 bits (210), Expect = 5e-18
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +3
Query: 117 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 254
ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKIRY++
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQA 51
Score = 79.0 bits (186), Expect = 4e-15
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +1
Query: 511 VHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXXX 690
V SK+NDD+ Y WESSAGGSF VRP + + RGTKIV+H+KED +F+
Sbjct: 138 VTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERKIKEIVKK 197
Query: 691 XSQFIGYQSS*WLKRTRKRTV 753
SQFIGY +++ R++ V
Sbjct: 198 HSQFIGYPIKLVVEKEREKEV 218
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 93.5 bits (222), Expect = 2e-19
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 5/120 (4%)
Frame = +2
Query: 257 TDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 436
TDP +L +E+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT F+ L
Sbjct: 109 TDPEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMD 168
Query: 437 GADIS-----MIGQFGVGFYSSYLVADRVLFTLNTMTTSNTCGNLLQEARSQSAQTAVSP 601
A S +IGQFGVGFY+++LVADRV+ T T +N + E+ S S + P
Sbjct: 169 TATSSDQQQDLIGQFGVGFYAAFLVADRVVVT----TKNNDDDQYIWESDSASFTISKDP 224
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +3
Query: 108 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIR 245
++ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKIR
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIR 104
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 511 VHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXXXXXXXXX 687
V +K+NDD+QY+WES + SFT+ D G L RGT+I L++KE+ A+F+
Sbjct: 199 VTTKNNDDDQYIWESDS-ASFTISKDPRGNTLKRGTQITLYLKEEAADFLEPDTLKNLVH 257
Query: 688 XXSQFIGYQSS*WLKRT 738
SQFI + W +T
Sbjct: 258 KYSQFINFDIFLWQSKT 274
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/85 (51%), Positives = 62/85 (72%)
Frame = +2
Query: 296 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 475
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 476 FYSSYLVADRVLFTLNTMTTSNTCG 550
FYS+++VAD V+ T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 81 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 248
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRY 86
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/85 (51%), Positives = 62/85 (72%)
Frame = +2
Query: 296 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 475
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 476 FYSSYLVADRVLFTLNTMTTSNTCG 550
FYS+++VAD V+ T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 81 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 248
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRY 86
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/85 (51%), Positives = 62/85 (72%)
Frame = +2
Query: 296 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 475
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 476 FYSSYLVADRVLFTLNTMTTSNTCG 550
FYS+++VAD V+ T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 81 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRY 248
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K RY
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEKRRY 86
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 295 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 456
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +1
Query: 295 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 456
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.7
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +1
Query: 316 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 456
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.7
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 283 QRAVHQDHSQQERGHSYDH 339
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 310 QQERGHSYDHRYRYWYDQGRFGEQFGN 390
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>Z81051-2|CAB02863.2| 222|Caenorhabditis elegans Hypothetical
protein C55A6.3 protein.
Length = 222
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +2
Query: 371 LVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSSYLVADRVLFTLNTMTTSNTCG 550
LVNN G+ K TKA E +A ++ QF V +S +++ ++L L T +S G
Sbjct: 85 LVNNAGSAVKYSTKA--EPSRA----KLVEQFDVNTFSVVILSQKLL-PLLTKASSKVSG 137
Query: 551 NLLQEARS 574
+ L +R+
Sbjct: 138 DELSVSRA 145
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 427 SLHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKSALVL 314
SLH + R R+ + V +GLG + DDRK+ V+
Sbjct: 155 SLHFKYEQRLREELRNVEYVGLGCYSWNKDDRKNEQVV 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,024,512
Number of Sequences: 27780
Number of extensions: 406864
Number of successful extensions: 1185
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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