Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00770
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical... 77 1e-14
AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical... 77 1e-14
AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical... 77 1e-14
AF036704-3|AAB88559.2| 503|Caenorhabditis elegans Hypothetical ... 68 6e-12
Z82084-7|CAB04979.2| 499|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 3.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 3.4
AF038609-5|AAK29796.2| 168|Caenorhabditis elegans Hypothetical ... 29 3.4
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 3.4
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ... 28 5.9
Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical pr... 28 7.9
U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical pr... 28 7.9
U39743-4|AAA80438.4| 581|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical
protein K07H8.2c protein.
Length = 429
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +1
Query: 4 LTSGWTPVISALFISGIGGIVLDQAVDYFRGYEVFQPIVNGIGGNLVCVQSSRLATHLHQ 183
L +GWTPVI ++ IS GG +L+ AV + + P++NG+GGNL VQ+SRL+T+ H+
Sbjct: 230 LYNGWTPVIMSMLISSAGGFILETAVRRYHSLSTYGPVLNGVGGNLAAVQASRLSTYFHK 289
Query: 184 TAIPGILP 207
G+LP
Sbjct: 290 AGTVGVLP 297
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 264 AKVARMLLILAVFGQIIFMVVADF---VYQGTVTIQFA-FGITYLTCAXXXXXXXXXXAY 431
++ AR+LL+L V G I F + + VT F Y+ A
Sbjct: 319 SRSARVLLLLVVPGHICFNFLIQLFTLTSKNNVTPHGPLFTSLYMIAAIIQVVILLFVCQ 378
Query: 432 IVIHFMWKRKKDPDNAAIPYLTALG 506
+++ +WK K DPDN+ IPYLTALG
Sbjct: 379 LLVALLWKWKIDPDNSVIPYLTALG 403
>AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical
protein K07H8.2b protein.
Length = 503
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +1
Query: 4 LTSGWTPVISALFISGIGGIVLDQAVDYFRGYEVFQPIVNGIGGNLVCVQSSRLATHLHQ 183
L +GWTPVI ++ IS GG +L+ AV + + P++NG+GGNL VQ+SRL+T+ H+
Sbjct: 304 LYNGWTPVIMSMLISSAGGFILETAVRRYHSLSTYGPVLNGVGGNLAAVQASRLSTYFHK 363
Query: 184 TAIPGILP 207
G+LP
Sbjct: 364 AGTVGVLP 371
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 264 AKVARMLLILAVFGQIIFMVVADF---VYQGTVTIQFA-FGITYLTCAXXXXXXXXXXAY 431
++ AR+LL+L V G I F + + VT F Y+ A
Sbjct: 393 SRSARVLLLLVVPGHICFNFLIQLFTLTSKNNVTPHGPLFTSLYMIAAIIQVVILLFVCQ 452
Query: 432 IVIHFMWKRKKDPDNAAIPYLTALG 506
+++ +WK K DPDN+ IPYLTALG
Sbjct: 453 LLVALLWKWKIDPDNSVIPYLTALG 477
>AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical
protein K07H8.2a protein.
Length = 507
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +1
Query: 4 LTSGWTPVISALFISGIGGIVLDQAVDYFRGYEVFQPIVNGIGGNLVCVQSSRLATHLHQ 183
L +GWTPVI ++ IS GG +L+ AV + + P++NG+GGNL VQ+SRL+T+ H+
Sbjct: 308 LYNGWTPVIMSMLISSAGGFILETAVRRYHSLSTYGPVLNGVGGNLAAVQASRLSTYFHK 367
Query: 184 TAIPGILP 207
G+LP
Sbjct: 368 AGTVGVLP 375
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 264 AKVARMLLILAVFGQIIFMVVADF---VYQGTVTIQFA-FGITYLTCAXXXXXXXXXXAY 431
++ AR+LL+L V G I F + + VT F Y+ A
Sbjct: 397 SRSARVLLLLVVPGHICFNFLIQLFTLTSKNNVTPHGPLFTSLYMIAAIIQVVILLFVCQ 456
Query: 432 IVIHFMWKRKKDPDNAAIPYLTALG 506
+++ +WK K DPDN+ IPYLTALG
Sbjct: 457 LLVALLWKWKIDPDNSVIPYLTALG 481
>AF036704-3|AAB88559.2| 503|Caenorhabditis elegans Hypothetical
protein ZK185.2 protein.
Length = 503
Score = 68.1 bits (159), Expect = 6e-12
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +1
Query: 1 VLTSGWTPVISALFISGIGGIVLDQAVDYFRGYEVFQPIVNGIGGNLVCVQSSRLATHLH 180
VL +GW P++ A+ I+ G+VL +++ + FQP++NG+GGNLV VQ+SR++T LH
Sbjct: 300 VLKNGWWPILCAMMITTFSGLVLKKSMQTYPPLAAFQPLINGLGGNLVAVQASRISTQLH 359
Query: 181 Q 183
+
Sbjct: 360 R 360
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +3
Query: 264 AKVARMLLILAVFGQIIFMVVADFVYQGTVTIQFAFGITYLTCAXXXXXXXXXXAYIVIH 443
A A++LL ++V IIF+ + F++ F I+++ I++
Sbjct: 389 ASAAQILLGISVPSNIIFIFII-FLFGVGFHNTTPFTISFVLVCAIQVTTLLYICQILVR 447
Query: 444 FMWKRKKDPDNAAIPYLTALG 506
MW + DPDN+AIP+LTALG
Sbjct: 448 AMWIMRIDPDNSAIPFLTALG 468
>Z82084-7|CAB04979.2| 499|Caenorhabditis elegans Hypothetical
protein ZK1053.6 protein.
Length = 499
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 255 TTAAKVARMLLILAVFGQIIFMVVA---DFVYQGTVTIQFAFGITYLTCAXXXXXXXXXX 425
++ ++ AR+LL A+ Q+ F+ ++ FV V F F I Y
Sbjct: 393 SSESRTARLLLFTALPFQMFFVGLSTAMSFVIDEPVETDFRFFIAYALVVLIQQSTILYL 452
Query: 426 AYIVIHFMWKRKKDPDNAAIPYLTA 500
A +++ W DPDN AIP LT+
Sbjct: 453 AQLIVFAFWSFGIDPDNHAIPLLTS 477
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 34 ALFISGIGGIVLDQAVDYFRGYEVFQPIVNGIGGNLVCVQSSRLATHL--HQTA 189
A +S G++ + + Y +Q +++G+ GN V +SR+++HL H+T+
Sbjct: 322 AAMVSCGAGLLQSKGAMTYPNYPAYQTLISGLAGNRGAVLASRISSHLEVHKTS 375
>Z81553-6|CAB04495.1| 388|Caenorhabditis elegans Hypothetical
protein F56H6.6 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = -3
Query: 392 AREVRD-AERELDGDRPLVHEVR--DHHEDYLPEDGQDQQHASHLRRGRPKNKVFQGHSM 222
AR+V+ A R +DG + V VR + +ED +P + L+ G KVF+ H
Sbjct: 201 ARKVKPIANRIIDGKQRQVLVVRRFETNEDEIPLE------VEQLKMGFENQKVFEFHHN 254
Query: 221 ILVFSGRIPGMAVWWRCVASRDDCTHTRFP 132
+IP + W+ + ++ T P
Sbjct: 255 FFFIGHKIPDVEKWFHASKTENEVTAWEIP 284
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = -3
Query: 485 DGGIVGVLLPLPHEVDHDVGQVKEQHHLQQGAREVRDAERELDGDRPLVHEVRDHHE-DY 309
D V+ P+ VD D G V GA + + A LDG PLV D E D+
Sbjct: 1924 DQSPTAVVTPVAIAVDADKGYVFWLDR-GGGAADAKVARAGLDGSNPLVIASNDLAELDH 1982
Query: 308 LPEDGQDQQ-HASHLRRGRPKNKVFQGHSMILVFS--GRIP-GMAVW 180
+ D + + + S + GR + + G V S GR P G+A +
Sbjct: 1983 IAIDTTNTRVYFSEAKAGRISSVTYDGQDRHYVLSDGGRQPNGLAFY 2029
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = -3
Query: 485 DGGIVGVLLPLPHEVDHDVGQVKEQHHLQQGAREVRDAERELDGDRPLVHEVRDHHE-DY 309
D V+ P+ VD D G V GA + + A LDG PLV D E D+
Sbjct: 1924 DQSPTAVVTPVAIAVDADKGYVFWLDR-GGGAADAKVARAGLDGSNPLVIASNDLAELDH 1982
Query: 308 LPEDGQDQQ-HASHLRRGRPKNKVFQGHSMILVFS--GRIP-GMAVW 180
+ D + + + S + GR + + G V S GR P G+A +
Sbjct: 1983 IAIDTTNTRVYFSEAKAGRISSVTYDGQDRHYVLSDGGRQPNGLAFY 2029
>AF038609-5|AAK29796.2| 168|Caenorhabditis elegans Hypothetical
protein C54E4.4 protein.
Length = 168
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 440 PLHVEEEEGPRQCRHPLPHGARRLLGSVFLGLAFVILSLFGLEYGN 577
PL + E+G R+ +P+GA +L + + V+++LF + N
Sbjct: 2 PLDYQSEDGTTSSRNGIPNGALTVLIIAAIAIVCVVITLFCMLVNN 47
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 404 LQQGAREVRDAERELDGDRPLVHEVRDHHEDYLPEDGQD 288
+QQ R+V D E + DGD+ HE + D ED +D
Sbjct: 2451 MQQVQRDVEDDEEDEDGDQN-EHEAEEDDHDREDEDDED 2488
>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
protein Y108G3AL.7 protein.
Length = 1192
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = -3
Query: 401 QQGAREVRDAERELDGDRP---LVHEVRDHHEDYLPEDGQDQQHA 276
++GA+++R+A E G R L+H D +++ EDG++++ A
Sbjct: 169 KRGAQKIRNAISEASGSRGGAVLLHNDDDENDEEDQEDGENEEDA 213
>Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical
protein B0272.2 protein.
Length = 213
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/109 (22%), Positives = 49/109 (44%)
Frame = -3
Query: 455 LPHEVDHDVGQVKEQHHLQQGAREVRDAERELDGDRPLVHEVRDHHEDYLPEDGQDQQHA 276
L +V HD+G+++ + +Q A+ V + GD + E ++Y+ + ++ A
Sbjct: 11 LLQKVQHDLGRLEGTQN-EQDAQVVVQC---IYGDVITLKENCQTLDNYVSREPPARRQA 66
Query: 275 SHLRRGRPKNKVFQGHSMILVFSGRIPGMAVWWRCVASRDDCTHTRFPP 129
+ +R + + V H + + S M WR RD+ TR+ P
Sbjct: 67 ARMRVDQLRADV---HRVDMAVSAVHTRMTQRWRAATERDELLRTRYRP 112
>U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical
protein ZC487.1a protein.
Length = 411
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -3
Query: 482 GGIVGVLLPLPHEVDHDVGQVKEQHHLQQGAREVRDAERELDGDRPLVHEVRDHHE 315
GG V+ PL H H VG ++ ++ + R R++ + + V D HE
Sbjct: 116 GGFPAVVRPLRHHCAHSVGFIRNENEFKNWFRFQRNSSVHRNEHYVVQEYVDDGHE 171
>U39743-4|AAA80438.4| 581|Caenorhabditis elegans Hypothetical
protein R173.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 85 YFRGYEVFQPIVNGIGGNLVCVQSSRLATHLHQTAI 192
+F YE F PI++G+GG ++ +L H +T I
Sbjct: 298 HFDDYEEFVPIIDGVGG-ILPEPPEQLTLHRRKTPI 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,249,924
Number of Sequences: 27780
Number of extensions: 284124
Number of successful extensions: 915
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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