Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00767
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   2.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.7  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 112 LCFQNNSVSHNCRVLF*FVL 171
           L F  +S S+NC VLF F++
Sbjct: 228 LLFSVSSSSYNCEVLFSFLI 247


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 56  KKNISYFSSDMYVPEPRPP 112
           K++ISY S +   P P PP
Sbjct: 718 KESISYLSMENNAPPPPPP 736


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 628 NQLHATCWS*TQLQSATERH*RWWCGVEE-WLRRTGSGTRSY 750
           N  +++ WS   + S T    R WC   +  L  T S T  Y
Sbjct: 212 NSANSSIWSPASIDSFTLEQHRSWCSSSQPVLSTTNSTTNCY 253


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = -3

Query: 394 KEISVVMSPTSLH-REWHVSTSSVGEFVKCDANNLPPKPATANRRANRIVVEAAIVTIPS 218
           +++  V  P  +  R++  S  S         N  PP P  +NR       +AA   I S
Sbjct: 99  EQLRAVWDPDDVFIRKFETSFESGKPSGVISTNTSPPSPILSNRFGENEEADAASNVISS 158

Query: 217 LP 212
            P
Sbjct: 159 TP 160


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/24 (33%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +1

Query: 340 TRATLCVDLWDSSQ-RLFPLSTKE 408
           T  ++C+++W SS+  L P S+++
Sbjct: 222 TYTSICIEIWQSSESSLRPRSSQK 245


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 128  TVCHIIAEFYFNSCC 172
            T+ HI+A    N CC
Sbjct: 1352 TIAHILASTELNLCC 1366


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 128  TVCHIIAEFYFNSCC 172
            T+ HI+A    N CC
Sbjct: 1352 TIAHILASTELNLCC 1366


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 128  TVCHIIAEFYFNSCC 172
            T+ HI+A    N CC
Sbjct: 1352 TIAHILASTELNLCC 1366


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 128  TVCHIIAEFYFNSCC 172
            T+ HI+A    N CC
Sbjct: 1352 TIAHILASTELNLCC 1366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,983
Number of Sequences: 336
Number of extensions: 3894
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)