Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00766
(510 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IVB5 Cluster: LIX1-like protein; n=31; Eumetazoa|Rep:... 179 4e-44
UniRef50_Q8N485 Cluster: Protein limb expression 1 homolog; n=23... 148 6e-35
UniRef50_Q4RUT4 Cluster: Chromosome 12 SCAF14993, whole genome s... 116 4e-25
UniRef50_A4SB03 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.93
UniRef50_Q8L5A2 Cluster: HV80H14.14B; n=1; Hordeum vulgare|Rep: ... 35 1.2
UniRef50_Q2GXR0 Cluster: Putative uncharacterized protein; n=5; ... 34 2.2
UniRef50_Q2R358 Cluster: Expressed protein; n=3; Oryza sativa|Re... 33 5.0
UniRef50_Q3JLQ6 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q1VFI5 Cluster: Putative uncharacterized protein; n=1; ... 32 6.6
UniRef50_Q8H740 Cluster: RING-H2 protein; n=1; Medicago sativa|R... 32 6.6
UniRef50_Q095U2 Cluster: Histidinol dehydrogenase; n=2; Cystobac... 32 8.7
UniRef50_Q0U786 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q8TN26 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
>UniRef50_Q8IVB5 Cluster: LIX1-like protein; n=31; Eumetazoa|Rep:
LIX1-like protein - Homo sapiens (Human)
Length = 337
Score = 179 bits (435), Expect = 4e-44
Identities = 92/154 (59%), Positives = 111/154 (72%), Gaps = 4/154 (2%)
Frame = +1
Query: 1 ALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTKAEARR 180
ALQEFWQ+K LV+YE VP+ PPYVCYVTLPGG+CFGSFQ CPTKAEARR
Sbjct: 103 ALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTKAEARR 162
Query: 181 RTT----LNSINEQRIQRARISADIRPFHEKAVAEARASFAGDTSNPHQDPSAGIAAFRF 348
+NS+ + R RI+ + F EK+V+EA ASF G+ +P+ GI AFRF
Sbjct: 163 SAAKIALMNSVFNEHPSR-RITDE---FIEKSVSEALASFNGNREEA-DNPNTGIGAFRF 217
Query: 349 MLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRD 450
MLE+NKG++MLEFQELMTVFQLLHWNGSL+AMR+
Sbjct: 218 MLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRE 251
Score = 39.9 bits (89), Expect = 0.033
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 450 RQCSRQEVVAHYSARALDD 506
RQCSRQEV+AHYS RALDD
Sbjct: 252 RQCSRQEVLAHYSHRALDD 270
>UniRef50_Q8N485 Cluster: Protein limb expression 1 homolog; n=23;
Coelomata|Rep: Protein limb expression 1 homolog - Homo
sapiens (Human)
Length = 282
Score = 148 bits (359), Expect = 6e-35
Identities = 72/149 (48%), Positives = 97/149 (65%)
Frame = +1
Query: 4 LQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTKAEARRR 183
LQEFW+ K +V+YES+PA PP+V YVTLPGG+CFG+FQ C ++AEARR
Sbjct: 34 LQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQCCLSRAEARRD 93
Query: 184 TTLNSINEQRIQRARISADIRPFHEKAVAEARASFAGDTSNPHQDPSAGIAAFRFMLEAN 363
++ + F ++V EA AS +G T + DPS + A+ +MLE+N
Sbjct: 94 AAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSVGAYHYMLESN 152
Query: 364 KGRTMLEFQELMTVFQLLHWNGSLRAMRD 450
G+TMLEFQELMT+FQLLHWNGSL+A+R+
Sbjct: 153 MGKTMLEFQELMTIFQLLHWNGSLKALRE 181
>UniRef50_Q4RUT4 Cluster: Chromosome 12 SCAF14993, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF14993, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 666
Score = 116 bits (278), Expect = 4e-25
Identities = 54/130 (41%), Positives = 80/130 (61%)
Frame = +1
Query: 61 LVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTKAEARRRTTLNSINEQRIQRARISAD 240
L++YES P PPYVCYVTLPGG+CFG+++ C +AEARR ++ +
Sbjct: 40 LILYESAPTPGPPYVCYVTLPGGSCFGNYKVCLFQAEARRDAARVALMNSLVNELPCRCI 99
Query: 241 IRPFHEKAVAEARASFAGDTSNPHQDPSAGIAAFRFMLEANKGRTMLEFQELMTVFQLLH 420
F +++ +A A+ + +D + + +L + GRTMLEFQE+MTVFQLLH
Sbjct: 100 NAQFISQSLQQA-ATHCAVSMEDARDSGTSLGTYSLLLHSYIGRTMLEFQEMMTVFQLLH 158
Query: 421 WNGSLRAMRD 450
WNG+L+A+R+
Sbjct: 159 WNGTLKALRE 168
>UniRef50_A4SB03 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus
lucimarinus CCE9901
Length = 3060
Score = 35.1 bits (77), Expect = 0.93
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = -2
Query: 416 SSWNTVISSWNSSIVR---PLFASSMNLNAAIPALGS-WCGLLVSPAKDARASATAFS 255
+S+N ISSWN+++V +F S++ N IP GS W LV+ + ATAF+
Sbjct: 1360 TSFNQNISSWNTALVTDMGAMFQSAVAFNQPIPKSGSQWDTSLVTNMNNMFGGATAFN 1417
>UniRef50_Q8L5A2 Cluster: HV80H14.14B; n=1; Hordeum vulgare|Rep:
HV80H14.14B - Hordeum vulgare (Barley)
Length = 254
Score = 34.7 bits (76), Expect = 1.2
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +1
Query: 79 VPAAHPPYVCYVTLPGGACFGSFQNCPTKAEARRRTTLNSINEQRIQRARISADIRPFHE 258
+P +H P C++ L G S Q CP + AR TTL + R P
Sbjct: 52 LPCSHFP-PCFILLDGAHAATSLQPCPAHSSARAATTLQPRTAAPLPSLRCRCRNAPMES 110
Query: 259 KAVAEARASFAGDTSNPHQDPSAGIAAFRFMLEANKGRTMLEFQEL 396
A S+A DPS A+ L + + +LE ++L
Sbjct: 111 CADMPLTPSYA-------HDPSFAAASATLFLTLEERKVILEEKKL 149
>UniRef50_Q2GXR0 Cluster: Putative uncharacterized protein; n=5;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1202
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 420 VEQLEYR-HQLLEFQHRPTFVRFQHEPKRSDTSAGVLVWV 304
+EQL+YR H++ HRP RF+ + KR D + W+
Sbjct: 1109 IEQLDYRRHEVRVSDHRPVSGRFRFQVKRIDPKRRAVAWM 1148
>UniRef50_Q2R358 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 280
Score = 32.7 bits (71), Expect = 5.0
Identities = 39/137 (28%), Positives = 59/137 (43%)
Frame = -1
Query: 486 SSALRLPAASIAVAHRSQRPVPVEQLEYRHQLLEFQHRPTFVRFQHEPKRSDTSAGVLVW 307
SS L L +AS A A + Q+ P E L L+ + F+ + +A
Sbjct: 125 SSLLLLLSASSASAAKKQQQRPFELLRTASGTLQIKFSDDFLLAADDKVADLAAAATNPP 184
Query: 306 VARVSGEGRACLRHRLLVKWSDIRRDSCSLNTLFINAI*CGSASCFRFSWAVLKTAKARS 127
V R G+ + + LV +S RR S L+T I + +A + A T + S
Sbjct: 185 VLR--GDKKLEKEYEELVGYSKARRWSPKLDT--IQEVVAAAAGDTATAAATATTTRRSS 240
Query: 126 TGERDVADVGRMGSRHR 76
G R + +GR+GSR R
Sbjct: 241 KG-RGLPFLGRLGSRRR 256
>UniRef50_Q3JLQ6 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 668
Score = 32.3 bits (70), Expect = 6.6
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 166 AEARRRTTLNSINEQRIQRARISADIRPFHEKAVAEARASF 288
A ARRR + + EQR R D+RP E VA A +F
Sbjct: 556 ARARRRAEMLDLMEQRPDDLRFGIDLRPVQEHRVAIAAMAF 596
>UniRef50_Q1VFI5 Cluster: Putative uncharacterized protein; n=1;
Vibrio alginolyticus 12G01|Rep: Putative uncharacterized
protein - Vibrio alginolyticus 12G01
Length = 191
Score = 32.3 bits (70), Expect = 6.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 287 SPETRATHTRTPALVSLRLGSCWKRTKVGRCWN 385
+P TR T++ + + L+ G W R VG WN
Sbjct: 31 APNTRYTYSESGTVTDLKTGLTWMRCPVGMTWN 63
>UniRef50_Q8H740 Cluster: RING-H2 protein; n=1; Medicago sativa|Rep:
RING-H2 protein - Medicago sativa (Alfalfa)
Length = 295
Score = 32.3 bits (70), Expect = 6.6
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 59 PSSSTSLCRLPIRPTSATSRSPVERALAVFKTAQLKRK 172
PSSS+++ P+ PTS+TS S V+ +L +F + +KR+
Sbjct: 38 PSSSSTVRVSPVTPTSSTSSSVVD-SLPIFTFSSIKRR 74
>UniRef50_Q095U2 Cluster: Histidinol dehydrogenase; n=2;
Cystobacterineae|Rep: Histidinol dehydrogenase -
Stigmatella aurantiaca DW4/3-1
Length = 447
Score = 31.9 bits (69), Expect = 8.7
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 501 LVPEPSSALRLPAASIAVAHRSQRPVPVE 415
L PE SAL A +IA AHR+Q+P +E
Sbjct: 96 LKPEVRSALERAARNIATAHRAQKPQAIE 124
>UniRef50_Q0U786 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 968
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 79 VPAAHPPYV-CYVTLPGGACFGSFQNCPTKAEARRRTTLNSINEQRIQRARISADIRPFH 255
V +HPP V + +P G P +R+RTT++ + +R +S + F
Sbjct: 120 VSDSHPPIVQLHAQVPEATKSGDDPTTPLDNSSRKRTTMDVVTSERTTMTSLS---KLFS 176
Query: 256 EKAVAEARASFAGDTSNP 309
E V+ +RA + + P
Sbjct: 177 ETTVSHSRAPSYNNATGP 194
>UniRef50_Q8TN26 Cluster: Putative uncharacterized protein; n=2;
Methanosarcina|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 237
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = -2
Query: 422 QWSSWNTVISSWNSSIVR-PLFASSMNLNAAIP-ALGSWCGLLV 297
Q SS VI++ SIVR P++A+ + + + P ALGSW GLL+
Sbjct: 152 QVSSDQQVITTGVYSIVRHPMYAAGLIIFSGTPLALGSWWGLLI 195
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,777,526
Number of Sequences: 1657284
Number of extensions: 8552694
Number of successful extensions: 29751
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 28671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29735
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -