Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00766
(510 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 4e-40
SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3) 31 0.73
SB_15141| Best HMM Match : RVT_1 (HMM E-Value=1.1) 29 2.2
SB_1136| Best HMM Match : HC2 (HMM E-Value=4.2) 29 2.2
SB_57871| Best HMM Match : RVT_1 (HMM E-Value=0.0029) 29 2.9
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 29 2.9
SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28) 29 2.9
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 29 2.9
SB_25300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 29 2.9
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 29 2.9
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 29 2.9
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 29 2.9
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 29 2.9
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 29 2.9
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_56521| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 28 5.1
SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16) 28 5.1
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 28 5.1
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 28 5.1
SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 27 6.8
SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 27 6.8
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 27 6.8
SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21) 27 6.8
SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 27 6.8
SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 27 6.8
SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) 27 6.8
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 27 6.8
SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05) 27 6.8
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 27 6.8
SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 27 6.8
SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_41606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 27 6.8
SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07) 27 6.8
SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) 27 6.8
SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11) 27 6.8
SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07) 27 9.0
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_57312| Best HMM Match : RVT_1 (HMM E-Value=0.0069) 27 9.0
>SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 161 bits (390), Expect = 4e-40
Identities = 86/163 (52%), Positives = 105/163 (64%), Gaps = 11/163 (6%)
Frame = +1
Query: 1 ALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTKAEARR 180
AL+EFW +K V YE A PPYVC+VTLPGG+CFGSFQ CPTKAEA+R
Sbjct: 172 ALEEFWNMKKAKGAKFKTGDCVSYEPGSAEKPPYVCFVTLPGGSCFGSFQPCPTKAEAKR 231
Query: 181 RTT----LNSINEQRIQRARISADI--RPFHEKAVAEARASFAGDT-----SNPHQDPSA 327
+NS+ + R +I+ D + HE EA+ + T +PH +P+
Sbjct: 232 SAAKIALMNSVFNEHPSR-KITDDFIDQAVHEAQGTEAKVAAKRRTMSLKPQDPH-NPNT 289
Query: 328 GIAAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLRAMRDGN 456
G+ AFRFMLEANKGRTMLEFQELMT+FQLLHWNGSL+AMRD N
Sbjct: 290 GVGAFRFMLEANKGRTMLEFQELMTIFQLLHWNGSLKAMRDRN 332
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 450 RQCSRQEVVAHYSARALDD 506
R CSRQEV AHY+ R +DD
Sbjct: 331 RNCSRQEVFAHYNERIIDD 349
>SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3)
Length = 275
Score = 30.7 bits (66), Expect = 0.73
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 61 LVIYESVPAAHPPYVCY 111
+V+ E +P HPPY+CY
Sbjct: 95 IVVQEDLPTIHPPYLCY 111
>SB_15141| Best HMM Match : RVT_1 (HMM E-Value=1.1)
Length = 402
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 295 TWKTVTDAWNGYHSVPLSSSDRHLTTFITPFGRW 328
>SB_1136| Best HMM Match : HC2 (HMM E-Value=4.2)
Length = 551
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 390 LEFQHRPTFV--RFQHEPKRSDTSAGVLVWVARVSGEGR 280
+ Q P +V R + K +D++ VLVW+ARVS GR
Sbjct: 152 IRIQTNPCYVYGRRKRIEKYTDSNESVLVWMARVSVYGR 190
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 360 RFQHEPKRSDTSAGVLVWVARVSGEGR 280
R + K +D++ VLVW+ARVS GR
Sbjct: 190 RRKRTEKYTDSNESVLVWMARVSVYGR 216
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 342 KRSDTSAGVLVWVARVSGEGR 280
K +D++ VLVW+ARVS GR
Sbjct: 79 KYTDSNESVLVWMARVSVYGR 99
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 342 KRSDTSAGVLVWVARVSGEGR 280
K +D++ VLVW+ARVS GR
Sbjct: 105 KYTDSNKSVLVWMARVSVYGR 125
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 342 KRSDTSAGVLVWVARVSGEGR 280
K +D++ VLVW+ARVS GR
Sbjct: 248 KYTDSNESVLVWMARVSVYGR 268
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 342 KRSDTSAGVLVWVARVSGEGR 280
K +D++ VLVW+ARVS GR
Sbjct: 300 KYTDSNESVLVWMARVSVYGR 320
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 342 KRSDTSAGVLVWVARVSGEGR 280
K +D++ VLVW+ARVS GR
Sbjct: 326 KYTDSNESVLVWMARVSVYGR 346
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 342 KRSDTSAGVLVWVARVSGEGR 280
K +D++ VLVW+ARVS GR
Sbjct: 365 KYTDSNESVLVWMARVSVYGR 385
>SB_57871| Best HMM Match : RVT_1 (HMM E-Value=0.0029)
Length = 195
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 45 TWKTVTDAWNGYHSVPLRSSDRHLTTFITLFGRW 78
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 352 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 385
>SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28)
Length = 1239
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 148 QNCPTKAEARRRTTL-NSINEQRIQ-RARISADIRPFHEKAVAEARASFAGDTSNPHQDP 321
+N T+A + ++ NS E+R Q +A I R F+ KA+++++ GD+ + P
Sbjct: 259 RNMRTEARKDKSDSIWNSFREKRNQLKAMIGKAKRNFYYKALSQSQRCVEGDSPDTPPKP 318
Query: 322 SA 327
SA
Sbjct: 319 SA 320
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 700 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 733
>SB_25300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 156 AVLKTAKARSTGERDVADVGRMGSRHRLVDDE 61
A+ K K R TGER +VG + +R+VD+E
Sbjct: 60 ALEKIRKFRETGERTKFEVGSVKDVYRVVDEE 91
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 237 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 270
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 668 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 701
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +1
Query: 223 ARISADIRPFHEKAVAEARASFAGDTSNPHQDPSAGIAAFRFMLEANKGR 372
A++ DIR HE A R S +G T H PS G R +K R
Sbjct: 24 AKLDRDIRHVHESLRASTRVS-SGFTLFRHSSPSFGSQQMRSYSNLSKSR 72
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 405 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 438
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 702 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 735
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 688 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 721
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 760 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 793
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 257 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 290
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L I G W
Sbjct: 683 TWKTVTDAWNGYHSVPLRSSDRHLTTFITPFGRW 716
>SB_17370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1743
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 133 CFGSFQNCPTKAEARRRTTLNSINEQRIQRARISADIR 246
C SF CP AE + LNS+N Q ++ + A +R
Sbjct: 886 CCLSFP-CPKAAETKHLVLLNSLNSQLVEELAVLAILR 922
>SB_56521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 298 TSNPHQDPSAGIAAFRFMLEANKGRT-MLEFQELMTVF 408
T+ H D SA +RF LE + RT +L+F L VF
Sbjct: 80 TAGSHLDVSATHVIYRFSLERKRKRTQLLDFLALALVF 117
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L + G W
Sbjct: 211 TWKTVTDAWNGYHSVPLRSSDRHLTTFLTPFGRW 244
>SB_36929| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 913
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL S +L I G W
Sbjct: 45 TWKTVTDAWNGYHSVPLRLSDRHLTTFITPFGRW 78
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL S +L I G W
Sbjct: 626 TWKTVTDAWNGYHSVPLRLSDRHLTTFITPFGRW 659
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W TV +WN PL +S +L + G W
Sbjct: 149 TWKTVTDAWNGYHSVPLRSSDRHLTTFLTPFGRW 182
>SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 942
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 114 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 162
>SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 909
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 422 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 470
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 648 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 696
>SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21)
Length = 1405
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV ++WN PL + L I G W
Sbjct: 596 AMESPFHLARRVPMDTWKTVTNAWNGHHSVPLREADRPLTTFITPFGRW 644
>SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 817
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 466 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 514
>SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 795
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 503 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 551
>SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 1485
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 767 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 815
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 286 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 334
>SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05)
Length = 288
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 413 SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W T+ +WN PL +S +L I G W
Sbjct: 105 TWKTLTDAWNGYHSVPLRSSDRHLTTFITPFGRW 138
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 508 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 556
>SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 452
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 216 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 264
>SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14)
Length = 707
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 136 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITLFGRW 184
>SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1412
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 596 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 644
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 114 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 162
>SB_41606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1144
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 133 CFGSFQNCPTKAEARRRTTLNSINEQRIQRARISADIR 246
C SF CP AE + LNS+N Q ++ + A +R
Sbjct: 1002 CCLSFP-CPKAAETKYLVLLNSLNSQLVEELAVLAILR 1038
>SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 670 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 718
>SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 436
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 268 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 316
>SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07)
Length = 303
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 114 AMESPFHLTRRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 162
>SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13)
Length = 776
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 488 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 536
>SB_4973| Best HMM Match : RVT_1 (HMM E-Value=8.6e-11)
Length = 296
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 60 AMESPFHLARRIPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 108
>SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07)
Length = 1286
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + +L I G W
Sbjct: 653 AMESPFHLARRVPKDTWKTVTDAWNGYHSVPLREADRHLTTFITPFGRW 701
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = -2
Query: 458 ALPSRIALSDPFQWSSWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
A+ S L+ +W TV +WN PL + L I G W
Sbjct: 635 AMESPFHLARRVPMDTWKTVTDAWNGYHSVPLRKADRPLTTLITPFGRW 683
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 422 QWSSWNTVISSWNSSIVRPLFASSMN 345
+W V+SSWNSS P++A N
Sbjct: 143 RWCCMGKVLSSWNSSRGGPIYARYKN 168
>SB_57312| Best HMM Match : RVT_1 (HMM E-Value=0.0069)
Length = 503
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 422 QWS-SWNTVISSWNSSIVRPLFASSMNLNAAIPALGSW 312
+W +W TV +WN PL + +L I G W
Sbjct: 72 RWGDTWKTVTDAWNGYHSVPLREADRHLTTFITLFGRW 109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,540,738
Number of Sequences: 59808
Number of extensions: 277628
Number of successful extensions: 802
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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