Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00765
(739 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 142 1e-32
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 138 1e-31
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 127 2e-28
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 124 2e-27
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 120 3e-26
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 116 8e-25
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 113 6e-24
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 110 3e-23
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 109 7e-23
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 109 9e-23
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 106 6e-22
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 105 1e-21
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 105 1e-21
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 104 2e-21
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 104 2e-21
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 103 3e-21
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 100 7e-20
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 95 1e-18
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 94 3e-18
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 93 6e-18
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 93 9e-18
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 9e-18
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 92 1e-17
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 92 1e-17
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 89 8e-17
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 89 1e-16
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 89 1e-16
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 88 2e-16
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 88 2e-16
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 86 7e-16
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 86 7e-16
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 86 7e-16
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 86 1e-15
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 85 1e-15
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 85 1e-15
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 85 1e-15
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 85 1e-15
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 85 2e-15
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 85 2e-15
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 85 2e-15
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 85 2e-15
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 84 3e-15
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 84 4e-15
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 7e-15
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 83 9e-15
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 82 1e-14
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 82 2e-14
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 82 2e-14
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 82 2e-14
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 81 3e-14
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 81 3e-14
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 81 4e-14
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 80 5e-14
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 80 5e-14
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 80 5e-14
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 9e-14
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 79 1e-13
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 78 2e-13
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 78 3e-13
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 77 5e-13
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 77 6e-13
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 77 6e-13
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 77 6e-13
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 77 6e-13
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 77 6e-13
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 76 8e-13
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 76 8e-13
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 76 1e-12
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 75 2e-12
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 75 2e-12
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 74 3e-12
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 74 4e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 74 4e-12
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 73 7e-12
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 72 1e-11
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 72 1e-11
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 72 2e-11
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 72 2e-11
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 71 3e-11
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 3e-11
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 71 4e-11
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 70 5e-11
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 70 7e-11
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 70 7e-11
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 69 9e-11
UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Re... 69 9e-11
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 69 9e-11
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 69 9e-11
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 68 2e-10
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 68 2e-10
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 68 3e-10
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 67 4e-10
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 67 4e-10
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 67 4e-10
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 67 4e-10
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 67 5e-10
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 66 6e-10
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 6e-10
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 66 1e-09
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 66 1e-09
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 66 1e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 65 1e-09
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 65 1e-09
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 64 3e-09
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 64 3e-09
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 64 3e-09
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 64 5e-09
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 64 5e-09
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 64 5e-09
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 63 6e-09
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 63 6e-09
UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD (Asp-... 63 8e-09
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 63 8e-09
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 1e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 62 1e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 62 2e-08
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 62 2e-08
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 61 2e-08
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 61 2e-08
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 61 2e-08
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 61 3e-08
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 61 3e-08
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 60 4e-08
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 60 4e-08
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 60 4e-08
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 60 6e-08
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 60 6e-08
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 60 6e-08
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 6e-08
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 60 6e-08
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 7e-08
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 60 7e-08
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 60 7e-08
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 60 7e-08
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 60 7e-08
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 60 7e-08
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 60 7e-08
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 60 7e-08
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 60 7e-08
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 1e-07
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 59 1e-07
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 59 1e-07
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 59 1e-07
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 59 1e-07
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 59 1e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 59 1e-07
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 59 1e-07
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 59 1e-07
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 58 2e-07
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 2e-07
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 58 2e-07
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 58 2e-07
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 58 2e-07
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 58 2e-07
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 58 2e-07
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 58 2e-07
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 58 2e-07
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 58 2e-07
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 58 2e-07
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 58 3e-07
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 58 3e-07
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 58 3e-07
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 58 3e-07
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 58 3e-07
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 58 3e-07
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 57 4e-07
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 4e-07
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 57 4e-07
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 57 4e-07
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 57 4e-07
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 57 4e-07
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 57 4e-07
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 57 4e-07
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 57 4e-07
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 57 5e-07
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 57 5e-07
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 57 5e-07
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 57 5e-07
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 57 5e-07
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 57 5e-07
UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n... 57 5e-07
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 57 5e-07
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 56 7e-07
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 56 7e-07
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 56 7e-07
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 56 7e-07
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 56 7e-07
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 56 7e-07
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 9e-07
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 56 9e-07
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 56 9e-07
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 56 9e-07
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 56 9e-07
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 56 9e-07
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 56 9e-07
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 56 9e-07
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 56 1e-06
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 56 1e-06
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 56 1e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 56 1e-06
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 56 1e-06
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 56 1e-06
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 56 1e-06
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 55 2e-06
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 55 2e-06
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 55 2e-06
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 55 2e-06
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 55 2e-06
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 55 2e-06
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 55 2e-06
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 55 2e-06
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 55 2e-06
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 55 2e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 55 2e-06
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 55 2e-06
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 55 2e-06
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 55 2e-06
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 55 2e-06
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 55 2e-06
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 55 2e-06
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 55 2e-06
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 55 2e-06
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 55 2e-06
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 55 2e-06
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 54 3e-06
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 54 3e-06
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 54 3e-06
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 54 3e-06
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 54 3e-06
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 54 3e-06
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 54 3e-06
UniRef50_Q0U210 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 54 3e-06
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 54 3e-06
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 54 3e-06
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 54 4e-06
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 54 4e-06
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 54 4e-06
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 54 4e-06
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 54 4e-06
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 54 4e-06
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 54 4e-06
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 54 4e-06
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 54 4e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 54 4e-06
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 54 4e-06
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 54 4e-06
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 54 5e-06
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 5e-06
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 54 5e-06
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 54 5e-06
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 54 5e-06
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 54 5e-06
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 54 5e-06
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 5e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 5e-06
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 5e-06
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 54 5e-06
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 54 5e-06
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 54 5e-06
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 54 5e-06
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 53 6e-06
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 53 6e-06
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 53 6e-06
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 53 6e-06
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 53 6e-06
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 53 6e-06
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 53 6e-06
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 53 6e-06
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 53 6e-06
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 53 6e-06
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 53 8e-06
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 53 8e-06
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 8e-06
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 53 8e-06
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 53 8e-06
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 53 8e-06
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 53 8e-06
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 53 8e-06
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 53 8e-06
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 53 8e-06
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 53 8e-06
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 53 8e-06
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 53 8e-06
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 52 1e-05
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 52 1e-05
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 52 1e-05
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 52 1e-05
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 52 1e-05
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 52 1e-05
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 52 1e-05
UniRef50_Q9NUL7 Cluster: Probable ATP-dependent RNA helicase DDX... 52 1e-05
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 52 1e-05
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 52 1e-05
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 52 1e-05
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 1e-05
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 1e-05
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 52 1e-05
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 52 1e-05
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 52 1e-05
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 52 1e-05
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 52 1e-05
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 1e-05
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 52 1e-05
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 52 1e-05
UniRef50_Q4QJE3 Cluster: ATP-dependent RNA helicase, putative; n... 52 1e-05
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 52 1e-05
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 52 1e-05
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 52 2e-05
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 52 2e-05
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 52 2e-05
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 52 2e-05
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 52 2e-05
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 52 2e-05
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 52 2e-05
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 52 2e-05
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 52 2e-05
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 52 2e-05
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 52 2e-05
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 52 2e-05
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 52 2e-05
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 52 2e-05
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 52 2e-05
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 52 2e-05
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 52 2e-05
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 52 2e-05
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 52 2e-05
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 51 3e-05
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 51 3e-05
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 51 3e-05
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 51 3e-05
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 51 3e-05
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 51 3e-05
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 51 3e-05
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 51 3e-05
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 51 3e-05
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 51 3e-05
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 51 3e-05
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 51 3e-05
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 51 3e-05
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 51 3e-05
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 51 3e-05
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 51 3e-05
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 51 3e-05
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 51 3e-05
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 51 3e-05
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 51 3e-05
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 51 3e-05
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 51 3e-05
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 51 3e-05
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 51 3e-05
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 51 3e-05
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 51 3e-05
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 51 3e-05
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 51 3e-05
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 51 3e-05
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 51 3e-05
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 51 3e-05
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 51 3e-05
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 50 5e-05
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 5e-05
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 50 5e-05
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 50 5e-05
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 50 5e-05
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 50 5e-05
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 50 5e-05
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 50 5e-05
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 50 5e-05
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 50 5e-05
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 50 5e-05
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 50 5e-05
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 50 5e-05
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 50 6e-05
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 50 6e-05
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 50 6e-05
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 6e-05
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 50 6e-05
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 50 6e-05
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 50 6e-05
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 50 6e-05
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 50 6e-05
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 50 6e-05
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 50 6e-05
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 50 8e-05
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 50 8e-05
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 50 8e-05
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 50 8e-05
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 50 8e-05
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 50 8e-05
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 50 8e-05
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 50 8e-05
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 50 8e-05
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 50 8e-05
UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium f... 50 8e-05
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 50 8e-05
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 50 8e-05
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 50 8e-05
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 50 8e-05
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 50 8e-05
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 50 8e-05
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 50 8e-05
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 50 8e-05
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 49 1e-04
UniRef50_Q5FLC8 Cluster: ATP-dependent RNA helicase, DEAD-DEAH b... 49 1e-04
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 1e-04
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 49 1e-04
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 49 1e-04
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 49 1e-04
UniRef50_Q5CR74 Cluster: Dbp7p, eIF4A-a-family RNA SFII helicase... 49 1e-04
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 49 1e-04
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 49 1e-04
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 49 1e-04
UniRef50_A7RQ16 Cluster: Predicted protein; n=1; Nematostella ve... 49 1e-04
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 49 1e-04
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 49 1e-04
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 49 1e-04
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 49 1e-04
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 49 1e-04
UniRef50_UPI0000E48927 Cluster: PREDICTED: similar to DEAD box A... 45 1e-04
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 49 1e-04
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 49 1e-04
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 49 1e-04
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 49 1e-04
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 49 1e-04
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 49 1e-04
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 49 1e-04
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 49 1e-04
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 49 1e-04
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 49 1e-04
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 49 1e-04
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 49 1e-04
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 49 1e-04
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 49 1e-04
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 49 1e-04
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 48 2e-04
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 2e-04
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 48 2e-04
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 48 2e-04
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 48 2e-04
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 48 2e-04
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 48 2e-04
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 48 2e-04
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 48 2e-04
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 48 2e-04
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 48 2e-04
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 48 2e-04
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 48 2e-04
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 48 2e-04
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 48 2e-04
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 48 2e-04
UniRef50_UPI0000E497AE Cluster: PREDICTED: similar to AFL221Cp, ... 48 2e-04
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 48 2e-04
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 48 2e-04
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 48 2e-04
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 48 2e-04
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 48 2e-04
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 48 2e-04
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 142 bits (343), Expect = 1e-32
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +1
Query: 505 FIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 684
F+G+AKTGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA +FG +
Sbjct: 321 FVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSS 380
Query: 685 SYVRNTCVFGGAPKREQ 735
SYVRNTCVFGGAPK Q
Sbjct: 381 SYVRNTCVFGGAPKGGQ 397
Score = 118 bits (283), Expect = 2e-25
Identities = 52/88 (59%), Positives = 62/88 (70%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 427
F +L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 236 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 294
Query: 428 GVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ GYK PT IQAQGWPIAMSG N +
Sbjct: 295 EIRRQGYKAPTAIQAQGWPIAMSGSNFV 322
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 138 bits (335), Expect = 1e-31
Identities = 61/80 (76%), Positives = 73/80 (91%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +GVA+TGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA +FG
Sbjct: 195 RDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFG 254
Query: 679 HTSYVRNTCVFGGAPKREQA 738
++VRNTC+FGGAPK +QA
Sbjct: 255 SNTHVRNTCIFGGAPKGQQA 274
Score = 95.5 bits (227), Expect = 1e-18
Identities = 42/86 (48%), Positives = 57/86 (66%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+L PF KNFY P +VL R+ E E + +E+T+ G +V P FEE FPDYV +
Sbjct: 113 NLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEI 172
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G+ +PT IQAQGWPIAMSG++L+
Sbjct: 173 RKQGFAKPTAIQAQGWPIAMSGRDLV 198
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 127 bits (307), Expect = 2e-28
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AKTGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV DFG
Sbjct: 139 RDMVGIAKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFG 198
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ NTC+FGGA K QA
Sbjct: 199 RRMSIMNTCIFGGASKHPQA 218
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L+PF K+F+ P +VL+RS EV +Y +K+E+T+ G V PI F E+ FP +
Sbjct: 58 LEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFGESGFPSVFLDEMG 117
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G++EPT IQA GW IAMSG++++
Sbjct: 118 RQGFQEPTSIQAVGWSIAMSGRDMV 142
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 124 bits (299), Expect = 2e-27
Identities = 57/79 (72%), Positives = 65/79 (82%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKTLAYI PA+VHI +Q +RRGDGPIALVLAPTRELAQQIQQVA DFG
Sbjct: 160 RDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFG 219
Query: 679 HTSYVRNTCVFGGAPKREQ 735
NTCVFGGAPK Q
Sbjct: 220 QRINANNTCVFGGAPKGPQ 238
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/85 (38%), Positives = 50/85 (58%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L PF K+FY P + S +V+ Y K E+T+ G + P FE+ PDY+ +
Sbjct: 79 LTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYILEEAN 138
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+ +PT IQAQG PIA+SG++++
Sbjct: 139 KQGFSKPTAIQAQGMPIALSGRDMV 163
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 120 bits (290), Expect = 3e-26
Identities = 51/79 (64%), Positives = 67/79 (84%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AKTGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG
Sbjct: 125 RDMVGIAKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFG 184
Query: 679 HTSYVRNTCVFGGAPKREQ 735
++NTC+FGG KR+Q
Sbjct: 185 RAMKIKNTCLFGGGAKRQQ 203
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = +2
Query: 305 KRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 484
+RS E+ E+R E+T G +V +P FEE FP + + + PTPIQ+QGWP
Sbjct: 60 RRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWP 119
Query: 485 IAMSGKNLL 511
IAMSG++++
Sbjct: 120 IAMSGRDMV 128
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 116 bits (278), Expect = 8e-25
Identities = 51/79 (64%), Positives = 64/79 (81%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 134 RDLIGIAETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFG 193
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+S ++NTC++GG PK Q
Sbjct: 194 ASSRIKNTCIYGGVPKGPQ 212
Score = 101 bits (243), Expect = 1e-20
Identities = 42/85 (49%), Positives = 59/85 (69%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L PF KNFY P++ + EVEEYR + E+T+ G +V PI+ F + FPDYV Q ++
Sbjct: 53 LPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGFPDYVLQEIE 112
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+ EPTPIQAQGWP+A+ G++L+
Sbjct: 113 KAGFTEPTPIQAQGWPMALKGRDLI 137
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 113 bits (271), Expect = 6e-24
Identities = 54/104 (51%), Positives = 75/104 (72%)
Frame = +1
Query: 427 RCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG 606
RC G+ +++ +RLA Y+ +G+ KTGSGKTL+Y+LPA++ I+ Q +RRGDG
Sbjct: 17 RCL-RGVNHSNSDPVARLASRYM----VGITKTGSGKTLSYLLPALMPIDEQSRLRRGDG 71
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 738
PIAL+LAPTRELAQQI+QV DFG ++N C+FGG+ KR +
Sbjct: 72 PIALILAPTRELAQQIKQVTDDFGRAIKIKNICLFGGSAKRRSS 115
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 110 bits (265), Expect = 3e-23
Identities = 50/79 (63%), Positives = 61/79 (77%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ FG
Sbjct: 172 RDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFG 231
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+S +RNTCV+GG PK Q
Sbjct: 232 RSSRIRNTCVYGGVPKGPQ 250
Score = 97.9 bits (233), Expect = 2e-19
Identities = 41/86 (47%), Positives = 59/86 (68%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
SL F K+FY HP V RS +VE +R KH++T++G V P++ F+EA FP YV V
Sbjct: 90 SLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEV 149
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
K G+ PT IQ+QGWP+A+SG++++
Sbjct: 150 KAQGFPAPTAIQSQGWPMALSGRDVV 175
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 109 bits (262), Expect = 7e-23
Identities = 47/79 (59%), Positives = 62/79 (78%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG
Sbjct: 289 RDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFG 348
Query: 679 HTSYVRNTCVFGGAPKREQ 735
S R+TC++GGAPK Q
Sbjct: 349 SYSRTRSTCIYGGAPKGPQ 367
Score = 106 bits (255), Expect = 5e-22
Identities = 44/92 (47%), Positives = 63/92 (68%)
Frame = +2
Query: 236 PRLGFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 415
P+ F SL PF KNFY P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 201 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 260
Query: 416 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
Y Q + G+ EPTPIQ+QGWP+A+ G++++
Sbjct: 261 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMI 292
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 109 bits (261), Expect = 9e-23
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V DFG
Sbjct: 267 RDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFG 326
Query: 679 HTS--YVRNTCVFGGAPKREQ 735
S +R TC+FGGA K Q
Sbjct: 327 THSKPLIRYTCIFGGALKGPQ 347
Score = 108 bits (259), Expect = 2e-22
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L+PF K+FY PHP V+ R+P EV+ +R + ++TV G V +P Q FEE NFPD+V +
Sbjct: 186 LEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNFPDFVMNEIN 245
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
MG+ PT IQAQGWPIA+SG++L+
Sbjct: 246 KMGFPNPTAIQAQGWPIALSGRDLV 270
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 106 bits (254), Expect = 6e-22
Identities = 50/79 (63%), Positives = 59/79 (74%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ IG A+TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q F
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFS 210
Query: 679 HTSYVRNTCVFGGAPKREQ 735
S +RNTC +GG PK Q
Sbjct: 211 TESKIRNTCAYGGVPKSGQ 229
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTV-SGVEVHNPIQYFEEANFPDYVQQG 430
+L PF KNFY H + K S EV+E R+KH++T+ G V P+ + FPDYV +
Sbjct: 68 NLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKS 127
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+K PTPIQ QGWPIA+SGK+++
Sbjct: 128 LKNNNIVAPTPIQIQGWPIALSGKDMI 154
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 105 bits (252), Expect = 1e-21
Identities = 48/79 (60%), Positives = 63/79 (79%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A FG
Sbjct: 248 RDMIGIAETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFG 307
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+S ++ + +GG PKR Q
Sbjct: 308 RSSKLKTSVAYGGVPKRFQ 326
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTV-SGVEVHNPIQYFEEANFPDYVQQGV 433
L F KNFY HP V + E +E R E+TV G +V P+ FE +FP Y+ +
Sbjct: 166 LVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILSSI 225
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G+KEPTPIQ Q WPIA+SG++++
Sbjct: 226 EAAGFKEPTPIQVQSWPIALSGRDMI 251
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 105 bits (251), Expect = 1e-21
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A+TGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ FG
Sbjct: 252 DLIGIAQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGS 311
Query: 682 TSYVRNTCVFGGAPK 726
+ + CV+GGAPK
Sbjct: 312 KCKISSVCVYGGAPK 326
Score = 40.7 bits (91), Expect = 0.036
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGV--EVHNPIQYFEEANFPDYVQQG 430
L+PF K FY ++ + E+ Y+ + + + EV P + E FP Y+
Sbjct: 151 LKPFQKVFYQVGKSI--HTDEEIATYQREKGIIIRSKHKEVPQPFIKWNETKFPKYIMSV 208
Query: 431 VKTMGYKEPTPIQAQ 475
++ + EP PIQAQ
Sbjct: 209 IEDSKFSEPMPIQAQ 223
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 104 bits (250), Expect = 2e-21
Identities = 46/78 (58%), Positives = 60/78 (76%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A+TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A FG
Sbjct: 27 DMIGIAETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGS 86
Query: 682 TSYVRNTCVFGGAPKREQ 735
+RNT ++GG PKR Q
Sbjct: 87 IFKLRNTAIYGGVPKRPQ 104
Score = 35.1 bits (77), Expect = 1.8
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
EPT IQ QGWP+A+SG +++
Sbjct: 10 EPTAIQVQGWPVALSGHDMI 29
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 104 bits (250), Expect = 2e-21
Identities = 45/78 (57%), Positives = 63/78 (80%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A+TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + FG
Sbjct: 140 DLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGK 199
Query: 682 TSYVRNTCVFGGAPKREQ 735
+S ++ C++GGA K Q
Sbjct: 200 SSKLKCACIYGGADKYSQ 217
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGV--EVHNPIQYFEEANFPDYVQQ 427
+L F K FY + R+ E+EE+ ++ ++ +V +P + + +FP Y+
Sbjct: 57 NLTTFQKVFYKESQKI--RTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFPQYIMN 114
Query: 428 GVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
V +++P+PIQ+ +P+ +SG +L+
Sbjct: 115 EVTHAKFEKPSPIQSLAFPVVLSGHDLI 142
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 103 bits (248), Expect = 3e-21
Identities = 48/79 (60%), Positives = 60/79 (75%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+AKTGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELAQQI +VA F
Sbjct: 164 DLIGIAKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCD 223
Query: 682 TSYVRNTCVFGGAPKREQA 738
+R TC+FGGA + QA
Sbjct: 224 NLMIRQTCLFGGAGRGPQA 242
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
E ++ + + + +V +P FEE N PD + + + +++PTPIQ+ P+A+ G
Sbjct: 103 EQVQFLKSNAIKLLASDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKG 162
Query: 500 KNLL 511
+L+
Sbjct: 163 HDLI 166
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 99.5 bits (237), Expect = 7e-20
Identities = 44/79 (55%), Positives = 61/79 (77%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V +F
Sbjct: 125 RDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFC 184
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R+T V+GGA + Q
Sbjct: 185 GMFNLRSTAVYGGASSQPQ 203
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F KNFY ++ + +P EV +R +E+ V G V +PIQ FEEA F V + G
Sbjct: 47 FQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKG 106
Query: 446 YKEPTPIQAQGWPIAMSGKNLL 511
+ EPT IQ QGWP+A+SG++++
Sbjct: 107 FSEPTAIQGQGWPMALSGRDMV 128
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QVAADF 675
++ +GVAKTGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+ +
Sbjct: 183 RDIVGVAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKAL 242
Query: 676 GHTSYVRNTCVFGGAPKREQ 735
+ TCV+GG PK Q
Sbjct: 243 TRVPSIMTTCVYGGTPKGPQ 262
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +2
Query: 275 NFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 454
NFY P RS E+ + ++ +T+ G V P+ F + PD + Q G+++
Sbjct: 111 NFYKPQKP---RSEEEIATWLRENSITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQK 167
Query: 455 PTPIQAQGWPIAMSGKNLL 511
PTPIQ+ WP+ ++ ++++
Sbjct: 168 PTPIQSVSWPVLLNSRDIV 186
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 94.3 bits (224), Expect = 3e-18
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+A TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V D G
Sbjct: 66 DMVGIAATGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFDDAGE 124
Query: 682 TSYVRNTCVFGGAPKREQ 735
S VR CV+GGAPK EQ
Sbjct: 125 ASGVRCVCVYGGAPKYEQ 142
Score = 41.1 bits (92), Expect = 0.028
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 311 SPYEVEEYRNKHEVT-VSGVEVH-NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 484
S EV+ R+ VT V G+ P+ F +A F + + T +K P+PIQAQ WP
Sbjct: 2 SASEVQAARDALAVTQVDGLSTDLAPVSSFADAGFSKELLR--VTAQFKTPSPIQAQSWP 59
Query: 485 IAMSGKNLL 511
I MSG +++
Sbjct: 60 IIMSGHDMV 68
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 131 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 190
Score = 91.9 bits (218), Expect = 1e-17
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L F KNFY P+V + EVE YR + E+TV G +V P++ F + FP+YV Q +
Sbjct: 50 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 109
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+ EPTPIQ+QGWP+A+ G++L+
Sbjct: 110 KAGFVEPTPIQSQGWPMALRGRDLI 134
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 92.7 bits (220), Expect = 9e-18
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L F KNFY H V + S +EVEEYR K E+T+ G PI F +A+FP YV +
Sbjct: 43 LPKFEKNFYTEHLEVERTSQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHFPQYVMDVLM 102
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+KEPTPIQAQG+P+A+SG++++
Sbjct: 103 QQNFKEPTPIQAQGFPLALSGRDMV 127
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 92.7 bits (220), Expect = 9e-18
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + F
Sbjct: 355 RDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFT 414
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ + C FGG+ Q
Sbjct: 415 KKLNISSCCCFGGSSIESQ 433
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK- 436
PF K+FY +LK EV R K + + V GV PI + + P + ++
Sbjct: 274 PFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPSTIMSIIEG 333
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y P+ IQAQ P MSG++++
Sbjct: 334 RLNYSSPSSIQAQAIPAIMSGRDII 358
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/80 (53%), Positives = 55/80 (68%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG
Sbjct: 144 RDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFG 203
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ VFGG K EQ+
Sbjct: 204 KAYNIHVVAVFGGGNKYEQS 223
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PFNKNFY+ HP + K+S E+++ R K + VSG P F F + + ++
Sbjct: 64 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 123
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*PK----RVPAKRWP 547
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 124 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 163
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI + F
Sbjct: 635 RDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFL 694
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R C +GGAP REQ
Sbjct: 695 KMMGLRAVCAYGGAPIREQ 713
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 433
++P KNF+ + + EV + R + + + V+G +V P+Q + + V
Sbjct: 553 IEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVV 612
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY++PTPIQ Q P MSG++++
Sbjct: 613 DNLGYEKPTPIQMQALPALMSGRDVI 638
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 89.4 bits (212), Expect = 8e-17
Identities = 39/80 (48%), Positives = 56/80 (70%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AKTGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFC 362
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ C +GG K EQ+
Sbjct: 363 KVYNINPICAYGGGSKWEQS 382
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*PK----RVPAKRWP 547
Y++PTPIQA P A+SG+++L K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI + F
Sbjct: 456 RDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFL 515
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R C +GGAP ++Q
Sbjct: 516 KLLNIRACCAYGGAPIKDQ 534
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+ F K+FY + SP EV+E R + + + G++ P+ + + +
Sbjct: 375 EDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVIN 434
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
++GY++PT IQAQ P SG++++
Sbjct: 435 SLGYEKPTSIQAQAIPAITSGRDVI 459
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +GVAKTGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++
Sbjct: 140 RDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKV- 198
Query: 679 HTSYVRNTCVFGGAPKREQ 735
V CV+GGAPK Q
Sbjct: 199 IPGDVYCGCVYGGAPKGPQ 217
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 293 PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPI 466
P + S E ++R +H +T+ G + P+ F+ P Y+ + + + PTP+
Sbjct: 69 PEAGQLSEEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPV 128
Query: 467 QAQGWPIAMSGKNLL 511
QAQ WP+ +SG++L+
Sbjct: 129 QAQSWPVLLSGRDLV 143
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F
Sbjct: 567 RDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFS 626
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R V+GG+ +Q
Sbjct: 627 KPLGIRCVPVYGGSGVAQQ 645
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/84 (33%), Positives = 47/84 (55%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PF KNFY + + + EV YR + E+ V G +V PI+++ + + +K
Sbjct: 487 EPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKK 546
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y++P PIQ Q PI MSG++ +
Sbjct: 547 LNYEKPMPIQTQALPIIMSGRDCI 570
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A F
Sbjct: 266 RDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFS 325
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R + V+GG K EQ
Sbjct: 326 KAYGLRVSAVYGGMSKHEQ 344
Score = 72.5 bits (170), Expect = 1e-11
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+P NK+FY+ ++ + E +YR + + VSG +VH P++ FE+ F + +K
Sbjct: 186 EPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKK 245
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
Y++PT IQ Q PI +SG++++
Sbjct: 246 QAYEKPTAIQCQALPIVLSGRDVI 269
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 86.2 bits (204), Expect = 7e-16
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKTLA++LP + HI +QPP+ GDGPI L++APTREL QQI F
Sbjct: 522 RDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFA 581
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ V+GG+ +Q
Sbjct: 582 KVVGISCVPVYGGSGVAQQ 600
Score = 62.9 bits (146), Expect = 8e-09
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PF KNFY + +P E+ YR + E+ + G +V P++ + + + +K
Sbjct: 442 KPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDTIKK 501
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y+ P PIQAQ PI MSG++ +
Sbjct: 502 LNYERPMPIQAQALPIIMSGRDCI 525
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 86.2 bits (204), Expect = 7e-16
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFA 401
Query: 679 HTSYVRNTCVFGGAPKREQ 735
++ C +GG EQ
Sbjct: 402 KPLGLKVACTYGGVGISEQ 420
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 442
F KNFY + + + EV+ YR + + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 443 GYKEPTPIQAQGWPIAMSGKNLL 511
Y +PT IQAQ P MSG++++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVI 345
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 86.2 bits (204), Expect = 7e-16
Identities = 39/80 (48%), Positives = 53/80 (66%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI FG
Sbjct: 291 RDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFG 350
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+R+ V+GG EQA
Sbjct: 351 KAYNLRSVAVYGGGSMWEQA 370
Score = 66.5 bits (155), Expect = 6e-10
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 442
PF KNFY+ H + +P ++ + R+K + VSG P F F + + ++
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 443 GYKEPTPIQAQGWPIAMSGKNLL 511
Y +PTPIQ QG P+A+SG++++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMI 294
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 85.8 bits (203), Expect = 1e-15
Identities = 42/80 (52%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA QI A F
Sbjct: 141 RDALGLATTGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAFN 200
Query: 679 HTSYVRNTC-VFGGAPKREQ 735
C +FGGA K EQ
Sbjct: 201 RAGVPARCCAIFGGASKHEQ 220
Score = 37.1 bits (82), Expect = 0.45
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 323 VEEYRNKHEVTVSGVEVHNPIQYFEEANFPD-YVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
VE R +V V G E P++ F + D + + +K +GY+ PT IQAQ P+ G
Sbjct: 82 VEARREALDVRVDG-ETRAPVERFGQGGALDVHAIRALKRLGYETPTGIQAQCIPVICGG 140
Query: 500 KNLL 511
++ L
Sbjct: 141 RDAL 144
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 85.4 bits (202), Expect = 1e-15
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+AKTGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VAA F
Sbjct: 124 DMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCV 183
Query: 682 TSYVRNTCVFGGAPKREQ 735
++ C++GG + Q
Sbjct: 184 KMGYKHVCIYGGEDRHRQ 201
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
E ++Y K+++ + G + FEE N P + + +K + PTPIQ+ PI + G
Sbjct: 63 EQKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKG 122
Query: 500 KNLL 511
+++
Sbjct: 123 NDMV 126
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A+TGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+ + F
Sbjct: 110 DLIGIAQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHISYFSE 166
Query: 682 TSYVRNTCVFGGAPKREQ 735
+ + C++GGA KR Q
Sbjct: 167 AYNMNSACIYGGADKRPQ 184
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +2
Query: 221 AEHATPRLGFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTV--SGVEVHNPIQYF 394
+++A P++ + P K F DP + + V EY ++H + V + ++V P +
Sbjct: 19 SQYAKPQI---NSTPIQKVFIDPTQRIYE--DIVVSEYLDEHSIVVEQNDIQVPQPFIEW 73
Query: 395 EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ FP+ + + + Y PTPIQA +PI MSG +L+
Sbjct: 74 KDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLI 112
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +AKTGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFG 246
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+S + +TC++GGAPK Q
Sbjct: 247 RSSRISSTCLYGGAPKGPQ 265
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 506 LLA 514
++A
Sbjct: 190 VVA 192
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI + F
Sbjct: 514 RDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFI 573
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R CV+GGAP EQ
Sbjct: 574 KALGLRAACVYGGAPISEQ 592
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+PFNK FY P + S + R + + +TV G + P+ + P +K
Sbjct: 433 EPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLDVIK 492
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY PTPIQ+Q P MSG++++
Sbjct: 493 RLGYSAPTPIQSQAMPAIMSGRDII 517
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 85.0 bits (201), Expect = 2e-15
Identities = 38/74 (51%), Positives = 51/74 (68%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A +G
Sbjct: 368 RDCIGIAKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYG 427
Query: 679 HTSYVRNTCVFGGA 720
V+GG+
Sbjct: 428 KALGFNAVSVYGGS 441
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+P K+FY + + + R + + + G +V PI+ + A + + ++
Sbjct: 287 EPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHAGLSGRIHELIR 346
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+++P PIQAQ P+ MSG++ +
Sbjct: 347 RCGFEKPMPIQAQALPVIMSGRDCI 371
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F
Sbjct: 434 RDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFS 493
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ V+GG+ +Q
Sbjct: 494 KALGIICVPVYGGSGVAQQ 512
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PF KNFY + + + V YR + E+ V G +V PIQ++ + + +K
Sbjct: 354 EPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKK 413
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y++P PIQAQ PI MSG++ +
Sbjct: 414 LNYEKPMPIQAQALPIIMSGRDCI 437
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G A+TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F
Sbjct: 156 RDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFS 215
Query: 679 HT-SYVRNTCVFGGAPKREQ 735
+ ++N V GG +Q
Sbjct: 216 RSLESLKNCIVVGGTNIEKQ 235
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEY-RNKHEVTVSG--VEVHNPIQYFEEANFPDYVQQGVKTMGYK 451
+ P V + +P ++EE R +VTVS PI+ F + + + + Y
Sbjct: 80 WQPSERVSRMNPDQIEEVVRLNLDVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYT 139
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
P+ IQAQ PIA+SG++LL
Sbjct: 140 RPSSIQAQAMPIALSGRDLL 159
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI + F
Sbjct: 548 RDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFS 607
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R CV+GG EQ
Sbjct: 608 KSLGLRPVCVYGGTGISEQ 626
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
PF KNFY P + + + +VE+YR+ E + V G PI+ + + + ++
Sbjct: 468 PFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRR 527
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+++PTPIQ Q P MSG++L+
Sbjct: 528 LGFEKPTPIQCQAIPAIMSGRDLI 551
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 84.2 bits (199), Expect = 3e-15
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI + F
Sbjct: 592 RDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFL 651
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R C +GGA ++Q
Sbjct: 652 KAMGLRAVCAYGGAIIKDQ 670
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 433
L PF KNFY + + + E+ + R + + + V+G +V P+Q + + +
Sbjct: 510 LPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVI 569
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY+ PT IQ Q P MSG++++
Sbjct: 570 TKLGYERPTSIQMQAIPAIMSGRDVI 595
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++FIG+A+TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI F
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNCRWFT 601
Query: 679 HTSYVRNTCVFGGA 720
+ C GGA
Sbjct: 602 SILNLNVVCCVGGA 615
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGVEVHNPIQYFEEANFPDYVQQG-V 433
QPF K+FY +++ +P E ++ R + ++ V G +V PIQ + + D V +
Sbjct: 460 QPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLNVLI 519
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + P PIQAQ P MSG++ +
Sbjct: 520 EKKKFINPFPIQAQAVPCIMSGRDFI 545
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 83.0 bits (196), Expect = 7e-15
Identities = 42/98 (42%), Positives = 59/98 (60%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G R A + + + ++ IGVAKTGSGKTLA+ +P I H+ +Q P++ DGPI L+
Sbjct: 528 GYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLI 587
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
LAPTREL+ QI F + S + C +GG P +Q
Sbjct: 588 LAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQ 625
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+PF K+FY + + S +V + R++ + + V +V P+ + +
Sbjct: 466 EPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMDVFT 525
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY PT IQAQ PIA SG++L+
Sbjct: 526 RVGYARPTAIQAQAIPIAESGRDLI 550
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 82.6 bits (195), Expect = 9e-15
Identities = 39/79 (49%), Positives = 52/79 (65%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + VAKTGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG
Sbjct: 269 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFG 327
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+S + + C++GGAPK Q
Sbjct: 328 RSSRISSVCLYGGAPKGPQ 346
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 407 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F + V+ G+ PTPIQAQ WPIA+ ++++A
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVA 273
Score = 33.1 bits (72), Expect = 7.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
E YR KHE+T+ G E P F+ FP + + V
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREV 195
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +AKTGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A FG
Sbjct: 473 RDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFG 531
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+S + TC++GGAPK Q
Sbjct: 532 RSSRISCTCLYGGAPKGPQ 550
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +2
Query: 269 NKNFYDPH----PTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
NK+ PH P V SP E+ YR +HEVT +G + P FE + P + + +
Sbjct: 394 NKSLVRPHFVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELL 451
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
+ G+ PTPIQAQ WPIA+ ++++A
Sbjct: 452 SAGFPSPTPIQAQTWPIALQSRDIVA 477
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/74 (51%), Positives = 49/74 (66%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI + +G
Sbjct: 155 RDCIGVAKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYG 214
Query: 679 HTSYVRNTCVFGGA 720
V+GG+
Sbjct: 215 KAMGFSAVSVYGGS 228
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+P KNFY + + EV++ R + + + G +V PI+ + +A + V + ++
Sbjct: 74 EPVKKNFYIEAKEIASMTKAEVKQLRVELDGIKCRGKKVPKPIKTWAQAGLNNRVHELIR 133
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+++P PIQAQ P+ MSG++ +
Sbjct: 134 RSGFEKPMPIQAQALPVIMSGRDCI 158
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 81.8 bits (193), Expect = 2e-14
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++ A +
Sbjct: 707 RDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPYC 766
Query: 679 HTSYVRNTCVFGGA 720
+R V+GG+
Sbjct: 767 QAVNLRILAVYGGS 780
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVAKTGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ F
Sbjct: 426 RDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFS 485
Query: 679 HTSYVRNTCVFGGA 720
T ++ C +GG+
Sbjct: 486 STMDLKVCCCYGGS 499
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT- 439
F K+FY + E++ R + + V G V P + + P+ V ++
Sbjct: 346 FRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMSVIQND 405
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+ +P+PIQ Q PI +SG++++
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMI 429
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI F
Sbjct: 547 RDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFS 606
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R CV+GGA EQ
Sbjct: 607 KVLGLRTACVYGGASISEQ 625
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F KNFY P + + EV ++R++ V ++G + PIQ + +A + V +K
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQ 528
Query: 446 YKEPTPIQAQGWPIAMSGKNLL 511
Y++PT IQAQ P M+G++L+
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLI 550
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI ++ F
Sbjct: 406 RDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFS 465
Query: 679 HTSYVRNTCVFGGAPKREQ 735
++ ++GGA EQ
Sbjct: 466 RAVGLKTLAIYGGAGIGEQ 484
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +2
Query: 236 PRLGFCSLQ--PFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVEVHNPIQYFEEAN 406
PR+ ++ PF KNFY ++ +EV+ +R + + V G + PI F +
Sbjct: 315 PRVDHTKIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCG 374
Query: 407 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
PD + + ++ Y+ P PIQ Q P M G++++
Sbjct: 375 LPDPILKILEKREYERPFPIQMQCIPALMCGRDVI 409
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/81 (49%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAAD 672
++ IG+A+TG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA QI++ A
Sbjct: 144 EDLIGIAQTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELALQIEKEVAK 202
Query: 673 FGHTSYVRNTCVFGGAPKREQ 735
+ ++ C++GG +R Q
Sbjct: 203 YQFRG-IKAVCLYGGGDRRAQ 222
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRN-KHEVTVSGVEVHNPIQYFEEA--NFPDYVQQGV 433
P K FY+ V P +V +R + + + NP+ F +A +PD +++ +
Sbjct: 63 PLVKMFYNEREEVANMRPEQVAAFREANNNIDNERKPIPNPVSEFHQAFGEYPDLMEE-L 121
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + PTPIQAQ WPI + G++L+
Sbjct: 122 RKQKFTTPTPIQAQAWPILLRGEDLI 147
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 80.2 bits (189), Expect = 5e-14
Identities = 36/86 (41%), Positives = 49/86 (56%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+L PF KNFY P R EV Y ++E+ V+G E + FEE NFP + +
Sbjct: 109 TLPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIKALLTFEECNFPQSILDVI 168
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
K Y +PTPIQA GWPI + GK+++
Sbjct: 169 KEQNYIKPTPIQAIGWPIVLQGKDVV 194
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+A+TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A F
Sbjct: 191 KDVVGIAETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFT 250
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ ++ FGG P+ Q
Sbjct: 251 KGTAIKTVRCFGGVPQSSQ 269
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 80.2 bits (189), Expect = 5e-14
Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +1
Query: 514 VAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TS 687
+AKTGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA QI A F S
Sbjct: 98 MAKTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELASQIANEAHKFTKFGVS 157
Query: 688 YVRNTCVFGGAPKREQ 735
R +FGG KR+Q
Sbjct: 158 GARCCAIFGGVSKRDQ 173
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G++KTGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A +
Sbjct: 178 DMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLR 237
Query: 682 TSYVRNTCVFGGAPKREQ 735
+ ++GGAP+R Q
Sbjct: 238 LVNIEIATIYGGAPRRSQ 255
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
PI E F ++ + +++PTP+Q+ GWPIA+SG ++L
Sbjct: 138 PIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDML 180
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 79.4 bits (187), Expect = 9e-14
Identities = 34/74 (45%), Positives = 52/74 (70%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA QI + F
Sbjct: 441 RDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFL 500
Query: 679 HTSYVRNTCVFGGA 720
+R +C GG+
Sbjct: 501 KVLNIRASCCVGGS 514
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+PF K FY P VL+ E E R + + + + G + P++ + P +K
Sbjct: 360 EPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIK 419
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G++ PT IQAQ P MSG++++
Sbjct: 420 HQGWETPTSIQAQAIPAIMSGRDVI 444
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/79 (45%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +A+TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI ++
Sbjct: 426 RDVLAIAETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLC 485
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R V+GG+P EQ
Sbjct: 486 KLVGIRTKAVYGGSPIGEQ 504
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
QPF KNFY + +EVE +R + + V G PI F + PD + ++
Sbjct: 345 QPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPDPILSLLQ 404
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
Y++P PIQ Q P M G+++LA
Sbjct: 405 RRNYEKPFPIQMQCIPALMCGRDVLA 430
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +AKTGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A FG
Sbjct: 199 RDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFG 257
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+S + C++GGAPK Q
Sbjct: 258 KSSKISCACLYGGAPKGPQ 276
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E Y KHE+TVSG +V P+ FE P+ + + V + G+ P+PIQAQ WPIAM ++
Sbjct: 141 EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRD 200
Query: 506 LLA 514
++A
Sbjct: 201 IVA 203
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/67 (53%), Positives = 45/67 (67%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
AKTGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI FG +R
Sbjct: 184 AKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIR 243
Query: 697 NTCVFGG 717
+ VFGG
Sbjct: 244 SVAVFGG 250
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRN--KHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+P +K Y P + K EV+E R V G PI+ + E +
Sbjct: 96 EPIHKALYVEVPDIKKLKKEEVKEIRRIELEGCIVKGKNCPKPIRTWSECGINPITMDVI 155
Query: 434 KTMGYKEPTPIQAQGWPIAMSG 499
K + Y++P+P+Q Q P+ MSG
Sbjct: 156 KALKYEKPSPVQRQAIPVIMSG 177
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELAQQI++
Sbjct: 351 RDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETV 410
Query: 670 DFGHTSYVRNTCVFGGAPKREQ 735
F H R T + GG EQ
Sbjct: 411 KFAHYLGFRVTSIVGGQSIEEQ 432
Score = 38.7 bits (86), Expect = 0.15
Identities = 14/60 (23%), Positives = 33/60 (55%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R ++ G + P++ +EE+ + + V+ GYK+P+PIQ P+ + ++++
Sbjct: 295 FREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVI 354
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 76.6 bits (180), Expect = 6e-13
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIR-RGDGP 609
K G QR S + IGVA+TG+GKTL+Y++P +H+++QP R +GP
Sbjct: 321 KKAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTLSYLIPGFIHLDSQPISREERNGP 380
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
LVL PTRELA Q++ + + + +++ CV+GG ++EQ
Sbjct: 381 GMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGNRKEQ 421
Score = 53.2 bits (122), Expect = 6e-06
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVE------VHNPIQYFEEA- 403
+ L P KNFY S +V+ +R ++ +T ++ + NP FE+A
Sbjct: 251 WADLPPIKKNFYVESTATSSLSQVQVDAWRQENFNITCEDLKDGEKRPIPNPTCKFEDAF 310
Query: 404 -NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++P+ V + +K G++ PTPIQ+Q WPI + G +L+
Sbjct: 311 EHYPE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLI 346
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/68 (54%), Positives = 45/68 (66%)
Frame = +1
Query: 514 VAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 693
+A+TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A F
Sbjct: 750 IAETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKY 809
Query: 694 RNTCVFGG 717
VFGG
Sbjct: 810 EIVAVFGG 817
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFPDYVQQG- 430
L+ F KNFY + + + EV+ YR N E+ V G EV PI+ + ++ D + +
Sbjct: 651 LEHFQKNFYIESKEISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSDRILEVL 710
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ Y +P PIQ Q P+ MSG++++
Sbjct: 711 IEKKKYDKPFPIQCQSLPVIMSGRDMI 737
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 666
++ IGVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
FG ++ V GGA + +Q
Sbjct: 399 NKFGKLLGIKTVSVIGGASREDQ 421
Score = 60.1 bits (139), Expect = 6e-08
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/79 (45%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGV++TGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI + A +
Sbjct: 357 RDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEEARPYS 415
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R ++GGA K Q
Sbjct: 416 RLLNLRLVPIYGGASKFAQ 434
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVE-VHNPIQYFEEANFPDYVQQGV 433
L K+FYD R E+E H + + G + P+ F+EA F +Q +
Sbjct: 275 LVEIKKDFYDLSYEADSRPGEEIERILKAHNIIIEGEHPLPKPVTTFDEAVFNQQIQNII 334
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
K + EPTPIQ GW ++G++++
Sbjct: 335 KESNFTEPTPIQKVGWTSCLTGRDII 360
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQVA 666
++ IGVA+TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++
Sbjct: 429 RDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEET 488
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
FG +R V GG + +Q
Sbjct: 489 IKFGKPLGIRTVAVIGGISREDQ 511
Score = 54.0 bits (124), Expect = 4e-06
Identities = 19/60 (31%), Positives = 39/60 (65%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + +T G ++ NPI+ +++++ P ++ + + GYKEPTPIQ Q PI + ++++
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 432
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +GVAKTGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+ + +
Sbjct: 100 RDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYA 159
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ + GG K EQ
Sbjct: 160 KIYNISVGALLGGENKHEQ 178
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+ F KNFY HP + K + +VE+ R + E+ VSGV PI F F + + + +
Sbjct: 20 EAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQITK 79
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+++PT IQ Q P +SG++++
Sbjct: 80 LGFEKPTQIQCQALPCGLSGRDIV 103
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 76.2 bits (179), Expect = 8e-13
Identities = 33/79 (41%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFG 678
+ IGVA+TG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+ +++
Sbjct: 280 DLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYS 339
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +++ C++GG + Q
Sbjct: 340 YRG-LKSVCIYGGGDRDGQ 357
Score = 46.8 bits (106), Expect = 6e-04
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGVE------VHNPIQYFEEAN 406
+ L P KNFY S +V+ +R + + + ++ + NP FE+A
Sbjct: 187 WAGLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFEDAF 246
Query: 407 --FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+P+ V + ++ G+++PTPIQ+Q WPI + G +L+
Sbjct: 247 HCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLI 282
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
+ I +A+TG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+ +
Sbjct: 114 DLIAIAQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKYS 173
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ Y ++ CV+GG ++ Q
Sbjct: 174 YKDY-KSVCVYGGGDRKAQ 191
Score = 47.6 bits (108), Expect = 3e-04
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE---VTVSGVE-------VHNPIQYFEEAN 406
L P K FY ++ P EV ++R E + V ++ + P + F EA
Sbjct: 21 LPPIKKQFYIEAESLSALMPEEVNQWRQAKENNNIFVDDLKKEGEKRPIPKPCRTFLEA- 79
Query: 407 FPDY--VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F Y + VK G+ PTPIQ+Q WP+ +SG +L+A
Sbjct: 80 FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIA 117
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA QI++
Sbjct: 361 EDLIGIAQTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELALQIEKEVF 419
Query: 670 DFGHTSYVRNTCVFGGAPKREQ 735
+ ++ C++GG +R Q
Sbjct: 420 KYQFRD-IKAICLYGGGDRRTQ 440
Score = 59.7 bits (138), Expect = 7e-08
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Frame = +2
Query: 272 KNFYDPHPTVLKRSPYEVEEYR-NKHEVTVS---------GVEVHNPIQYFEEA--NFPD 415
KNFY+ P V +P EV E+R + + V + NP+Q FE+A +P+
Sbjct: 274 KNFYNELPEVANMTPEEVSEFRCANNNIVVDRTFKDADKPSAPIPNPVQTFEQAFHEYPE 333
Query: 416 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+++ +K G+ +P+PIQAQ WP+ + G++L+
Sbjct: 334 LLEE-IKKQGFAKPSPIQAQAWPVLLKGEDLI 364
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
+ IGVAKTGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL QQ+ +
Sbjct: 226 RNVIGVAKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTRELGQQVYLETKKYA 285
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ + + GG K Q
Sbjct: 286 QLFQISVSALLGGENKHHQ 304
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/84 (26%), Positives = 42/84 (50%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+ F NFY H + + +VE+ + ++++ V G V PI F + +
Sbjct: 146 EEFESNFYQEHEEIANLNVAQVEKIKREYQIHVKGNNVPKPIISFGHLQLDQKLVNKIVA 205
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+++PT IQ+Q P +SG+N++
Sbjct: 206 QNFEKPTAIQSQALPCVLSGRNVI 229
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAA 669
K+ IG+A+TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ
Sbjct: 287 KDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGN 346
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F R V GG EQ+
Sbjct: 347 KFAEPLGFRCVSVVGGHAFEEQS 369
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/59 (28%), Positives = 36/59 (61%)
Frame = +2
Query: 335 RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + +++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+
Sbjct: 232 KEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLI 290
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/74 (41%), Positives = 50/74 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++ A +
Sbjct: 761 RDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYC 820
Query: 679 HTSYVRNTCVFGGA 720
+ V+GG+
Sbjct: 821 KAVNIEILAVYGGS 834
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +1
Query: 487 SYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQ 657
S ++ +G+A+TGSGKT A+++P +++I+ QP + + DGP ALV+APTREL QQI+
Sbjct: 447 SLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIE 506
Query: 658 QVAADFGHTSYVRNTCVFGGAPKREQA 738
+ +F R + GG +QA
Sbjct: 507 KETRNFAQHFGFRVVSLVGGQSIEDQA 533
Score = 51.6 bits (118), Expect = 2e-05
Identities = 18/60 (30%), Positives = 40/60 (66%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ ++ G NPI+ ++E+N P + + ++ +GY++P+PIQ Q PI+++G+++L
Sbjct: 395 FKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDIL 454
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ IG++KTGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI +
Sbjct: 290 RDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKL 349
Query: 676 GHTSYVRNTCVFGGAPKREQ 735
+ + C GG+ ++Q
Sbjct: 350 ISDLDISSICCTGGSDLKKQ 369
Score = 37.1 bits (82), Expect = 0.45
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
L P +K Y+ + + E+ + R + + + G + P+ + + P + + +
Sbjct: 207 LDPISKCLYNEPEEIKSYTEDEIADLRLDLDNIKIEGKDCPRPVTKWSQLGIPYDIIRFI 266
Query: 434 KTM-GYKEPTPIQAQGWPIAMSGKNLL 511
K + YK TPIQ Q P MSG++++
Sbjct: 267 KDVFSYKSLTPIQTQTIPAIMSGRDVI 293
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 603
+ NG ++ S ++ IGV++TGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 604 ---GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
P LVL+PTRELAQQI+ + + Y ++ C++GG + EQ
Sbjct: 160 QKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQ 205
Score = 39.5 bits (88), Expect = 0.084
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPIQYFEEAN 406
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 407 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVAADFG 678
+ +G+A TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V
Sbjct: 149 DLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSI 208
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ +R C +GG K +Q+
Sbjct: 209 RGTSIRQLCAYGGLGKIDQS 228
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +2
Query: 329 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
E+R KH V + G NP Q F + FP Q + G+ PT IQ Q WPI + G +L
Sbjct: 93 EWRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDL 150
Query: 509 L 511
+
Sbjct: 151 V 151
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/79 (50%), Positives = 49/79 (62%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKTLAY LP I+H QP + GP LVLAPTRELAQQIQ
Sbjct: 470 RDVIAIAETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQS-----Q 521
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ + R CV+GG K Q
Sbjct: 522 YELFTRTCCVYGGVFKNLQ 540
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQIQQVA 666
++ IG+AKTGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI V
Sbjct: 152 RDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVL 211
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
+ G +++ CV+GG+ K Q
Sbjct: 212 REAGEPCGLKSICVYGGSSKGPQ 234
Score = 41.5 bits (93), Expect = 0.021
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEV--HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
E E + K VT GVE + ++ F E+N P+ V KT +++P+PIQ+ WP +
Sbjct: 92 EGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLL 149
Query: 494 SGKNLL 511
G++L+
Sbjct: 150 DGRDLI 155
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ IG++KTGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI + F
Sbjct: 294 RDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKF 353
Query: 676 GHT-SYVRNTCVFGGAPKREQ 735
+ +R+ C GG+ ++Q
Sbjct: 354 TEADTSIRSVCCTGGSEMKKQ 374
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANF-PDYVQQG 430
L+PF KNFY TV S EVEE R + + + G P+ + + D +
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLI 270
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + + TPIQ+Q P MSG++++
Sbjct: 271 TEKLHFGSLTPIQSQALPAIMSGRDVI 297
>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 1123
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +1
Query: 487 SYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
+Y ++ IG+AKTGSGKT +YI+PAI H+ Q +GP L++APT+ELAQQI+ A
Sbjct: 776 AYAGRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPTKELAQQIEIKA 832
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
S ++ ++ +REQ
Sbjct: 833 NQLLENSPIKAVAIYASPNRREQ 855
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 70.9 bits (166), Expect = 3e-11
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELAQQIQQV 663
++ IGVA TGSGKT A++LP +V+I P + R+ DGP A++LAPTRELAQQI+
Sbjct: 415 RDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENE 474
Query: 664 AADFGHTSYVRNTCVFGGAPKREQA 738
A F + + GG EQ+
Sbjct: 475 ARKFCNPLGFNVVSIVGGHSLEEQS 499
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/60 (26%), Positives = 35/60 (58%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ ++ G + NP++ + E+ P + + + +GYK+P+PIQ PIA+ ++L+
Sbjct: 359 FKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLI 418
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 70.5 bits (165), Expect = 4e-11
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRELAQQI 654
K+ +G+A+TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELAQQ
Sbjct: 211 KDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQS 270
Query: 655 QQVAADFGHTSYVRNTCVFGGAPKREQA 738
+ + FG +++ C+FGG K QA
Sbjct: 271 HEHLSAFGEQVGLKSVCIFGGVGKDGQA 298
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++FIG+A TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 670 DFGHTSYVRNTCVFGGAPKREQ 735
+ G + + C++GG K Q
Sbjct: 189 EAGAPCGISSVCLYGGTSKGPQ 210
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 69.7 bits (163), Expect = 7e-11
Identities = 29/74 (39%), Positives = 50/74 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++ A+ +
Sbjct: 607 RDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASIYC 666
Query: 679 HTSYVRNTCVFGGA 720
++ V+GG+
Sbjct: 667 KAVDLKILAVYGGS 680
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFG 678
+ IGVA+TG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++ +
Sbjct: 281 DLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS 340
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R+ CV+GG + EQ
Sbjct: 341 YKG-LRSVCVYGGGNRDEQ 358
Score = 51.2 bits (117), Expect = 3e-05
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGVE------VHNPIQYFEEAN 406
+ L P KNFY S E + +R ++ +T ++ + NP F++A
Sbjct: 188 WADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAF 247
Query: 407 --FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+P+ V + +K G+++PTPIQ+Q WPI + G +L+
Sbjct: 248 QCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLI 283
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 69.3 bits (162), Expect = 9e-11
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + AKTGSGKTL Y LP I H +QP +G+GPI LVL PT+ELA Q+ + + G
Sbjct: 85 RDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGLVLVPTQELAMQVFTLLDELG 144
Query: 679 HTSYVRNTCVFG 714
+ +R +G
Sbjct: 145 EAARLRCVASYG 156
Score = 42.7 bits (96), Expect = 0.009
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEY-RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P +FY P + + E+ E R V G +V PI+ + PD V + ++
Sbjct: 5 PIRTDFYVVPPDMTNLTAQEMRELLRELDGAKVRGQDVPRPIRSWHGTGLPDRVLEVLEE 64
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
YK P +Q+ G P MSG++LL
Sbjct: 65 HEYKCPFAVQSLGVPALMSGRDLL 88
>UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Rep:
AFR452Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 287
Score = 69.3 bits (162), Expect = 9e-11
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAA 669
++++GVA TGSGKTLA++LP + P+ R DGP ALVLAPTRELAQQI+ A
Sbjct: 195 RDYVGVAATGSGKTLAFLLPIFAKLGRMAPLNAVTRQDGPRALVLAPTRELAQQIEAQAR 254
Query: 670 DF 675
F
Sbjct: 255 QF 256
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/59 (52%), Positives = 46/59 (77%), Gaps = 4/59 (6%)
Frame = +1
Query: 496 WKEFIGVAKTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ 660
+++F+GVA TGSGKTLA+++P ++ ++ PP ++ DGP AL+LAPTREL QQIQ+
Sbjct: 214 YRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQK 272
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IGVAKTGSGKT A+++P + +I + PP+ R GP AL++APTRELAQQI+
Sbjct: 353 RDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETR 412
Query: 670 DFGHTSYVRNTCVFGGAPKREQ 735
F + + GG EQ
Sbjct: 413 RFALPLGYKCVSIVGGRSVEEQ 434
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + G + +P++ + E+ P + ++ +GYKEP+PIQ Q PI M ++L+
Sbjct: 297 FREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLI 356
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ IG++KTGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI + F
Sbjct: 315 RDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKF 374
Query: 676 -GHTSYVRNTCVFGGAPKREQ 735
+R C GG+ ++Q
Sbjct: 375 TKQDRSIRTICCTGGSEMKKQ 395
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFP-DYVQQG 430
L+PF K+FY V + EVEE R + + V G I + + P D +
Sbjct: 232 LEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQLGLPTDIMNLI 291
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
K + Y EPT IQ+Q P MSG++L+
Sbjct: 292 TKELKYDEPTAIQSQAIPAIMSGRDLI 318
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA QI +
Sbjct: 736 RDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETN 795
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F R V GG QA
Sbjct: 796 KFASYCSCRTVAVVGGRNAEAQA 818
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/60 (35%), Positives = 38/60 (63%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R +E+ + G V PI+ +EE+N + + + +K Y++PTPIQ Q PIA+ ++L+
Sbjct: 680 FREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 739
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKT A++LP + ++ PP+ DGP AL+LAP+RELA QI
Sbjct: 377 RDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDETV 436
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F R+ V GG QA
Sbjct: 437 KFSAFCSCRSVAVVGGRNAESQA 459
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R E+ + G V PI+ + E+ P + + +K GY +PTPIQ Q PIA+ ++L+
Sbjct: 321 FREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDLI 380
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 67.7 bits (158), Expect = 3e-10
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQ 660
++ + A+TGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI
Sbjct: 195 RDLMACAQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYG 254
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQ 735
A F + + VR V+GGA R Q
Sbjct: 255 EARKFTYHTPVRCVVVYGGADPRHQ 279
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P+ F E N + + VK GY +PTP+Q+ G P A++ ++L+A
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMA 199
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQI 654
++ + A+TGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI
Sbjct: 169 RDLMSCAQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQI 228
Query: 655 QQVAADFGHTSYVRNTCVFGGAPKREQ 735
+ A F + +R+ CV+GG+ Q
Sbjct: 229 YEEAVRFTEDTPIRSVCVYGGSDSYTQ 255
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A+TGSGKTLA++LPAIVHI Q R P L+LAPTREL QI F
Sbjct: 173 DLIGIAQTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQIYDQFQKFSV 229
Query: 682 TSYVRNTCVFGG 717
S + C++GG
Sbjct: 230 GSQLYAACLYGG 241
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = +2
Query: 323 VEEYRNKHEVTVSG--VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
++EYR +H + + V V +PI FE+ FP + + G+K PT IQAQGW IA+
Sbjct: 110 IKEYRAQHNIFIRSQHVTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIAL 169
Query: 494 SGKNLL 511
+G +L+
Sbjct: 170 TGHDLI 175
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQVA 666
+ IG+A+TGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+
Sbjct: 133 DVIGIAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEI 192
Query: 667 ADFGHTSYVRNTCVFGGAPKRE 732
F ++ C++GG R+
Sbjct: 193 QLFTQNYRLKTLCIYGGINNRK 214
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 332 YRNKHEV--TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
YR K + T +V P + A FP + + ++ + +K PT IQ+ +PI ++G +
Sbjct: 74 YREKEIIIKTFENQKVPPPFLSWASAGFPIPILESIEQLQFKSPTIIQSVVFPIILAGYD 133
Query: 506 LL 511
++
Sbjct: 134 VI 135
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG++KTGSGKT A++LP + +I PP + + +GP AL+LAPTRELA QIQ
Sbjct: 295 RDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVI 354
Query: 670 DFGHTSYVRNTCVFG 714
F C+ G
Sbjct: 355 KFATRMGFTVVCLIG 369
Score = 53.6 bits (123), Expect = 5e-06
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
E+ G + NP++++EE+N P ++ +K +GY EPTP+Q PIA+ ++L+
Sbjct: 244 EIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLI 298
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT A++LP + ++ PP+ DGP AL++AP+RELA QI
Sbjct: 619 RDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETN 678
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F R V GG QA
Sbjct: 679 KFASYCSCRTVAVVGGRNAEAQA 701
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R +E+ + G V PI+ +EE+N + + +K Y++PTPIQ Q PIA+ ++L+
Sbjct: 563 FREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 622
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 66.5 bits (155), Expect = 6e-10
Identities = 34/100 (34%), Positives = 52/100 (52%)
Frame = +1
Query: 436 DNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
D G+ + ++ L DS ++ +G +TGSGKT A++LP + + + P A
Sbjct: 25 DRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLVARLTASGRPAQARKPRA 84
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
LVLAPTREL QI++ T+ + VFGG + Q
Sbjct: 85 LVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQ 124
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 66.5 bits (155), Expect = 6e-10
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAAD 672
++ IG++KTGSGKT+++ILP + I Q P+ GD GP+ L+L+PTRELA QI +
Sbjct: 275 RDVIGISKTGSGKTVSFILPLLRQIKAQRPL-GGDETGPLGLILSPTRELALQIHEEVTK 333
Query: 673 F--GHTSYVRNTCVFGGAPKREQ 735
F G S +R+ C GG+ + Q
Sbjct: 334 FTSGDPS-IRSLCCTGGSELKRQ 355
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
L+PF KNFY + K S EV + R + V V G + PI + + + +
Sbjct: 192 LKPFIKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLL 251
Query: 434 -KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + + PTPIQAQ P MSG++++
Sbjct: 252 TRELEFTVPTPIQAQAIPAIMSGRDVI 278
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+A+TG+GKT A+ LP I + P +G A++L+PTRELA QI + FG
Sbjct: 141 KDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFG 200
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ T GGAP R+Q
Sbjct: 201 KRLPLNFTHAIGGAPIRKQ 219
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/80 (46%), Positives = 46/80 (57%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ IG A TG+GKT A++LP I + +P R ALVLAPTRELA QI + FG
Sbjct: 42 KDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALVLAPTRELALQIGEELERFG 95
Query: 679 HTSYVRNTCVFGGAPKREQA 738
H VR + GG +QA
Sbjct: 96 HARRVRGAVIIGGVGMAQQA 115
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E + ++ G++ PTPIQAQ P A++GK+++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVI 45
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI----RRGDG--PIALVLAPTRELAQQIQQ 660
K+ +G A+TG GKTLA++LP + + P+ RR G P+ +VLAPTRELA+Q+
Sbjct: 121 KDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQVFA 180
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQ 735
G++ ++ CV+GG P REQ
Sbjct: 181 DFDWIGNSFGFKSVCVYGGTPYREQ 205
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+ ++
Sbjct: 78 RDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEML 137
Query: 679 HTSYVRNTCVFGGAPKREQ 735
V GG P Q
Sbjct: 138 DVIRCPGNPVCGGVPVSTQ 156
Score = 50.4 bits (115), Expect = 5e-05
Identities = 28/98 (28%), Positives = 48/98 (48%)
Frame = +2
Query: 275 NFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 454
++YD + V + S V+E R K+ + + G + PI+ F + N P + + ++
Sbjct: 3 SYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQV 62
Query: 455 PTPIQAQGWPIAMSGKNLLA*PKRVPAKRWPTSCQPLC 568
PTPIQ Q MSG++++ + K S PLC
Sbjct: 63 PTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 99
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 496 WKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
WK+ I A TG+GKT A+ +P + HI+ + D ALVLAPTRELA QIQ D
Sbjct: 49 WKDVIAKAPTGTGKTFAFGIPMVEHIDPE-----SDAVQALVLAPTRELALQIQDELRDL 103
Query: 676 -GHTSYVRNTCVFGGAPKREQ 735
VR+ C++GGAP +Q
Sbjct: 104 CEFKEGVRSVCLYGGAPIEKQ 124
>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein;
n=2; Oligohymenophorea|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 749
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 669
K+ IG+++TG+GKT A+++P I ++ + PP+ DGP AL+L PTRELA QI++
Sbjct: 361 KDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILIPTRELAPQIEKEFQ 420
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
+ +++ + GG + QA
Sbjct: 421 NLTSNMRMKSLVMVGGKDEGNQA 443
Score = 49.6 bits (113), Expect = 8e-05
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R +++ + G V P++ +EE P Y+ V+ Y++PTPIQ Q PI + K+L+
Sbjct: 305 FREDNDIIIKGGRVPKPMRTWEEGELPPYILDAVRRSKYEKPTPIQMQTIPIGLQRKDLI 364
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAA 669
++ IG++ TGSGKT A++LP + +I+ PP+R + +GP ALV+ PTRELA QI++
Sbjct: 248 RDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETV 307
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F + + G +QA
Sbjct: 308 KFSRYLGFKAVSITGWESIEKQA 330
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT ++++P + +I+ P + + GP AL+L PTRELAQQI+
Sbjct: 305 RDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETETN 364
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F +R + GG +QA
Sbjct: 365 KFAGRLGLRCVSIVGGRDMNDQA 387
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +2
Query: 269 NKNFYDPHPTVLKRSPYEVEEYRNKHE---VTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+K F D H + S + ++R E ++ G + P++ + E+ P + ++
Sbjct: 225 DKRFDDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIPASILSTIEE 284
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+GYKEP+PIQ Q PI + ++L+
Sbjct: 285 VGYKEPSPIQRQAIPIGLQNRDLI 308
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 669
++ I +A+TG+GKT AY++P I + P + GP ALVLAPTRELA QIQ+
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 670 DFGHTSYVRNTCVFGGAPKREQ 735
+R C GG P + Q
Sbjct: 274 KLATPFGLRVCCCIGGEPMQPQ 295
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 335 RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
R + V+ EV P++ +++ N D + +K + Y+ PTPIQ PIA+ ++L+A
Sbjct: 160 RENLNIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIA 218
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/89 (37%), Positives = 50/89 (56%)
Frame = +1
Query: 469 SSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 648
++ L DS ++ +G +TGSGKT A++LP + ++ R+ P AL+LAPTRELA
Sbjct: 46 AATLPDSLAGRDVLGRGRTGSGKTYAFLLPMLARLSAGGTRRQAKRPRALILAPTRELAI 105
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
QI + A + + VFGG + Q
Sbjct: 106 QIDEALAPLAQPLGITSKTVFGGVGQGPQ 134
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +GVA+TGSGKT A+ +PAI H+ N R G LV++PTRELA QI
Sbjct: 150 KDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNLIVLT 206
Query: 679 HTSYVRNTCVFGGAPKREQ 735
++ CV+GG PK EQ
Sbjct: 207 DKVGMQCCCVYGGVPKDEQ 225
Score = 37.1 bits (82), Expect = 0.45
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 FYDPHPTVLKRSPYEVEEYRNKHEVTVS-GVEVH-NPIQYFEEANFPDYVQQGVKTMGYK 451
FY + +++EY ++E+ V +++ P+ F+ + +Q + +
Sbjct: 76 FYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FP 133
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
+PTPIQA WP +SGK+++
Sbjct: 134 KPTPIQAVAWPYLLSGKDVV 153
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
+ IG+A+TG+GKTLA++LP ++H Q P RG G LVLAPTRELA QI+ +
Sbjct: 322 DMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKY 380
Query: 676 GHTSYVRNTCVFGGAPKREQ 735
++ CV+GG + Q
Sbjct: 381 SFRG-MKAVCVYGGGNRNMQ 399
Score = 57.6 bits (133), Expect = 3e-07
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGV----------EVHNPIQYFEE--A 403
P KNFY P V + E+E R ++ ++TVS V + NP+ FE+ A
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 404 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+PD +++ K MG+ +P+PIQ+Q WPI + G +++
Sbjct: 290 EYPDMLEEITK-MGFSKPSPIQSQAWPILLQGHDMI 324
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 63.7 bits (148), Expect = 5e-09
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQ---PPIRRGD 603
+ G++R + Y K+ +G AKTG+GKTLA++LP I + + P + G
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGR 139
Query: 604 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
P+ LVL PTRELAQQ+ + V+GG+P+ Q
Sbjct: 140 RPLVLVLLPTRELAQQVSNEFELMKGKDRYKVCSVYGGSPEYPQ 183
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 63.7 bits (148), Expect = 5e-09
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +1
Query: 430 CKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHI-NNQPPIRRGDG 606
CK+ + S + + + IG+A+TGSGKT A+ +P + + ++Q P
Sbjct: 96 CKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPY----- 150
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 738
A +LAPTRELAQQI++ G VR+TC+ GG +QA
Sbjct: 151 -YACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQA 193
Score = 34.3 bits (75), Expect = 3.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E N + Q K + Y +PTPIQ++ P A+ G +++
Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDII 122
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 63.3 bits (147), Expect = 6e-09
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ G+A+TG+GKT A+ LP+I ++ P R G L+L+PTRELA QI + D+
Sbjct: 44 KDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYT 103
Query: 679 HTSYVRNTCVFGGAP 723
+ VFGG P
Sbjct: 104 RHLRMSVNAVFGGVP 118
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
F+ + Q + +GY +PTPIQAQ P + GK+L
Sbjct: 8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDL 46
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 63.3 bits (147), Expect = 6e-09
Identities = 36/98 (36%), Positives = 48/98 (48%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G+ A S L D ++ +G A+TGSGKTL + LP + + Q R P LV
Sbjct: 165 GMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLV 224
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
L PTRELA Q+ G + +R + V GG P Q
Sbjct: 225 LVPTRELAMQVADALRPLGDSLDLRLSVVVGGVPYGRQ 262
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 63.3 bits (147), Expect = 6e-09
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IGVA+TGSGKT ++++P I +I P + + +GP L+LAPTRELA QI+ A
Sbjct: 201 RDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAV 260
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F + V GG +EQA
Sbjct: 261 KFCAPLGFKVVSVVGGYSAQEQA 283
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
VT G + NP++ + E P V+ + MGYKEPTPIQ PIA+ ++++
Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVI 204
>UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 474
Score = 62.9 bits (146), Expect = 8e-09
Identities = 25/77 (32%), Positives = 47/77 (61%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HP + + +P +V++ RN+ ++ V G+ + PI FE+ P + +++ GY PT
Sbjct: 326 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKIHSNLQSSGYITPT 385
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ Q PI+++ ++L+
Sbjct: 386 PIQMQAIPISLALRDLM 402
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 487 SYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 663
S ++ + A+T SGKTL++++PA++ I NQ G P L+ PTRELA QI++
Sbjct: 395 SLALRDLMICAQTSSGKTLSFLVPAVMTIYNQVLTGVGSKDPHVLIFTPTRELAMQIEEQ 454
Query: 664 A 666
A
Sbjct: 455 A 455
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 62.9 bits (146), Expect = 8e-09
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 687
+G+A+TGSGKT AY++PAI ++ NQ R GP L++A TREL +QIQ+ +
Sbjct: 527 VGIAQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRELVKQIQEFGEILTKNT 583
Query: 688 YVRNTCVFGGAPKREQ 735
V+ +GG R Q
Sbjct: 584 SVKVAVAYGGENNRRQ 599
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 311 SPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIA 490
S E E+++ + + + G H Q+ + P+ Q V+ + EPTPIQ PI
Sbjct: 462 SDQEFEDFKIRENIKIIGDCPHRLFQFNPQMMLPELFQN-VREQNWTEPTPIQKIAIPIV 520
Query: 491 MSGKNLL 511
MSG NL+
Sbjct: 521 MSGMNLV 527
>UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 558
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +1
Query: 430 CKDNGLQRTDAHSS-SRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHI-NNQPPIRRGD 603
C+D +T +H + + + K+ + A+TGSGKTLAY+LP I I N P ++R D
Sbjct: 22 CEDKLQVKTYSHVQYAAIPEILQEKDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTD 81
Query: 604 GPIALVLAPTRELAQQIQQV 663
G L+L PTREL QQ+ V
Sbjct: 82 GLFCLILTPTRELTQQVYDV 101
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKT A+ LP + I RR AL+LAPTRELA QI+Q +
Sbjct: 125 QDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVS 184
Query: 679 HTSYVRNTCVFGGAPKREQ 735
++++ V GG K Q
Sbjct: 185 KSAHISTALVLGGVSKLSQ 203
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HP ++ ++E + + ++V G EV PI FE FP+ + Q +K GY+ PT
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 461 PIQAQGWPIAMSGKNLLA 514
PIQ Q P+ + G+++LA
Sbjct: 228 PIQMQMIPVGLLGRDILA 245
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + A TGSGKT A++LP I+ + P AL+L PTRELA QI++ A +
Sbjct: 241 RDILASADTGSGKTAAFLLPVIIR-----ALPEDKTPSALILTPTRELAIQIERQAKELM 295
Query: 679 H-TSYVRNTCVFGGAP 723
++ + GG P
Sbjct: 296 RGLPRMKTVLLVGGLP 311
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 PFNKNF-YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P N ++ Y HP +L ++E + + + V G EV PI FE + P+ + +K
Sbjct: 161 PLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKK 220
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA 514
GY+ PTPIQ Q P+ + G+++LA
Sbjct: 221 SGYEVPTPIQMQMIPVGLLGRDILA 245
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD-F 675
++ + A TGSGKT A++LP I+ + P AL+L PTRELA QI++ A +
Sbjct: 241 RDILASADTGSGKTAAFLLPVIMR-----ALFESKTPSALILTPTRELAIQIERQAKELM 295
Query: 676 GHTSYVRNTCVFGGAP 723
++ + GG P
Sbjct: 296 SGLPRMKTVLLVGGLP 311
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/95 (33%), Positives = 53/95 (55%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
+D G R A ++ + + ++ +G A TG+GKT AY+LPA+ H+ + P + G P
Sbjct: 20 QDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGP-PR 78
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 717
L+L PTRELA Q+ A + +++ + GG
Sbjct: 79 ILILTPTRELAMQVSDHARELAKHTHLDIATITGG 113
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELAQQIQ 657
K+ +G+A+TGSGKT A+ LPA+ H+ + + +G LV+APTRELA Q +
Sbjct: 197 KDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTE 256
Query: 658 QVAADFGHTSYVRNTCVFGGAPKREQ 735
+ A G + + C++GG K+EQ
Sbjct: 257 ENMAKLGKSMGIGMICLYGGVSKQEQ 282
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Frame = +2
Query: 311 SPYEVEEYRNKHEVTVSGVEVHN-----PIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQ 469
+P + H +T+ E N P+ F E + V++ + + G+ PTPIQ
Sbjct: 127 NPAAARAFVESHNITIEAPEESNERPPLPMVDFRELDGKVDAAVKKTLDSQGFSTPTPIQ 186
Query: 470 AQGWPIAMSGKNLL 511
A WP+ + K+++
Sbjct: 187 ACCWPVLLQNKDVV 200
>UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF13614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1027
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQ 651
++TGSGKTL+Y +P + + QP + RGDGP+AL+L PTRELAQQ
Sbjct: 124 SQTGSGKTLSYAIPVVQSLQALQPKVSRGDGPLALILVPTRELAQQ 169
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYVRN 699
TGSGKT A++LP+I + +P ++ GP LVL PTRELA Q+++ A +G R
Sbjct: 47 TGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRT 105
Query: 700 TCVFGGAP 723
C+ GGAP
Sbjct: 106 ACLVGGAP 113
Score = 33.5 bits (73), Expect = 5.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E + + V GY+ TP+Q Q P A+SG +LL
Sbjct: 3 FSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLL 42
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Candida glabrata|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 582
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ 660
++ +G+A TGSGKTLA+ +P + ++ P ++ DGP+ALVL PTRELAQQI Q
Sbjct: 214 RDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQ 271
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 60.9 bits (141), Expect = 3e-08
Identities = 41/97 (42%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +1
Query: 445 LQRTDAHSSSRLADSYVW------KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG 606
LQR + S++ Y W ++ IGVA TGSGKTLA++LP + H+ Q G
Sbjct: 121 LQRAGFPAPSQI-QQYTWPLAAQMRDTIGVAATGSGKTLAFLLPGMAHVAAQV----GTE 175
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 717
P LVLAPTREL QI A F +R FGG
Sbjct: 176 PRMLVLAPTRELVMQIATEAEQFALGFRLRLGLAFGG 212
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A
Sbjct: 180 RDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQ 239
Query: 670 DFGHTSY----VRNTCVFGGAPKREQA 738
+ ++ +R + GG +QA
Sbjct: 240 KLLNKTHELKRIRTLSIVGGRNIDQQA 266
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/60 (28%), Positives = 38/60 (63%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + + V G +V NPI+ +++ + + + ++ +GY++PTPIQ Q PI + ++++
Sbjct: 124 FREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGLKLRDMI 183
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Frame = +1
Query: 469 SSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHI--NNQPPIRR-GDGPIALVLAPTRE 639
++ + D K+ +G KTGSGKT+A+ P + + NN R+ G P AL+LAPTRE
Sbjct: 400 AATIPDVLAGKDVLGRGKTGSGKTIAFGAPLVERLMENNGGKDRQMGRKPRALILAPTRE 459
Query: 640 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
LAQQI + + + T + GG P+ +Q
Sbjct: 460 LAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQ 491
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G A+TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ A
Sbjct: 42 RDVLGQARTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAKLT 98
Query: 679 HTSYVRNTCVFGGAPKREQ 735
H + V+GG P R Q
Sbjct: 99 HGQRINVVAVYGGKPLRSQ 117
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 675
++ + A+TG+GKT + LP + H+ + P +G P+ AL+L PTRELA QI + D+
Sbjct: 39 RDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY 98
Query: 676 GHTSYVRNTCVFGG 717
+R+ VFGG
Sbjct: 99 SKYLNIRSLVVFGG 112
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
PD + + V GY+EPTPIQ Q P + G++L+A
Sbjct: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMA 43
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 60.1 bits (139), Expect = 6e-08
Identities = 32/72 (44%), Positives = 46/72 (63%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ I A+TG+GKTL+++LP +V Q P + G PI L LAPTRELA+QI + G
Sbjct: 141 DVIAQARTGTGKTLSFVLP-LVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIG- 198
Query: 682 TSYVRNTCVFGG 717
++ TC++GG
Sbjct: 199 -PHLSTTCIYGG 209
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/101 (34%), Positives = 54/101 (53%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
K+N + T S + + + K+ + A+TG+GKTLA++LP I ++ +P R G
Sbjct: 19 KNNFTEPTPIQSLA-IEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVR 74
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
AL+L PTRELA QI + + +R GG +R Q
Sbjct: 75 ALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQ 115
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + A+TG+GKT A+ LP + + P GP LVL PTREL Q++ DFG
Sbjct: 39 RDLVASAQTGTGKTAAFALPVLARLGGHRP----GGPRVLVLEPTRELGAQVETAFRDFG 94
Query: 679 HTSYVRNTCVFGG 717
+ VR+T + GG
Sbjct: 95 RFTDVRSTIIHGG 107
Score = 42.3 bits (95), Expect = 0.012
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F + P + +GV+ MGY +PTP+Q + P+ ++G++L+A
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVA 43
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 60.1 bits (139), Expect = 6e-08
Identities = 42/108 (38%), Positives = 55/108 (50%)
Frame = +1
Query: 415 LCATRCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIR 594
LCA C D G Q +S + ++ IGVA+TGSGKT AY LP + + Q R
Sbjct: 64 LCAA-CADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLAQ---R 119
Query: 595 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 738
+ LV+ PTRELAQQ+ G + +R + GGA EQA
Sbjct: 120 KTPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQA 167
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+A+TGSGKT A+ +P + Q ALVLAPTRELA QI++ G
Sbjct: 136 KDIVGIAETGSGKTAAFAIPIL-----QTLYTAAQPYYALVLAPTRELAFQIKETFDALG 190
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ +R+ C+ GG EQA
Sbjct: 191 SSMGLRSVCIIGGMSMMEQA 210
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+Q F E + + + ++++ Y +PTPIQA P A+ GK+++
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIV 139
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHIN-------NQPPIRRGDGPIALVLAPTRELAQQIQ 657
++ +GVA+TGSGKTLA++LP + +++ N +R + P+ALVLAPTRELA QI
Sbjct: 223 RDVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVR--NEPLALVLAPTRELALQIT 280
Query: 658 QVAADFGHTSYVRNTCVFGGAPKRE 732
Q A FG + GG +E
Sbjct: 281 QEAEKFGKQLGFNVLSIIGGRQYQE 305
Score = 34.7 bits (76), Expect = 2.4
Identities = 11/60 (18%), Positives = 34/60 (56%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + +T G ++ + + ++E+ + +K+ G+++PTP+Q PI++ ++++
Sbjct: 167 FNEDYGITTKGKKIPHATRSWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVV 226
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELAQQIQQV 663
++ IG+A+TGSGKT+A+ LP + + ++P + R P A++++PTRELA Q
Sbjct: 217 RDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHAA 276
Query: 664 AADFGHTSYVRNTCVFGGAPKREQ 735
+ + C+FGG+ K EQ
Sbjct: 277 LSGLASLVGLSAVCIFGGSDKNEQ 300
Score = 36.7 bits (81), Expect = 0.59
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEVHN--PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
E+E + + E+ + N PI F + + + + Y PTPIQ+ WP ++
Sbjct: 156 EIETFLKEKEIVIKDPSSSNLRPIMNFSQLPQSNLISKN-PFAAYTNPTPIQSASWPFSL 214
Query: 494 SGKNLL 511
SG++++
Sbjct: 215 SGRDVI 220
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = +1
Query: 421 ATRCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHI---NNQPPI 591
A R + G+ + L + K+ IG A+TG+GKTLA+ LP I ++ + +
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSR 71
Query: 592 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 720
RG P A+V+APTRELA+Q+ + + G + V+GGA
Sbjct: 72 ERGRLPRAIVIAPTRELAKQVAEEFSKSG--PQLSTVTVYGGA 112
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 59.7 bits (138), Expect = 7e-08
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ +G A TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ + +
Sbjct: 95 RDLLGQAATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEAIHRY 151
Query: 676 GHTSYVRNTCVFGGAP 723
G R V+GGAP
Sbjct: 152 GRDLGARVLPVYGGAP 167
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E + + + +GY+EPTPIQ + P ++G++LL
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLL 98
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 59.7 bits (138), Expect = 7e-08
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TG+GKT A+ LP + +I+ + +R P ALVL PTRELAQQ+ + +G
Sbjct: 47 RDVVGLAQTGTGKTAAFALPILANIDVK--VR---SPQALVLCPTRELAQQVAEAFRSYG 101
Query: 679 H-TSYVRNTCVFGGAPKREQ 735
+R +FGGA R+Q
Sbjct: 102 RGMGGLRILSIFGGADMRQQ 121
Score = 38.3 bits (85), Expect = 0.19
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F PD++Q+ ++++GY+ TPIQA P+ + G++++
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVV 50
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 59.7 bits (138), Expect = 7e-08
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++F G+A+TGSGKTL + LP + ++ P G ALVL PTRELA QI+Q +G
Sbjct: 99 RDFCGIARTGSGKTLCFALPILQELSQDP-----YGIFALVLTPTRELALQIEQQMNAYG 153
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ ++ + GG EQ+
Sbjct: 154 NPLGIQAQSLIGGKDSVEQS 173
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 59.7 bits (138), Expect = 7e-08
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFG 678
+ IG+A TGSGKT+A+ +PA+ + P DG P LVLAPTREL QQ +V + G
Sbjct: 132 DVIGLAPTGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKVFQNLG 186
Query: 679 HTSYVRNTCVFGGAPKREQA 738
VR +GGAP+ QA
Sbjct: 187 -CGQVRVCEAYGGAPRDLQA 205
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 59.7 bits (138), Expect = 7e-08
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IGV+ TG+GKTL +++P I+ I + PI +GP LV+ P+RELA QI +
Sbjct: 227 RDVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVICPSRELASQISDITK 286
Query: 670 DFGHTSYVRN--------TCVFGGAPKREQ 735
F T Y+ N +CV GG ++Q
Sbjct: 287 YF--TGYIYNYGGPKLYCSCVIGGTDIKDQ 314
Score = 37.9 bits (84), Expect = 0.26
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 323 VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 502
V+ RN + VSG +V PI FE+ P + + + EPT IQ Q P + G+
Sbjct: 168 VDSIRNALLIDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQALPSVLLGR 227
Query: 503 NLL 511
+++
Sbjct: 228 DVI 230
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 59.7 bits (138), Expect = 7e-08
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQQ 660
K+ +G A+TGSGKT A++LP + I I G G P A+++ PTREL QI
Sbjct: 308 KDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYL 367
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQA 738
A F ++ VR V+GG QA
Sbjct: 368 EARKFASSTCVRPVVVYGGTSVGYQA 393
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 350 VTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
V VSG N I F++A+ + V+ V+ Y PTPIQ PI +SGK+L+
Sbjct: 257 VEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLM 311
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 59.7 bits (138), Expect = 7e-08
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHI---NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAA 669
+ IGVA+TGSGKT Y+LP ++ I N R R +GP L+LAPTREL QI Q +
Sbjct: 139 DLIGVAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQIAQQVS 198
Query: 670 DFGHTSYVRNTCVFGGAPKREQA 738
F + + +GG + +QA
Sbjct: 199 LFMKPNNLTVATAYGGQNRDQQA 221
Score = 39.9 bits (89), Expect = 0.064
Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 278 FYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGY 448
++ P + P +V+++ +E+ + ++ P + FP +Q + + +
Sbjct: 61 YFQPQQLASQPMPEKVKDFLKANEIAIKAIDGQPCPYPFLTWGGTQFPPQIQNVIDGLNF 120
Query: 449 KEPTPIQAQGWPIAMSGKNLL 511
+ PTPIQ+ +P+ +SG +L+
Sbjct: 121 RAPTPIQSVVFPLILSGYDLI 141
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 59.7 bits (138), Expect = 7e-08
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKT+A+ +PA+ ++N + P LV++PTRELA Q +
Sbjct: 203 RDVVGIAETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENLNSLI 260
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ ++ V+GGAPK EQA
Sbjct: 261 QGTNLKAVVVYGGAPKSEQA 280
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 496
+ Y KH ++ + + PI F+E + +++G+K YKEPTPIQA WP ++
Sbjct: 144 DRYIKKHNISFADPKSSENLLPILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLA 201
Query: 497 GKNLL 511
G++++
Sbjct: 202 GRDVV 206
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/79 (41%), Positives = 42/79 (53%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +A TGSGKTLAY LP + + P + ALVL PTRELA Q+ +V G
Sbjct: 60 KDVFALANTGSGKTLAYGLPLLERLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVG 113
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ C+ GG K EQ
Sbjct: 114 TALGLNTLCLCGGVDKTEQ 132
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHINNQPPIRRGDGP-----IALVLAPTRELAQQIQQVAADFGH 681
A TGSGKT +++LP I I++ P L+LAPTREL QI++ +F H
Sbjct: 240 ASTGSGKTASFLLPMISRIHHITGKLLPSSPEVRFIYGLILAPTRELCMQIEKQTKEFVH 299
Query: 682 -TSYVRNTCVFGGAP 723
+ +R + GG P
Sbjct: 300 GMTNMRTALLIGGVP 314
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ + AKTGSGKTLA+++PAI + + ++ DG I L++APTRELA QI VA
Sbjct: 66 DILAAAKTGSGKTLAFLIPAIDLLFRKNATKK-DGTIVLIVAPTRELADQIFDVATLLLK 124
Query: 682 TSYVRNTCVFGGAPKREQ 735
+ V +GG K+ +
Sbjct: 125 DTEVSFGAAYGGKEKKNE 142
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 490 YVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVA 666
Y K+ I A+TG+GKT ++ +P I ++ + R RG P LVLAPTRELA Q+ +
Sbjct: 221 YSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDF 280
Query: 667 ADFGHTSYVRNTCVFGGAP 723
+D T + C +GG P
Sbjct: 281 SDI--TKKLSVACFYGGTP 297
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKT A+++P I H+ + AL+L+P RELA Q +V DF
Sbjct: 107 RDVVGMARTGSGKTAAFVIPMIEHLKS---TLANSNTRALILSPNRELALQTVKVVKDFS 163
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R+ + GG EQ
Sbjct: 164 KGTDLRSVAIVGGVSLEEQ 182
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ I +KTGSGKT AY+LP + N +G A+++ PTRELA Q +VA+ G
Sbjct: 34 KDVIIRSKTGSGKTAAYLLPVL----NSVEKLKGKSVKAIIILPTRELALQTHRVASRLG 89
Query: 679 HTSYVRNTCVFGGA 720
S +++T V+GGA
Sbjct: 90 KISGIKSTIVYGGA 103
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ +G+A+TG+GKT A+ LP + H + +P R AL+L+PTRELA QI + A
Sbjct: 42 RDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESIA 98
Query: 670 DFGHTSYVRNTCVFGGAPKREQ 735
D + + + VFGG R Q
Sbjct: 99 DLSEGTPISHCVVFGGVSVRPQ 120
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 675
++ G A+TG+GKT A++L + N P R G P ALVLAPTRELA QIQ+ A
Sbjct: 163 RDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVL 222
Query: 676 GHTSYVRNTCVFGGAPKREQ 735
+ + + VFGG +Q
Sbjct: 223 EIFTGLTSVVVFGGMDHEKQ 242
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 58.8 bits (136), Expect = 1e-07
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT A+++P + + +N+P RR P+ LVLAPTRELA
Sbjct: 305 RDLMSCAQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELAT 364
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
QI + A F + S +R ++GG EQ
Sbjct: 365 QIYEEAKKFSYRSRMRPAVLYGGNNTSEQ 393
Score = 39.5 bits (88), Expect = 0.084
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V +G +V I F++ + ++ +K Y +PTP+Q PI +SG++L++
Sbjct: 255 VEATGQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMS 309
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/79 (44%), Positives = 41/79 (51%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ G A+TGSGKT AY+LP H+ P ALV APTRELA QI V D G
Sbjct: 44 KDICGTAETGSGKTGAYMLPIFHHMWENP-----HSFFALVFAPTRELATQIDHVTRDIG 98
Query: 679 HTSYVRNTCVFGGAPKREQ 735
VR + GG + Q
Sbjct: 99 KDIKVRVCTIIGGVDEDSQ 117
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA+Q +V
Sbjct: 184 RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVE 243
Query: 670 DF 675
F
Sbjct: 244 QF 245
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/77 (29%), Positives = 44/77 (57%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
+ P + K S + + R + + V+G ++ PI+ F++ FP V +K G +PT
Sbjct: 111 WKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPT 170
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ QG P+ ++G++++
Sbjct: 171 PIQVQGLPVILAGRDMI 187
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 58.8 bits (136), Expect = 1e-07
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 13/92 (14%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRE 639
++ + A+TGSGKT A++LP + I + P RR PI+LVLAPTRE
Sbjct: 218 RDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277
Query: 640 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
LA QI + A F + S VR V+GGA +Q
Sbjct: 278 LAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 309
>UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 767
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Frame = +1
Query: 499 KEFIGV-AKTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
KE I + ++TGSGKTL Y++P I VH+ I R DG V+ PTREL Q ++VA
Sbjct: 246 KENIALKSETGSGKTLTYLVPIISNLVHMGTDQKITREDGSYVFVICPTRELCIQCEEVA 305
Query: 667 ADFGHTS-YVRNTCVFGGA-PKREQA 738
S Y+ C+ GG PK+E+A
Sbjct: 306 QLVTKKSKYLITGCLMGGENPKKEKA 331
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+A+TG+GKT A+ LP + N+ +R P LVLAPTRELAQQ+ +
Sbjct: 44 KDVLGLAQTGTGKTAAFTLPLLARTQNE--VRE---PQVLVLAPTRELAQQVAMAVESYS 98
Query: 679 -HTSYVRNTCVFGGA 720
H S V+ ++GG+
Sbjct: 99 KHESNVKVASIYGGS 113
Score = 33.1 bits (72), Expect = 7.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F P + + ++ GY++P+PIQ Q P + GK++L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVL 47
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHN----PIQYFEEANFPDYVQQGVKTMGYKE 454
P PT LKR + E++R +H++++ P F++A FP +++ +K GY
Sbjct: 51 PTPT-LKRVASK-EDFRKEHQISIKNACERTRDLEPYVTFDDAKFPAALRKALKAQGYDA 108
Query: 455 PTPIQAQGWPIAMSGKNLLA 514
PTPIQA+ WPI + GK+++A
Sbjct: 109 PTPIQAEAWPILLKGKDVVA 128
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLAPTRE 639
K+ + +AKTGSGKT ++LPA+ I P ++ DG P +VLAPTRE
Sbjct: 124 KDVVAIAKTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRE 183
Query: 640 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
LA QI A F + R+ ++GGA K +Q
Sbjct: 184 LAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQ 215
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG A TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q
Sbjct: 139 RDIIGCAVTGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELAYQTHIECQKIF 197
Query: 679 HTSYVRNTCVFGG 717
++ C+ GG
Sbjct: 198 SLMDKKSACLVGG 210
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNK-HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P KN Y P + +S ++E+ R + + V G+ V PI + + P + ++
Sbjct: 59 PIRKNIYIPSSEISSKSQTDIEDLRKRLGNIVVHGLNVLCPIVNWTDCGLPAPLMSHLRL 118
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
G+K+PT IQ Q P +SG++++
Sbjct: 119 RGFKQPTSIQCQAIPCILSGRDII 142
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAAD 672
++ G A+TG+GKTLA+++ + + ++P + R + P AL+LAPTRELA QI A
Sbjct: 47 RDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVK 106
Query: 673 FGHTSYVRNTCVFGGAPKREQ 735
FG +R ++GG +Q
Sbjct: 107 FGGNLGLRFALIYGGVDYDKQ 127
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/81 (41%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
++ IG A+TG+GKTLA+ +P I I RG P+ LVLAPTRELA+Q+++ +F
Sbjct: 142 RDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEK---EF 198
Query: 676 GHTSYVRNT-CVFGGAPKREQ 735
++ +T C++GG P +Q
Sbjct: 199 RESAPSLDTICLYGGTPIGQQ 219
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G AKTGSGKTLA+++P + + + DG AL+++PTRELA QI +V G
Sbjct: 91 RDILGAAKTGSGKTLAFLVPVLEKLYHAKWTEY-DGLGALIISPTRELAVQIFEVLRKIG 149
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ V GG +E+A
Sbjct: 150 RNHFFSAGLVIGGKSLKEEA 169
>UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:
RNA helicase II/Gu - Xenopus laevis (African clawed
frog)
Length = 800
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 YVWKEFIGVAKTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
Y K+ + A+TG+GKT ++ +P + ++ +Q P+ RG P ++L PTRELA QI
Sbjct: 256 YSGKDVVVQARTGTGKTFSFGIPLVERLSEDQQPLARGRAPRVIILTPTRELAIQITNEL 315
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
T ++ C +GG P ++Q
Sbjct: 316 RSM--TKKLKVACFYGGTPYQQQ 336
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFGHTSYV 693
A TG+GKTLA++LPA+ H+ + P R+ GP LVLAPTRELA+QI + A F + +
Sbjct: 47 APTGTGKTLAFLLPALQHLLDFP--RQQPGPARILVLAPTRELAEQIHEQAKQFEAKTGL 104
Query: 694 RNTCVFGG 717
+ V GG
Sbjct: 105 TSVVVTGG 112
>UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Arthrobacter sp. (strain FB24)
Length = 635
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 478 LADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPP--IRRGDGPIALVLAPTRELAQQ 651
L D+ ++ +G +TGSGKT+A+ +P + + + R+ P+ LVLAPTRELA Q
Sbjct: 33 LPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAEREAKHFRKPGRPMGLVLAPTRELATQ 92
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQ 735
I + T ++GG + Q
Sbjct: 93 INATIEPMAKAMGLNTTVIYGGISQARQ 120
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 649 QIQQVAADFGHTSYVRNTCVFGG 717
QI + A F + S ++ ++GG
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGG 259
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 506 LLA 514
L++
Sbjct: 179 LMS 181
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 478 LADSYVWKEFIGVAKTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQ 651
L S ++ IG A+TGSGKTLAY++P + +I +N I DG ++L+L PTRELA Q
Sbjct: 102 LPHSLQGRDIIGQARTGSGKTLAYVIPILENIYRDNYCSI---DGLLSLILTPTRELASQ 158
Query: 652 IQQVAADFG-HTSYVRNTCVFGG 717
+ V + G S + C+ GG
Sbjct: 159 VFDVIKEIGKFHSTLSAGCIVGG 181
>UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Aspergillus terreus (strain NIH 2624)
Length = 729
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G AKTGSGKTLA+++P + ++ + DG AL+L+PTRELA QI +V G
Sbjct: 84 RDILGAAKTGSGKTLAFLIPVLENLYRKQWAEH-DGLGALILSPTRELAIQIFEVLRKVG 142
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ V GG +E+
Sbjct: 143 RYHHFSAGLVIGGKSLKEE 161
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINN---QP-PIRRGDGPIALVLAPTRELAQQIQQ-- 660
++ +G+A TGSGKTLA+++P ++ + +P ++ +GP AL+LAPTRELAQQIQ
Sbjct: 227 RDLMGIASTGSGKTLAFVIPILIKLLGTAIRPLSLKVIEGPKALILAPTRELAQQIQAEI 286
Query: 661 ---VAADFGHTSYVRNTCVFGG 717
++ + + + C+ GG
Sbjct: 287 KKILSLSSNELTKITSICIVGG 308
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQV 663
++ + A+TGSGKT A+ P I I I R G P+A++L+PTRELA QI
Sbjct: 184 RDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDE 243
Query: 664 AADFGHTSYVRNTCVFGGAPKREQ 735
A F + + V+ +GG P +Q
Sbjct: 244 ARKFSYQTGVKVVVAYGGTPVNQQ 267
Score = 37.9 bits (84), Expect = 0.26
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 PF-NKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
PF N DP + + E Y + + SG V P+ F E + + + ++
Sbjct: 105 PFGNDGNADPAVNEQENTVINFEAYEDI-PIETSGDNVPPPVNTFAEIDLGEALNLNIQR 163
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA 514
Y +PTP+Q PI +G++L+A
Sbjct: 164 CKYVKPTPVQRNAIPILAAGRDLMA 188
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 675
++ +G+A+TG+GKT AY LP + + PP G + AL+L+PTR+LA QI F
Sbjct: 51 RDVVGLAQTGTGKTAAYALPLLQQLTEGPP-----GQLRALILSPTRDLADQICVAMNHF 105
Query: 676 GHTSYVRNTCVFGG 717
G +++R ++GG
Sbjct: 106 GRQTHLRCATIYGG 119
Score = 36.7 bits (81), Expect = 0.59
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E NF + G++T GY+ TPIQ + P + G++++
Sbjct: 15 FTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVV 54
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQIQQVA 666
++ + A+TGSGKT A++LP + +I NN P P LV+ PTRELA QI + A
Sbjct: 299 RDIMACAQTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREA 358
Query: 667 ADFGHTSYVRNTCVFGGA 720
F H+S + +GGA
Sbjct: 359 RKFSHSSVAKCCVAYGGA 376
Score = 33.1 bits (72), Expect = 7.3
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 356 VSGVEVHNPI-QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
VSG E P + F+ N + + + GY PTP+Q P M+G++++A
Sbjct: 250 VSGAEPIQPAAESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMA 303
>UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicase,
putative; n=4; Plasmodium|Rep: DEAD/DEAH box
ATP-dependent RNA helicase, putative - Plasmodium vivax
Length = 599
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G AKTGSGKTLA+++P+I + N + + +G L+++PTREL QI QV D
Sbjct: 184 KDILGAAKTGSGKTLAFLVPSINILYNIKFLPK-NGTGVLIISPTRELCLQIYQVCKDLC 242
Query: 679 HTSYVRNTCVFGGAPKREQ 735
N + GG + E+
Sbjct: 243 KYIPQTNGIIIGGMSRNEE 261
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/79 (40%), Positives = 44/79 (55%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I ++TGSGKT A++LP I + P + L PTRELA QI + F
Sbjct: 159 EDLIVTSQTGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEETRKFC 215
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ ++ TCVFGGAP EQ
Sbjct: 216 KGTDLKTTCVFGGAPITEQ 234
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 654
+ +A+TGSGKTLAY+LPA+VH+ I P L+L PTREL QI
Sbjct: 100 LAIAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQI 148
Score = 33.5 bits (73), Expect = 5.5
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTV--SGVEVHNPIQYFEE-ANFPDYVQQGVK 436
F K F D + L+ S ++E++R + +T+ G + ++ IQ F + +FP +
Sbjct: 24 FTKCFIDA--SNLQYSQEDIEKFRTDNNITIVRDGEQDNDIIQPFLDWKHFP------LG 75
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
+++PT IQ++ PI +SG+N LA
Sbjct: 76 PPEFQQPTAIQSEVIPIVLSGRNALA 101
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/92 (33%), Positives = 49/92 (53%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G R A + + + +G A TG+GKT A++LPA+ H+ + P R+ P LV
Sbjct: 23 GYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPR-RKPGPPRILV 81
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 717
L PTRELA Q+ + A + +++ + GG
Sbjct: 82 LTPTRELAMQVAEQAEELAQFTHLNIATITGG 113
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +2
Query: 272 KNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYK 451
K + P T+L + E R K +TV G +V P++ F+E F + G++ G
Sbjct: 141 KTSWRPPRTILTKDNVRHERIRRKFGITVEGEDVPPPLRSFKEMKFHKGILLGLEQKGIT 200
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
+PTPIQ QG P +SG++++
Sbjct: 201 KPTPIQVQGIPAVLSGRDII 220
Score = 56.0 bits (129), Expect = 9e-07
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q +
Sbjct: 217 RDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQ 276
Query: 670 DF------GHTSYVRNTCVFGGAPKRE 732
+ H +R GG P E
Sbjct: 277 HYTNSLRHHHCPEIRCCLAIGGVPVSE 303
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + A+TG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ +
Sbjct: 45 KDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQYA 101
Query: 679 HTSYVRNTCVFGG 717
+ +R CV+GG
Sbjct: 102 EHTDLRIVCVYGG 114
>UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio
bacteriovorus|Rep: RNA helicase - Bdellovibrio
bacteriovorus
Length = 460
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
+GV++TGSGKTLAY+LP + ++ + P++ + P A+V+ P+REL +Q+ +V
Sbjct: 95 VGVSETGSGKTLAYVLPILNYLKSLEESGDPVKEENAPRAVVMVPSRELGEQVAKVFKSM 154
Query: 676 GHTSYVRNTCVFGG 717
H + +R GG
Sbjct: 155 THDTRLRVRPALGG 168
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TG+GKT ++ LP + + P +G LVLAPTREL QI F
Sbjct: 45 RDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFS 104
Query: 679 HTSYVRNTCVFGGAPKREQ 735
VR T +FGG + Q
Sbjct: 105 RHQPVRVTTIFGGVSQVHQ 123
Score = 33.9 bits (74), Expect = 4.2
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 386 QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
Q F + + + + GY +PTPIQAQ P+ + G++LL
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLL 48
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELAQQIQ 657
++ + A+TGSGKT A+++P + + P + + P+AL+LAPTRELA QI
Sbjct: 249 RDLMACAQTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIY 308
Query: 658 QVAADFGHTSYVRNTCVFGGAPKREQ 735
A F + S VR V+GG R Q
Sbjct: 309 DEARKFSYRSLVRPCVVYGGRDIRGQ 334
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKTL + LP I+ Q P +R +GP +++ P+RELA+Q +V
Sbjct: 85 RDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVIT 144
Query: 670 DF-------GHTSYVRNTCVFGGAPKREQA 738
F G S N C+ GG+ +EQ+
Sbjct: 145 HFSRALEAHGFPSLRTNLCI-GGSSIKEQS 173
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
+ P +L ++E R K + V G ++ P++ F+E FP + +K G PT
Sbjct: 12 WTPPRYILHMPKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPT 71
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ QG P ++G++++
Sbjct: 72 PIQVQGLPAVLTGRDMI 88
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQ 651
+ +G A+TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL Q
Sbjct: 133 DILGSAETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQ 192
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQ 735
I VA +++R+ V GG R Q
Sbjct: 193 ITSVAKTLLKLTHLRSVSVIGGVDARSQ 220
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIR--------RGDGPIALVLAPTRELAQQI 654
++ I VAKTGSGKTLA++LP + HI ++ + P+ +++ PTREL QI
Sbjct: 416 RDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQI 475
Query: 655 QQVAADFGHTSYVRNTCVFGGAPKREQ 735
+ F + C +GG+P ++Q
Sbjct: 476 YRDLRPFLAALELTAVCAYGGSPIKDQ 502
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+ F + FY + + E E R + + + G + PI + + P +
Sbjct: 335 EDFRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWTQLGLPGPTMGVLN 394
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
+ Y +PT IQAQ P MSG+++++
Sbjct: 395 DLRYDKPTSIQAQAIPAVMSGRDVIS 420
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 57.2 bits (132), Expect = 4e-07
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q ++
Sbjct: 215 RDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQ 274
Query: 670 DFG-HTS-----YVRNTCVFGGAPKRE 732
+ H +R+ GG P E
Sbjct: 275 HYSKHLQACGMPEIRSCLAMGGLPVSE 301
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
QP K + P + + S E E R++ + V G PI+ F E FP + G+
Sbjct: 136 QPI-KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAA 194
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
G K PTPIQ QG P ++G++L+
Sbjct: 195 KGIKNPTPIQVQGLPTVLAGRDLI 218
>UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;
n=2; Euteleostomi|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 645
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 YVWKEFIGVAKTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
Y K+ IG A+TG+GKT ++ +P + + + RRG P LVLAPTRELA Q+ +
Sbjct: 189 YDGKDLIGQARTGTGKTFSFAVPLVEKLQSGDQERRRGRPPKVLVLAPTRELAIQVTKDF 248
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
D T + TC +GG+ Q
Sbjct: 249 KDI--TRKLSVTCFYGGSSYNPQ 269
>UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 624
Score = 56.8 bits (131), Expect = 5e-07
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG A+TGSGKTLA+++P ++ + DG A++L+PTRELAQQI V A
Sbjct: 127 RDIIGAARTGSGKTLAFLIP-LIEFMYRSRWTELDGLCAIILSPTRELAQQIFDVFASIA 185
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ + GG +E+A
Sbjct: 186 GERFTA-ALITGGKDTKEEA 204
>UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n=1;
Deinococcus radiodurans|Rep: ATP-dependent RNA helicase,
putative - Deinococcus radiodurans
Length = 478
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I A+TGSGKTLA+++PA RG P L+++PTRELA QI+ VA + G
Sbjct: 65 RDVIATARTGSGKTLAFLIPAAARGIGVTGKTRGMAPEVLIVSPTRELAVQIRDVARELG 124
Query: 679 HTS 687
T+
Sbjct: 125 MTA 127
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+A+TGSGKT +++LP I+ + P+ + ALVL PTRELA Q+ QV F
Sbjct: 47 KDILGIAQTGSGKTASFVLP-ILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFS 105
Query: 679 HT--SYVRNTCVFGG 717
+ + +++ V+GG
Sbjct: 106 NALPNKIKSLAVYGG 120
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 56.8 bits (131), Expect = 5e-07
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
+ +G+A+TG+GKT A++LP + I N P R ALVLAPTRELA QI A +
Sbjct: 96 DLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAARTY 153
Query: 676 GHTSYVRNTCVFGGAPKREQA 738
G + V GGA QA
Sbjct: 154 GKFTRPSVAVVIGGAKPGPQA 174
>UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_80478_82724 - Giardia lamblia
ATCC 50803
Length = 748
Score = 56.8 bits (131), Expect = 5e-07
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQI 654
++ IG+A+TGSGKT A+ +PA++H QPP PI +V AP RELA QI
Sbjct: 287 RDCIGIAETGSGKTHAFSIPALLHAAAQPPTSEAVPSPIVVVFAPARELASQI 339
>UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n=2;
Trypanosoma cruzi|Rep: ATP-dependent RNA helicase,
putative - Trypanosoma cruzi
Length = 886
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD------GPIALVLAPTRELAQQIQQV 663
+ +GVA+TGSGKT AY++P I + P G+ GP+ALV+ PTRELA+Q+ +
Sbjct: 257 DVLGVAETGSGKTAAYLIPLFADILRRTPRLLGNEALISHGPLALVMVPTRELAEQVTRE 316
Query: 664 AADFGH 681
A + H
Sbjct: 317 AIEIIH 322
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 56.8 bits (131), Expect = 5e-07
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAI--VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 672
++ +G AKTGSGKTLA+++PAI +H P R G G +V+ PTRELA QI VA +
Sbjct: 80 RDVLGAAKTGSGKTLAFLIPAIELLHSLKFKP-RNGTG--IIVITPTRELALQIFGVARE 136
Query: 673 FGHTSYVRNTCVFGGAPKREQA 738
V GGA +R++A
Sbjct: 137 LMEFHSQTFGIVIGGANRRQEA 158
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 654
K+ I +KTGSGKT A+++PAI + Q + R D P AL+LAPTRELA+Q+
Sbjct: 39 KDIIASSKTGSGKTFAFLVPAINRLMAQKALSRQD-PRALILAPTRELAKQV 89
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 675
K I A+TG+GKT A+ LP I + ++ +G+ I ALV+ PTRELA QI + +
Sbjct: 39 KNVIVAAQTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSY 98
Query: 676 GHTSYVRNTCVFGGAPKREQ 735
S +R+T VFGG Q
Sbjct: 99 SKYSNLRSTAVFGGVSLEPQ 118
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 56.4 bits (130), Expect = 7e-07
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
++ + A+TGSGKT A+++P I H+ NQ + P L+LAPTRELA QI +
Sbjct: 222 RDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSES 281
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
F + +R+ V+GGA Q
Sbjct: 282 QKFSLNTPLRSCVVYGGADTHSQ 304
>UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP7 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 742
Score = 56.4 bits (130), Expect = 7e-07
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFG 678
+F A+TGSGKTL+Y+LP I I N + R G ALV+APTRELA QI V +
Sbjct: 186 DFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVIAPTRELASQIYHVCSTLV 245
Query: 679 HTSYVRNTC-VFGGAPKREQ 735
+ C + GG K+ +
Sbjct: 246 SCCHYLVPCLLIGGERKKSE 265
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 672
++ +G+A+TGSGKTLAY++P + + G GP AL+L P+RELA QI V D
Sbjct: 67 RDILGMARTGSGKTLAYLIPLLQRTGS---THHGQGPRALILCPSRELAVQIYTVGKD 121
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 56.4 bits (130), Expect = 7e-07
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT A+++P + + + PP RR P+ LVLAPTRELA
Sbjct: 333 RDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELAT 392
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
QI + A F + S +R ++GG EQ
Sbjct: 393 QIFEEAKKFAYRSRMRPAVLYGGNNTSEQ 421
Score = 36.7 bits (81), Expect = 0.59
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V +G V I F++ + ++ V Y +PTP+Q PI ++G++L+A
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMA 337
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + ++TG+GKTLA+ P I IN PP ++ + LVL PTRELA Q+++ ++
Sbjct: 39 KDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYA 98
Query: 679 HTSY--VRNTCVFGG 717
S ++ + GG
Sbjct: 99 EFSLRPIKTATLIGG 113
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
FE+ NFPDY+ + V + + E T IQA+ P+ GK+LLA
Sbjct: 3 FEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLA 43
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+A+TG+GKT A++L + ++ P + GP A+VLAPTRELA QI++ G
Sbjct: 48 DVMGIAQTGTGKTAAFLLSLMHYLMTNPVHPKAKGPWAIVLAPTRELAIQIKKEMDLLGA 107
Query: 682 TSYVRNTCVFGGAPKREQ 735
+ + + ++GG Q
Sbjct: 108 YTGLVSLAIYGGTSIEHQ 125
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 56.0 bits (129), Expect = 9e-07
Identities = 31/78 (39%), Positives = 42/78 (53%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG A+TG+GKT A+ LP + ++ P LVL+PTRELA QI Q +G
Sbjct: 35 DLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGR 94
Query: 682 TSYVRNTCVFGGAPKREQ 735
R T +FGG + Q
Sbjct: 95 NVKFRLTTIFGGVGQNPQ 112
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 56.0 bits (129), Expect = 9e-07
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 654
++ IG+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 41.1 bits (92), Expect = 0.028
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 463
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 464 IQAQGWPIAMSGKNLL 511
IQ QG P+A+SG++++
Sbjct: 216 IQIQGIPVALSGRDMI 231
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + A+TGSGKT A++LP + + P P ++++PTRELA QI A F
Sbjct: 283 RDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA 342
Query: 679 HTSYVRNTCVFGGAPKREQ 735
SY++ V+GG R Q
Sbjct: 343 FESYLKIGIVYGGTSFRHQ 361
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/59 (42%), Positives = 34/59 (57%)
Frame = +2
Query: 338 NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
N V V+G +V PIQ+F A+ D + V GYK PTPIQ P+ SG++L+A
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMA 287
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 56.0 bits (129), Expect = 9e-07
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +1
Query: 430 CKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHI-NNQPPIRRGDG 606
C + G + + ++ ++ IG+A+TGSGKT A+ +P + + +N P
Sbjct: 119 CTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPF----- 173
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 738
A VLAPTRELA QI Q G T VR+ + GG Q+
Sbjct: 174 -FACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQS 216
Score = 35.9 bits (79), Expect = 1.0
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +2
Query: 284 DPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTP 463
D P+ K SP EE K T++ + +++ + P V+ MG+K PTP
Sbjct: 73 DDDPSADKDSPAADEEQDEKKVATIA--DDGKKVEFSDLGVIPQIVE-ACTNMGFKHPTP 129
Query: 464 IQAQGWPIAMSGKNLL 511
IQ + P A+ ++++
Sbjct: 130 IQVKAIPEALQARDVI 145
>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7;
n=9; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 671
Score = 56.0 bits (129), Expect = 9e-07
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +1
Query: 427 RCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRR--- 597
+ K NG++ +S + +G A+TG GKTLA++LP + + N P +
Sbjct: 110 KLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKM 169
Query: 598 --GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 717
G P LVL PTRELA+Q+ +G + + + C++GG
Sbjct: 170 GYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGG 211
>UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP7 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 948
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 687
A+TGSGKTL+Y+LP + + ++ I R G +A++LAPTRELAQQI +V H S
Sbjct: 263 AQTGSGKTLSYLLPIVQTLLPLSRLSYIDRSIGTLAIILAPTRELAQQISKVLEQLLHMS 322
Query: 688 Y 690
+
Sbjct: 323 F 323
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +A+TG+GKT A+++P + + N D LV+APTRELA QI +V G
Sbjct: 39 EDVLAIAQTGTGKTAAFVIPVLNTLINVKKSEHTDIS-CLVMAPTRELAVQISEVFKKIG 97
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R C+ GG + Q
Sbjct: 98 AYTRLRTVCITGGVEQEAQ 116
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI-AL 618
G ++ + + ++ +G A+TG+GKT A+ P + + P R PI +L
Sbjct: 20 GYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGR---PIRSL 76
Query: 619 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
+L PTRELA QIQ+ +G +R+ +FGG ++ Q
Sbjct: 77 ILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQ 115
Score = 32.7 bits (71), Expect = 9.7
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E + + + +GY++P+PIQ + P A++G+++L
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVL 42
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TG+GKT A++LP + + P RG A+++ PTRELA+QIQ V G
Sbjct: 39 RDVIGIAQTGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEALG 94
Query: 679 HTSYVRNTCVFGG 717
+ +R+ ++GG
Sbjct: 95 KYTGLRSVTLYGG 107
Score = 36.3 bits (80), Expect = 0.78
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F+ F + G++ +GY PTPIQ Q P A+ G++++
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVI 42
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA
Sbjct: 239 RDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAI 298
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
Q + + F + +R ++GG+ R Q
Sbjct: 299 QTYEESRKFCFGTGIRTNVLYGGSEVRSQ 327
Score = 32.7 bits (71), Expect = 9.7
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
E+T S P+Q F E + + ++ + Y+ PTP+Q P ++G++L+A
Sbjct: 187 EMTGSDTNKIKPMQSFMELEGIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMA 243
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+V VSG V PI+ FE A + V +K GYK+PTP+Q PI M+G++L+A
Sbjct: 183 QVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMA 238
Score = 38.3 bits (85), Expect = 0.19
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQVA 666
++ + A+TGSGKT A+ +P I + + P ++++PTREL QI Q
Sbjct: 234 RDLMACAQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQI 293
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
F S ++ +GG Q
Sbjct: 294 VKFSLNSILKTVVAYGGTSVMHQ 316
>UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 536
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 484 DSYVWKEFIGVAKTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQ 651
DSY + IG+++ G+GKTLAY++P + +I N P P+++VL PT ELA Q
Sbjct: 176 DSY---DIIGLSQPGTGKTLAYVIPLLYYILEYKKNHPETNNFSIPLSVVLVPTHELAVQ 232
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQA 738
+Q+V G +++ + G +QA
Sbjct: 233 VQEVIDKLGINLGIKSRTLTGSFRLNDQA 261
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 YVWKEFIGVAKTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
Y K+ I A+TG+GKT ++ +P I + NQ I++ P LVLAPT ELA Q+ +
Sbjct: 172 YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTGELANQVAKDF 231
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
D T + C +GG + Q
Sbjct: 232 KDI--TRKLSVACFYGGTSYQSQ 252
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
+KTGSGKT AY++P I + + IR AL+L PTRELA Q+ +V+ G S +R
Sbjct: 46 SKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELAVQVAKVSEALGKRSGIR 99
Query: 697 NTCVFGGAPKREQ 735
V+GG +Q
Sbjct: 100 TVVVYGGVSINKQ 112
Score = 37.9 bits (84), Expect = 0.26
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
FEE N + + + ++ GY EPT +Q+ PIA++G +L+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLV 43
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ IG+A+TGSGKT +++LP + H+ N RG +++ PTRELA Q+ +V + G
Sbjct: 47 KDIIGIAQTGSGKTASFLLPMVQHLLNVKEKNRGF--YCIIIEPTRELAAQVVEVIDEMG 104
Query: 679 HTSYVRNTCVFGG 717
+C+ G
Sbjct: 105 KALPGLTSCLLVG 117
>UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41;
n=5; Euteleostomi|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 306
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E R K+ + V G + PI+ F E FP + +G+K G PTPIQ QG P +SG++
Sbjct: 152 ERARKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRD 211
Query: 506 LL 511
++
Sbjct: 212 MI 213
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQ 651
++ IG+A TGSGKTL + LP I+ Q P + +GP L++ P+RELA+Q
Sbjct: 210 RDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSRELARQ 263
>UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-dependent RNA helicase -
Sulfurovum sp. (strain NBC37-1)
Length = 447
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
I A+TGSGKTLAY+LPA+ IN + P +L+PT+ELAQQI +V+ F
Sbjct: 42 IASAQTGSGKTLAYLLPALQQINPEAEKVTHHYPRLFILSPTKELAQQIYEVSRPF 97
>UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=1;
Limnobacter sp. MED105|Rep: Putative ATP-dependent RNA
helicase - Limnobacter sp. MED105
Length = 617
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF-GHTS 687
++TGSGKT ++LP + + Q P+ GP LVL PTRELAQQ+ Q A + T
Sbjct: 45 SQTGSGKTFGFLLPVMHRMMTGEQSPMEMLAGPECLVLCPTRELAQQVSQDAINLVKFTK 104
Query: 688 YVRNTCVFGGAPKREQ 735
VR V GG P +Q
Sbjct: 105 GVRVATVVGGMPYGKQ 120
>UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1;
Bigelowiella natans|Rep: ATP-dependent RNA helicase -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 507
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +AKTGSGKTL Y++P IV +N +R +V+APTREL QI + +
Sbjct: 172 KDIFCLAKTGSGKTLCYLIPLIVGLNRLKNVRN------IVIAPTRELVLQIGRESYYLT 225
Query: 679 HTSYVRNTCVFGGA 720
S +R C +GG+
Sbjct: 226 KHSNIRTFCFYGGS 239
>UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_151, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 635
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHINNQPPIR----RGDGPIALVLAPTRELAQQIQQVAADFGHTSY 690
TGSGKTLAY+LP + + + + P A+VL PTREL++Q+ +VA H +
Sbjct: 165 TGSGKTLAYMLPLVQLLRRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHAR 224
Query: 691 VRNTCVFGGAPKREQ 735
R+T V GG R Q
Sbjct: 225 FRSTMVSGGGRLRPQ 239
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAA 669
++ + A+TGSGKT A+ P I I R G P AL+L+PTREL+ QI + A
Sbjct: 158 RDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAK 217
Query: 670 DFGHTSYVRNTCVFGGAPKREQ 735
F + + ++ +GGAP +Q
Sbjct: 218 KFSYKTGLKVVVAYGGAPISQQ 239
Score = 36.7 bits (81), Expect = 0.59
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
E+EE + + + + I + + + + Q ++ Y +PTPIQ PIAM+G
Sbjct: 98 ELEEVEDTNGGLSINFDAYEDIPVEAKIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAG 157
Query: 500 KNLLA 514
++L+A
Sbjct: 158 RDLMA 162
>UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG8611-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 975
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADF 675
K+ + ++TGSGKTLAY LP + + Q P I+R DG +ALV+ PTREL Q ++
Sbjct: 366 KDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKL 425
Query: 676 --GHTSYVRNTCVFGGAPKREQA 738
+T V + + G + K E+A
Sbjct: 426 VKPYTWIVPGSLLGGESRKSEKA 448
>UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 744
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQ---PPIRRGDGPIALVLAPTRELAQQIQQVAA 669
K+ IG +TGSGKTL + LP I + N+ I++ P LV+ PTREL Q+
Sbjct: 106 KDLIGKDRTGSGKTLGFSLPLIEKLRNEGNFTSIKKKQTPYMLVVVPTRELCIQVANEIN 165
Query: 670 DFGHT-SYVRNTCVFGGAPKREQA 738
HT + R ++GG REQA
Sbjct: 166 TLKHTDNEFRVLQIYGGVDVREQA 189
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 55.2 bits (127), Expect = 2e-06
Identities = 36/94 (38%), Positives = 53/94 (56%)
Frame = +1
Query: 454 TDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPT 633
TD + S L+ S K+ +G A+TGSGKTLA+++P ++ I + DG ALV++PT
Sbjct: 82 TDIQAKS-LSLSLKGKDVLGAARTGSGKTLAFLIP-VLEILYRRKWGPSDGLGALVISPT 139
Query: 634 RELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
RELA QI +V G V GG +++
Sbjct: 140 RELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQE 173
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT ++ P + P R P ALVLAPTRELA
Sbjct: 192 RDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELAT 251
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAP 723
QI + A F + S+VR V+GGAP
Sbjct: 252 QIFEEARKFTYRSWVRPCVVYGGAP 276
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V SG +V PI F + + + +K + +PTP+Q PI G++L+A
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMA 196
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
EV SG +V PI F+EAN + +K GY +PTP+Q G PI +SG++L+A
Sbjct: 289 EVKTSGEDVPPPISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMA 344
Score = 43.2 bits (97), Expect = 0.007
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVH--------INNQPPIRRGDGPIALVLAPTRELAQQI 654
++ + A+TGSGKT A+++P I+H +++ + + P AL+++PTREL QI
Sbjct: 340 RDLMACAQTGSGKTAAFLIP-IIHTLLAKDRDLSDMSSANQVE-PRALIISPTRELTIQI 397
Query: 655 QQVAADFGHTSYVRNTCVFGGAPKREQ 735
A F S ++ ++GG Q
Sbjct: 398 FDEARKFSKDSVLKCHIIYGGTSTSHQ 424
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAAD- 672
K+ G+A+TG+GKT+A+++P I +I + +G G ALVLAPTREL QI + A
Sbjct: 39 KDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAKKL 93
Query: 673 FGHTSYVRNTCVFGGAPKREQ 735
H+ +R+ + GG + Q
Sbjct: 94 LKHSEGIRSVPIIGGTDYKSQ 114
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Frame = +1
Query: 478 LADSYVWKEFIGVAKTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQI 654
L + ++ + A+TGSGKTLAY L + + R P+AL++APTRELA Q+
Sbjct: 30 LTEEAAGRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALIVAPTRELALQV 89
Query: 655 Q-QVAADFGHTSYVRNTCVFGGAPKREQ 735
Q ++A + H +CV G P+REQ
Sbjct: 90 QRELAWLYEHADGRVVSCVGGMDPRREQ 117
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 672
++ +G+A+TG+GKT A+ LP + + + +P RRG LVL+PTRELA QI + D
Sbjct: 103 RDLLGIAQTGTGKTAAFALPILHRLAEDKKPAPRRGFR--CLVLSPTRELATQIAESFRD 160
Query: 673 FGHTSYVRNTCVFGG 717
+G + +FGG
Sbjct: 161 YGKHMGLTVATIFGG 175
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 335 RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
R H + + + + F + + + + GY PTPIQAQ P+ MSG++LL
Sbjct: 48 RGSHAPSRAAARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLL 106
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +1
Query: 511 GVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 690
G+A TG+GKTLA++LP + I+ ++R L+LAP++ELA Q QVA ++G+
Sbjct: 35 GLAPTGTGKTLAFVLPVLSRIDTN--LKRTQ---VLILAPSQELAMQTTQVAREWGNAVG 89
Query: 691 VRNTCVFGGAPKREQA 738
+ GGA R QA
Sbjct: 90 ASVASLIGGANGRRQA 105
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAI---VHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQV 663
++ + A+TGSGKT A+++P + + ++ + P+ALV+APTRELA QIQ+
Sbjct: 391 RDLMSCAQTGSGKTAAFLIPVLNTLMQFRSELTSSLSEVQAPLALVIAPTRELAVQIQKE 450
Query: 664 AADFGHTSYVRNTCVFGG 717
A F + ++ ++GG
Sbjct: 451 ARKFAQNTSIKPVVIYGG 468
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 347 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
EVT G+ + + I+ F EAN + + V+ Y +PTP+Q PI ++L++
Sbjct: 341 EVTGPGI-IPSAIREFAEANIDRTILENVEKAHYIKPTPVQKYAIPIITGNRDLMS 395
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A TGSGKT+A+ +PA+ P P +VLAPTREL QQ +V
Sbjct: 157 DMIGLAPTGSGKTVAFAVPALKKFQWSP----NGSPRIVVLAPTRELVQQTAKVFHQLS- 211
Query: 682 TSYVRNTCVFGGAPKREQA 738
+ VR +GGAP+ QA
Sbjct: 212 SGKVRVCEAYGGAPREAQA 230
Score = 35.9 bits (79), Expect = 1.0
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 377 NPIQYFEEA-NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
NP++ F + N PD++ +G+++ G+ TPIQ+ P+ G +++
Sbjct: 114 NPVKLFSDLDNLPDWLSKGLQSSGFSCTTPIQSYTIPVLDEGHDMI 159
>UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_54,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 696
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAI--VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 672
++ +G +KTGSGKTL+Y+LP I +++N P+ DG AL++ PTRELA Q+ +V
Sbjct: 94 RDILGASKTGSGKTLSYLLPLIENLYVNKWTPL---DGLGALIILPTRELAMQVFEVFKS 150
Query: 673 FGHTSYVRNTCVFGG 717
+ + GG
Sbjct: 151 LNTYHILSMALLIGG 165
>UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase
CG14443; n=1; Drosophila melanogaster|Rep: Putative
ATP-dependent RNA helicase CG14443 - Drosophila
melanogaster (Fruit fly)
Length = 438
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 502
YR +H +T++ + N P+ FE + F + Q ++ GY PTPIQAQ W IA GK
Sbjct: 11 YRKRHNITLTSWNMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGK 70
Query: 503 NLL 511
N++
Sbjct: 71 NIV 73
Score = 50.0 bits (114), Expect = 6e-05
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 397 RSKFS*LCATRCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHIN 576
RS F+ + +D G + + + K + ++ G+GKTL Y+LP I+ ++
Sbjct: 36 RSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMKMH 95
Query: 577 NQPPI-RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 720
NQ + + GPI L+L RE A +Q+ + + +R C+ G +
Sbjct: 96 NQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGNS 144
>UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;
n=3; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 39 - Oryza sativa subsp. japonica (Rice)
Length = 625
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHINNQPPI----RRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 690
TGSGKTLAY+LP + + + + P A+VL PTREL +Q+ +VA H +
Sbjct: 156 TGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHAR 215
Query: 691 VRNTCVFGGAPKREQ 735
R+T V GG+ R Q
Sbjct: 216 FRSTMVSGGSRIRPQ 230
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG- 678
+ + AKTGSGKTLA+++P I + + DG AL+++PTRELA QI +V G
Sbjct: 80 DVLAAAKTGSGKTLAFLVPVIEKLYREK-WTEFDGLGALIISPTRELAMQIYEVLTKIGS 138
Query: 679 HTSYVRNTCVFGGAPKRE 732
HTS+ + G K E
Sbjct: 139 HTSFSAGLVIGGKDVKFE 156
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + A+TGSGKTLA+++P IV I N+ + +G A++++PTRELA Q V
Sbjct: 119 KDIMAKARTGSGKTLAFLIP-IVEILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKIL 177
Query: 679 HTSYVRNTCVFGGAPKREQ 735
S T + GG+ K+++
Sbjct: 178 AHSERTRTLIIGGSSKKKE 196
Score = 33.1 bits (72), Expect = 7.3
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
++ N + +Q+ ++ GY + T IQA+ P+ + GK+++A
Sbjct: 83 YKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMA 123
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 54.4 bits (125), Expect = 3e-06
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+FIG+A TG+GKT A+ +P I +I++ + ALVL+PTRELA Q+ + G
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQ-----ALVLSPTRELALQVAEQLTLLGK 138
Query: 682 TSYVRNTCVFGGAPKREQ 735
VR ++GGA R Q
Sbjct: 139 KKGVRVVTIYGGASYRTQ 156
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
+ FE V + MG+ PTPIQ Q PI ++G N
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGAN 83
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ I + TG+GKTLAY LP + I +P + P A++LAP+REL QI QV D+
Sbjct: 42 KDVIAESPTGTGKTLAYALPVLERI--KPEQKH---PQAVILAPSRELVMQIFQVIQDWK 96
Query: 679 HTSYVRNTCVFGGAPKREQ 735
S +R + GGA ++Q
Sbjct: 97 AGSELRAASLIGGANVKKQ 115
Score = 34.3 bits (75), Expect = 3.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 404 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
N ++Q+ G+++PTP+Q Q + M GK+++A
Sbjct: 10 NAQSFIQENWNASGFQKPTPVQEQAAQLIMDGKDVIA 46
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFG 678
+ + A+TG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+ ++G
Sbjct: 43 DLLAEAQTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYG 100
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R V+GG P Q
Sbjct: 101 RDLGMRVISVYGGVPVENQ 119
Score = 38.3 bits (85), Expect = 0.19
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F E +Q +K +GY++PTPIQ+Q P+ + G +LLA
Sbjct: 6 FAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLA 46
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFG 678
+ +G A+TG+GKT A+ +P + + + +G I ALVLAPTRELA QI + +G
Sbjct: 40 DLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYG 99
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+R +FGG + Q
Sbjct: 100 VNLPLRTLVIFGGVGQAPQ 118
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/89 (38%), Positives = 50/89 (56%)
Frame = +1
Query: 469 SSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 648
++ + D ++ +G A TGSGKTLA+ LP +V + RRG P +VL PTRELA
Sbjct: 42 AATIPDVLAGRDVLGRAPTGSGKTLAFGLPMLVRLKGAAS-RRG-FPRGIVLVPTRELAL 99
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
QI++ + + +R V GG P + Q
Sbjct: 100 QIERALDEPALSVGLRVANVVGGIPIKRQ 128
>UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 563
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
A TG+GKT+AY+ P I H++ P I R G ALVL PTREL Q+ ++ H
Sbjct: 75 AATGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLH 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,815,636
Number of Sequences: 1657284
Number of extensions: 15760374
Number of successful extensions: 45843
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 42870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45018
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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