Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00765
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 88 8e-18
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 75 5e-14
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 64 1e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 60 1e-09
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 57 2e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 54 1e-07
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 50 1e-06
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 50 3e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 5e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 47 1e-05
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 45 7e-05
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 41 0.001
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 41 0.001
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 38 0.006
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 36 0.026
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 36 0.034
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 36 0.034
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 36 0.045
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 33 0.24
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 32 0.56
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 31 0.97
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.9
SB_23248| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 29 5.2
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 28 6.9
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 92.3 bits (219), Expect = 4e-19
Identities = 43/80 (53%), Positives = 55/80 (68%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG
Sbjct: 555 RDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFG 614
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ VFGG K EQ+
Sbjct: 615 KAYNIHVVAVFGGGNKYEQS 634
Score = 74.9 bits (176), Expect = 6e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PFNKNFY+ HP + K+S E+++ R K + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*PK----RVPAKRWP 547
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 574
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/63 (61%), Positives = 49/63 (77%)
Frame = +1
Query: 547 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 726
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA G +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172
Query: 727 REQ 735
Q
Sbjct: 173 GPQ 175
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +2
Query: 308 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 475
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 75.4 bits (177), Expect = 5e-14
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 666
++ IGVA+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEI 198
Query: 667 ADFGHTSYVRNTCVFGGAPK 726
FG +R V GGA +
Sbjct: 199 LKFGRPLGIRTVSVIGGADR 218
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 654
++ IG+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 110 RDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/101 (28%), Positives = 49/101 (48%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 446 YKEPTPIQAQGWPIAMSGKNLLA*PKRVPAKRWPTSCQPLC 568
++ PTPIQ Q MSG++++ + K S PLC
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 131
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 61.7 bits (143), Expect = 6e-10
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
QPF K+FY P + K +P E +E+R E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA---*PKRVPAKRWPTSCQPLC 568
Y++PTPIQAQ P+ MSG++++A P R A + C+ C
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = +1
Query: 535 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 714
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 715 GAPKREQ 735
G EQ
Sbjct: 181 GTGISEQ 187
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/91 (30%), Positives = 49/91 (53%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 461 PIQAQGWPIAMSGKNLLA*PKRVPAKRWPTS 553
PIQ Q P+ +SG++++ K P+S
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLLPSS 251
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINN-QPPIRRGDGP 609
+D G+ +S Y ++ IG A+TG+GKTL++ LP + + + + +RG P
Sbjct: 89 EDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAP 148
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
LV+APTRELA+Q+ + S + C++GG P Q
Sbjct: 149 KVLVMAPTRELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQ 188
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + A+TGSGKT AY+LP + + Q P+AL +APTRELA+QI A F
Sbjct: 517 RDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFS 576
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ ++ +GG QA
Sbjct: 577 DHTPIKVCVCYGGVSVPYQA 596
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 356 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G AKTGSGKTLA+++P I + Q DG ALV++PTRELA Q +V G
Sbjct: 88 RDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIG 146
Query: 679 HTSYVRNTCVFGGAP-KREQ 735
+ + + GG K EQ
Sbjct: 147 NKHDLSAGLIIGGKDLKNEQ 166
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ F + G+ G+ PT IQ QG P+A+SG+++L
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVL 91
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADF 675
++ I A++G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V
Sbjct: 123 RDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLAL 182
Query: 676 GHTSYVRNTCVFGGAPKRE 732
G +V+ GG RE
Sbjct: 183 GDYMHVKCHACIGGTNVRE 201
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVA 666
++ + A+TGSGKT A++LP + + N P A+ +APTRELA QI A
Sbjct: 749 RDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEA 808
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
F H + +R +GG Q
Sbjct: 809 RKFAHGTMLRPVVCYGGVSVSHQ 831
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 506 LLA 514
++A
Sbjct: 751 VMA 753
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/102 (29%), Positives = 51/102 (50%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
KD G +A ++ +G AKTGSGKTLA+++P +V + + + +G
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRNGTG 646
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 738
++++PTREL+ Q VA D + GG ++ +A
Sbjct: 647 VIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEA 688
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/80 (38%), Positives = 42/80 (52%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG AKTGSGKT A+ LP + + + P G A+VL PTRELA QI G
Sbjct: 45 RDCIGCAKTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELAFQIADQFKVLG 99
Query: 679 HTSYVRNTCVFGGAPKREQA 738
++ + GG +QA
Sbjct: 100 RPIGLKEAVIVGGLDMMKQA 119
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + +A+TGSGKT A+++P + G AL+L+PTRELA Q Q+ + G
Sbjct: 319 KDVVAMARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELG 375
Query: 679 HTSYVRNTCVFGG 717
+ ++++ + GG
Sbjct: 376 RFTGLKSSVILGG 388
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/80 (38%), Positives = 42/80 (52%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ IG+A+TGSGKT A+ LP + + + P AL+L PTRELA QI + G
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALG 56
Query: 679 HTSYVRNTCVFGGAPKREQA 738
V+ + GG QA
Sbjct: 57 SGIGVKCAVIVGGIDMMSQA 76
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 320 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 487
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 488 AMSG 499
G
Sbjct: 197 MAHG 200
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 547 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 654
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.4 bits (110), Expect = 6e-06
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Frame = +1
Query: 436 DNGLQRTDAHSSSRLADSYVW-KEFIGVAKTGSGKTLAYILPAIVHIN-------NQPPI 591
D G + S + + ++ ++ IG A+TGSGKTLA+ +P I HI Q P
Sbjct: 147 DQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPS 206
Query: 592 -------RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG--APKREQ 735
+G +AL++APTRELA Q++ + V+ + GG APK+++
Sbjct: 207 DKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQR 263
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAAD 672
I A+TGSGKTLAY+ P +VH + R G P A ++ P RELA QI + A
Sbjct: 419 ICAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKS 477
Query: 673 FGHTSYVRNTCVFGGAPKR 729
H + R+ + GG ++
Sbjct: 478 LCHHARFRSVGLIGGRKQK 496
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/92 (32%), Positives = 46/92 (50%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + ++ I A++G+GKT + + + I+ Q +R P ALV
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQALV 70
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 717
L+PTRELA QIQ+V G V+ GG
Sbjct: 71 LSPTRELANQIQKVVLALGDYMSVQCHACIGG 102
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 506 LLA 514
++A
Sbjct: 174 VMA 176
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + AK G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 85 RDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAK 538
FE+ + G+ G+ +P+PIQ + P+A++G+++LA K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + AK G+GKT AY++P + + + ALVL PTRELA Q Q+ + G
Sbjct: 85 RDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*PKRVPAK 538
FE+ + G+ G+ +P+PIQ + P+A++G+++LA K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 669
++ GVA GSGK LAY+LP I I + +GP+ L+L + ++ V
Sbjct: 225 RDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCE 284
Query: 670 D-FGHTSYVRNTCVFGGAPKREQ 735
D + R +FGG + ++
Sbjct: 285 DLIRNRRRTRVQMIFGGGAEEDR 307
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +1
Query: 469 SSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 648
+S + + + K+ A TG+GKT A++LP + + +P + LV+ PTRELA
Sbjct: 38 ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAI 95
Query: 649 Q 651
Q
Sbjct: 96 Q 96
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 425 QGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.9 bits (79), Expect = 0.034
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 427 RCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG 606
+ K G+ + L + K + ++TG+GK+L ++LP++ Q P RG G
Sbjct: 174 KLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP-GRGYG 227
Query: 607 PIALVLAPTRELA-QQIQQVAADFGHTSYV 693
I ++ PTRELA Q + +V+ G S V
Sbjct: 228 TI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 35.9 bits (79), Expect = 0.034
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +1
Query: 478 LADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 657
LAD V I +++G+GKT A++L + ++ P P + L+PT ELA+Q
Sbjct: 138 LADPPV--NMIAQSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTG 190
Query: 658 QVAADFG-HTSYVR-NTCVFGGAPKREQ 735
+VA G H +++ N V G R Q
Sbjct: 191 KVAEAMGKHCPHIKINYAVRGNQFPRGQ 218
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 341 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 496
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +1
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 717
P ALVL+PTRELA QIQ+V G V+ GG
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGG 40
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPP 588
++ + A+TGSGKT A+++P + I + P
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRIYMEGP 942
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 33.1 bits (72), Expect = 0.24
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 436 DNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
D G + + + + + I AK+G GKT ++L + + P+ DG ++
Sbjct: 64 DCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLE---PV---DGQVS 117
Query: 616 -LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGG 717
LV+ TRELA QI + F + S ++ FGG
Sbjct: 118 VLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 33.1 bits (72), Expect = 0.24
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 436 DNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
D G + + + + + I AK+G GKT ++L + + P+ DG ++
Sbjct: 64 DCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLE---PV---DGQVS 117
Query: 616 -LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGG 717
LV+ TRELA QI + F + S ++ FGG
Sbjct: 118 VLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
+ I AK+G+GKT + + A+ ++ I + ++L PTRE+A Q++ V G
Sbjct: 52 DLIAQAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIG 105
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 31.1 bits (67), Expect = 0.97
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +2
Query: 314 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G + W
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG----ANLAICQWGFDD 306
Query: 494 SGKNLLA*PKRVPAKRW 544
+LL +PA RW
Sbjct: 307 EANHLLL-QNHLPAVRW 322
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 368 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 481
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 198 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 88
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 326 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 418
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_23248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 29
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 263 VGVNRIPIWASHVLPSREF 207
VGV I WAS++LPSR+F
Sbjct: 10 VGVRDIEQWASNLLPSRQF 28
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 222 QNMRRPDWDSVHSNLSTKTFMIHILQFSKD 311
+N RR WDS HSN+S + H+ F D
Sbjct: 768 RNKRR--WDSFHSNVSADSGSAHMFDFDTD 795
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/83 (24%), Positives = 35/83 (42%)
Frame = +1
Query: 466 SSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 645
S SRL+ + W E + A +GS +P ++ + N PP +RG + T E
Sbjct: 143 SPSRLSSALKWSEKVKEANSGS-------VPMVLVVENIPPSKRGKPMEWIGKGKTAESK 195
Query: 646 QQIQQVAADFGHTSYVRNTCVFG 714
+ + + A G + +G
Sbjct: 196 EVMDRFCAKHGFAGWFELNSRYG 218
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,866,859
Number of Sequences: 59808
Number of extensions: 497862
Number of successful extensions: 1337
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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