Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00765
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 86 2e-17
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 77 2e-14
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 72 4e-13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 58 6e-09
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 58 6e-09
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 58 6e-09
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 50 1e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 50 1e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 49 3e-06
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 49 3e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 49 3e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 7e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 7e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 7e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 48 7e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 48 7e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 48 9e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 48 9e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 48 9e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 2e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 44 1e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 42 5e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 42 5e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 41 8e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 41 0.001
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 41 0.001
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.030
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 34 0.091
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 34 0.091
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 34 0.12
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.28
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 30 2.0
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.0
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.4
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.4
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.4
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 29 4.5
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 29 4.5
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 29 4.5
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 29 4.5
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 103 bits (247), Expect = 1e-22
Identities = 47/80 (58%), Positives = 62/80 (77%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +AKTGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC 226
Query: 679 HTSYVRNTCVFGGAPKREQA 738
H+ ++ TC+FGGA K QA
Sbjct: 227 HSLGLKMTCLFGGASKGPQA 246
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/87 (33%), Positives = 54/87 (62%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+++PT IQ+ WPIAMSG+++++
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIIS 171
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/80 (48%), Positives = 56/80 (70%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AKTGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFC 362
Query: 679 HTSYVRNTCVFGGAPKREQA 738
+ C +GG K EQ+
Sbjct: 363 KVYNINPICAYGGGSKWEQS 382
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*PK----RVPAKRWP 547
Y++PTPIQA P A+SG+++L K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AKTGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFA 401
Query: 679 HTSYVRNTCVFGGAPKREQ 735
++ C +GG EQ
Sbjct: 402 KPLGLKVACTYGGVGISEQ 420
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 442
F KNFY + + + EV+ YR + + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 443 GYKEPTPIQAQGWPIAMSGKNLL 511
Y +PT IQAQ P MSG++++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVI 345
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 666
++ IGVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 667 ADFGHTSYVRNTCVFGGAPKREQ 735
FG ++ V GGA + +Q
Sbjct: 399 NKFGKLLGIKTVSVIGGASREDQ 421
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 332 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 72.1 bits (169), Expect = 4e-13
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 603
+ NG ++ S ++ IGV++TGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 604 ---GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
P LVL+PTRELAQQI+ + + Y ++ C++GG + EQ
Sbjct: 160 QKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQ 205
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPIQYFEEAN 406
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 407 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 58.0 bits (134), Expect = 6e-09
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 649 QIQQVAADFGHTSYVRNTCVFGG 717
QI + A F + S ++ ++GG
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGG 259
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 506 LLA 514
L++
Sbjct: 179 LMS 181
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 58.0 bits (134), Expect = 6e-09
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 649 QIQQVAADFGHTSYVRNTCVFGG 717
QI + A F + S ++ ++GG
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGG 243
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 506 LLA 514
L++
Sbjct: 163 LMS 165
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 58.0 bits (134), Expect = 6e-09
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + A+TGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 649 QIQQVAADFGHTSYVRNTCVFGG 717
QI + A F + S ++ ++GG
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGG 240
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 326 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 506 LLA 514
L++
Sbjct: 160 LMS 162
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 654
++ IG+A TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 463
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 464 IQAQGWPIAMSGKNLL 511
IQ QG P+A+SG++++
Sbjct: 216 IQIQGIPVALSGRDMI 231
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R C+ GG EQ
Sbjct: 118 RFTGLRCACLVGGDQIEEQ 136
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
H +++ V + ++ G+ +PTPIQ + P M GK+++A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R C+ GG EQ
Sbjct: 118 RFTGLRCACLVGGDQIEEQ 136
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
H +++ V + ++ G+ +PTPIQ + P M GK+++A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 666
K+ + A+TGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 667 ADFGHTSYVRNTCVFGG 717
F + S + V+GG
Sbjct: 396 RKFSYQSVMEIKPVYGG 412
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F +++ P +++ V+ GY TPIQ P+ GK++LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 666
K+ + A+TGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 667 ADFGHTSYVRNTCVFGG 717
F + S + V+GG
Sbjct: 396 RKFSYQSVMEIKPVYGG 412
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F +++ P +++ V+ GY TPIQ P+ GK++LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 660
+ +G A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/97 (31%), Positives = 49/97 (50%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + K+ I A++G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 732
+APTRELAQQIQ+V + G V GG R+
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/97 (31%), Positives = 49/97 (50%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + K+ I A++G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 732
+APTRELAQQIQ+V + G V GG R+
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRD 139
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + AKTGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELL 164
Query: 679 HTSYVRNTCVFGGA 720
S + V GG+
Sbjct: 165 EGSNLTYGLVMGGS 178
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + A+TGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 670 DFGHTSYVRNTCVFGG 717
F + + + V+GG
Sbjct: 440 KFAYQTMMEIKPVYGG 455
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + A+TGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 670 DFGHTSYVRNTCVFGG 717
F + + + V+GG
Sbjct: 440 KFAYQTMMEIKPVYGG 455
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + A+TGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 670 DFGHTSYVRNTCVFGG 717
F + + + V+GG
Sbjct: 440 KFAYQTMMEIKPVYGG 455
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTALGK 182
Query: 682 TSYVRNTCVFGGAPKREQA 738
++ + + GG QA
Sbjct: 183 PITLKCSVIVGGRSLIHQA 201
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTALGK 182
Query: 682 TSYVRNTCVFGGAPKREQA 738
++ + + GG QA
Sbjct: 183 PITLKCSVIVGGRSLIHQA 201
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + A+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 670 DFGHTSYVRNTCVFGG 717
F + + + V+GG
Sbjct: 651 KFAYQTMMEIRPVYGG 666
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + A+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 670 DFGHTSYVRNTCVFGG 717
F + + + V+GG
Sbjct: 651 KFAYQTMMEIRPVYGG 666
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + A+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 670 DFGHTSYVRNTCVFGG 717
F + + + V+GG
Sbjct: 651 KFAYQTMMEIRPVYGG 666
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/103 (32%), Positives = 47/103 (45%)
Frame = +1
Query: 430 CKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGP 609
C+ G + + L + K+ IG+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 738
LVL PTRELA QI Q G + + GG QA
Sbjct: 114 FCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQA 156
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 660
++ +G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQ 735
T+ + T + GG + +Q
Sbjct: 87 HINALISTTQLIATSIVGGLAQVKQ 111
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 660
++ +G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQ 735
T+ + T + GG + +Q
Sbjct: 254 HINALISTTQLIATSIVGGLAQVKQ 278
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMS 208
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 645
++ + A+TGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 646 QQIQQVAADFGHTSYVRNTCVFGG 717
QI + F + + + + ++GG
Sbjct: 264 LQIFNESRKFAYRTPITSALLYGG 287
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 663
K +G A+TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +1
Query: 433 KDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
KDN + +A S + +G AKTGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 613 ALVLAPTRELAQQ 651
AL+++PTRELA Q
Sbjct: 151 ALIISPTRELALQ 163
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/99 (27%), Positives = 47/99 (47%)
Frame = +1
Query: 436 DNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
+ G ++ + + + ++ + AK G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 732
+V+ PTRELA Q Q+ + ++ GG R+
Sbjct: 115 MVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRD 153
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 702
TGSGKTLA++LP + I N G AL+L+P+REL QI V F +
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 703 CVFGG 717
V GG
Sbjct: 113 TVTGG 117
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
+ + A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 667 ADFGHTSYVRNTCVFGG 717
+ + ++ FGG
Sbjct: 835 RQLTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 502 EFIGVAKTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
+ + A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 667 ADFGHTSYVRNTCVFGG 717
+ + ++ FGG
Sbjct: 835 RQLTYETGLKCGLAFGG 851
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 663
K+ A TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICA 190
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I A++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
Query: 679 HTSYVRNTCVFGG 717
V+ GG
Sbjct: 119 DYMNVQCHACIGG 131
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I A++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
Query: 679 HTSYVRNTCVFGG 717
V+ GG
Sbjct: 119 DYMNVQCHACIGG 131
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 499 KEFIGVAKTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 651
+ + A TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 34.3 bits (75), Expect = 0.091
Identities = 23/100 (23%), Positives = 48/100 (48%)
Frame = +1
Query: 427 RCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG 606
R K++ R + + + ++ + AK+G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 726
+++ PTRE++ QI++ T + V G A K
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHK 130
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 34.3 bits (75), Expect = 0.091
Identities = 23/100 (23%), Positives = 48/100 (48%)
Frame = +1
Query: 427 RCKDNGLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDG 606
R K++ R + + + ++ + AK+G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 726
+++ PTRE++ QI++ T + V G A K
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHK 130
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
I A++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 252 IAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
I A++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 277 IAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 508 IGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
I A++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 661 IAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
A TGSGKT+ Y+LP + + ++P A++L P + L QI + S V
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESGVA 218
Query: 697 NTCVFGGA 720
GA
Sbjct: 219 KVVSLSGA 226
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 517 AKTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 654
A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +1
Query: 442 GLQRTDAHSSSRLADSYVWKEFIGVAKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A S +A K+ ++ GSGKT+ ++ + I+ + + ++
Sbjct: 15 GFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VIL 69
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCV 708
LAP R +AQ+ + G V TC+
Sbjct: 70 LAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 8 PASERIHSLNKHLQLNPKNNHVW 76
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 94 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 210
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 149 RRIIAEFVASSKFGTTVSTAIIPI 78
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 149 RRIIAEFVASSKFGTTVSTAIIPI 78
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVH 570
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 656 SKLLQILDTHLMFVTRVCLVVLLKESK 736
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 505 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 242 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 63
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 62 FSDLVEDVYLNYGFFLTQ 9
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 242 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 63
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 62 FSDLVEDVYLNYGFFLTQ 9
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 242 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 63
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 62 FSDLVEDVYLNYGFFLTQ 9
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 242 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 63
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 62 FSDLVEDVYLNYGFFLTQ 9
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 184 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 276
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 445
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 184 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 276
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical
protein Y56A3A.5 protein.
Length = 762
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 245 GFCSLQPFNKNFYDPHPTVLKRSPYEVEEYR 337
GFCS+ P N+ + LK YEV+E++
Sbjct: 478 GFCSVSPSNQRAVEETIGKLKELGYEVKEFK 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,979,217
Number of Sequences: 27780
Number of extensions: 379848
Number of successful extensions: 1235
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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