Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00763
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 36 0.028
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 36 0.028
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 36 0.028
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 36 0.037
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 34 0.15
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 34 0.15
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 31 0.80
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 31 1.4
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 30 2.5
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 29 3.2
SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_22756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2) 28 7.5
SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_53580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 388 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPRE 567
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + F PRE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 568 QILRPLSLRCPGTVCLPWKRHCHNSPS 648
+ L+ R L ++ N+P+
Sbjct: 151 VDMDSLTTRLDKEGKLHFEAKKRNAPA 177
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 388 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPRE 567
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + F PRE
Sbjct: 326 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 384
Query: 568 QILRPLSLRCPGTVCLPWKRHCHNSPS 648
+ L+ R L ++ N+P+
Sbjct: 385 VDMDSLTTRLDKEGKLHFEAKKRNAPA 411
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 79
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 282 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 313
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 388 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPRE 567
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + F PRE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 568 QILRPLSLRCPGTVCLPWKRHCHNSPS 648
+ L+ R L ++ N+P+
Sbjct: 151 VDMDSLTTRLDKEGKLHFEAKKRNAPA 177
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 79
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 388 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPRE 567
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + F PRE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 568 QILRPLSLRCPGTVCLPWKRHCHNSPS 648
+ L+ R L ++ N+P+
Sbjct: 151 VDMDSLTTRLDKEGKLHFEAKKRNAPA 177
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFALPEGVEASNVKTRISNHGQLHIEA 79
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 36.3 bits (80), Expect = 0.028
Identities = 24/87 (27%), Positives = 41/87 (47%)
Frame = +1
Query: 388 QDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPRE 567
+ +GD K + DV+ + P+ I V+ + N+LLV A HE + + F PRE
Sbjct: 92 ESKGDDK-FSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFVLPRE 150
Query: 568 QILRPLSLRCPGTVCLPWKRHCHNSPS 648
+ L+ R L ++ N+P+
Sbjct: 151 VDMDSLTTRLDKEGKLHFEAKKRNAPA 177
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFALPEGVEASNVKTRISNHGQLHIEA 79
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 35.9 bits (79), Expect = 0.037
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA---PLPQLAI 647
R++NR F+LP+ + + + L +DGVL +EA PL QL I
Sbjct: 140 RQFNRHFVLPREVDMDTLVPRLGKDGVLYIEADKRPLRQLDI 181
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 501 RGESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
R ES+ +E+ R + LP+G + +I + ++ DG+L VEA
Sbjct: 37 RHESEEGFDSKEFRRCYNLPEGVDESSISTRIAEDGMLHVEA 78
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 400 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 504
D L DVS + PEE+ VK ++L V A+ E
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE 130
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +1
Query: 394 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPREQI 573
E + DV + PE I V+ + N+LLV A HE + + F PRE
Sbjct: 93 ESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFILPREVD 152
Query: 574 LRPLSLRCPGTVCLPWKRHCHNSPS 648
+ L+ R L ++ N+P+
Sbjct: 153 MDSLTTRLDKEGKLHFEAKKRNAPA 177
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 49 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 80
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 531 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+E+ R F LP+G +PE + S +S G L +EA
Sbjct: 48 KEFRRTFTLPEGIDPENVTSRISNHGHLHIEA 79
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 418 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPREQILRPLSLR 594
+ DV+ + PE I V+ + N+LLV+A HE + + F PRE + L+ R
Sbjct: 100 MAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGHYHAMHFNRQFVLPREVDMDSLTTR 158
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 537 YNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
+NR+F+LP+ + +++ + L ++G L EA
Sbjct: 140 FNRQFVLPREVDMDSLTTRLDKEGKLHFEA 169
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 480 ITGPRQTRGESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
I G ++ GE ++ E++R + LP G + + S ++ DG+L +EA
Sbjct: 66 IDGKHKSEGEHGYET--SEFHRSYNLPDGVDVSTVSSRITGDGLLHIEA 112
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 540 NREFLLPKGTNPEAIKSSLSRDGVLTVEA 626
NR F+LPK + +++ S L +DG L +EA
Sbjct: 160 NRHFVLPKDVDMDSLVSRLGKDGKLYIEA 188
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 394 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 504
EGD K DV Y PEEI +K ++ + KH+
Sbjct: 36 EGD-KVEIATLDVKNYRPEEISLKVEHGRIKIDGKHK 71
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = +1
Query: 220 NEEDGRRNEQIQSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEPSHWDSLNSPLIQDEG 399
N++DG + ++ + + + DS + E + WD+ + D+G
Sbjct: 1529 NQDDGTTGQNKKAPYSKDDQEQYQEGKVLDEGNGYDRDSHEGKEKNEWDNYDGD--NDDG 1586
Query: 400 DGKTLKLRFDVSQYTPEE 453
D KT++ D S Y E
Sbjct: 1587 DSKTIEANKDKSVYHHSE 1604
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 400 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 504
D L DVS + PEE+ VK ++L V A+ E
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE 58
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +2
Query: 173 VIDTEFSSIRERFDAEMRKMEEEMSKFNQNS*TEKATISSR 295
++++E + +RE+ E+ +MEE M + + E+A+I +
Sbjct: 836 LMESEITELREKHQQELGEMEERMKELQKQHDAEQASIKKK 876
>SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 686 DRSVLLDRNVPVRDGELWQWRFHGKHTVPGQRR 588
D S L++ +P++D L RF G VPG++R
Sbjct: 444 DSSQALEKILPLQDKPLATVRFQGSRKVPGKKR 476
>SB_22756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Frame = +1
Query: 523 LCTENTTGSFCCPREQILRPLSLRCPGTVC-LPWKRHCHNSPSRTG----TFLSRSTERS 687
+CTE CPR + + RC T+C +P H ++ T L
Sbjct: 65 VCTEEFLSLTVCPRHRDSYGIRYRCHKTLCSVPATFASHGKKAKVDKASITLLQSEQLFK 124
Query: 688 HHSPRVH*GSRYSITVNNLFLIY 756
V GSRY I + N+ L Y
Sbjct: 125 QTGHLVPVGSRYRIDIMNIALPY 147
>SB_53753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +2
Query: 170 SVIDTEFSSIRERFDAEMRKMEEE---MSKFNQNS*TEKATISSRAQLARRHLHSIVTAD 340
++I ++F + +R + E + N + T + +A+ HS+ T +
Sbjct: 44 NIIGNSLKDNPKKFWSYVRSSKSESIGIPPLKNNDSSVSVTDAHKAETLNTFFHSVFTQE 103
Query: 341 SLPSPVTGI 367
LP+PV GI
Sbjct: 104 QLPTPVLGI 112
>SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2)
Length = 474
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 159 SLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHSTADKT 10
SL GI LL + + I ++E +E + KR R + +W+ TH + T
Sbjct: 412 SLAGIVLLN--TQLLCCIVKLEKMEKGRAQKRKRKRSNYWDTTHQESTDT 459
>SB_43238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2532
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 430 VSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPREQILRPLSLRCPG-T 606
+S + I+ +++ L H HE + I N C++ + S C R+++ R + G
Sbjct: 2446 ISDVGKKAIIDACSESESLQHLFHESDPILNSCSKPHSLSICI-RDKLFRQKTTEKLGFP 2504
Query: 607 VCLPWKRHCHNSPSRTGTF 663
V P+KR+ + G F
Sbjct: 2505 VHNPYKRYHRGVECKVGVF 2523
>SB_53580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 721 ICCLSGLVANDETAQCFWIGMFLSVMASCGNGASTVSTPS 602
+ L+ +AN+ T + WIG F +V S G +S P+
Sbjct: 61 LATLTASIANNSTRKKLWIGAFFTVDISDGGWSSAGVLPA 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,848,148
Number of Sequences: 59808
Number of extensions: 474440
Number of successful extensions: 1380
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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