Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00762
(550 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 171 5e-43
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 171 5e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 171 5e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 171 5e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 171 5e-43
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 1.4
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 1.4
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 5e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGN-HT 515
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGS 550
KPHTVPCKVTGKCGS
Sbjct: 159 KPHTVPCKVTGKCGS 173
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 5e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGN-HT 515
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGS 550
KPHTVPCKVTGKCGS
Sbjct: 159 KPHTVPCKVTGKCGS 173
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 171 bits (416), Expect = 5e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGN-HT 515
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGS 550
KPHTVPCKVTGKCGS
Sbjct: 159 KPHTVPCKVTGKCGS 173
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 171 bits (416), Expect = 5e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGN-HT 515
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGS 550
KPHTVPCKVTGKCGS
Sbjct: 159 KPHTVPCKVTGKCGS 173
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 171 bits (416), Expect = 5e-43
Identities = 86/106 (81%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
Frame = +3
Query: 201 KNRQTREHLLVFFTNQRIEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 380
K + E L + EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGDN
Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116
Query: 381 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGN-HT 515
NGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIG HT
Sbjct: 117 NGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHT 162
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKE 252
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKE
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKE 73
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 506 KPHTVPCKVTGKCGS 550
KPHTVPCKVTGKCGS
Sbjct: 159 KPHTVPCKVTGKCGS 173
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 148 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 5
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 148 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 5
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,375,698
Number of Sequences: 53049
Number of extensions: 524099
Number of successful extensions: 2679
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2181
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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