Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00761
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    30   0.020
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    28   0.061
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.43 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 29.9 bits (64), Expect = 0.020
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = -2

Query: 287 RKHGSQSCRPSVDGVNFAISSS---VRVPALFHQACLFCIGIREVAFLAYVCSIGDLILV 117
           ++H +   RPS+  ++  ++ S   + +P +    C F IG+    F  Y+ + G +ILV
Sbjct: 478 QEHRNGMYRPSIYFISKTLAESPIFIIIPVILTSVCYFMIGLNSQGFRFYI-ACGIMILV 536

Query: 116 FVTAI 102
              AI
Sbjct: 537 ANVAI 541


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 28.3 bits (60), Expect = 0.061
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = -2

Query: 287 RKHGSQSCRPSVDGVNFAISSS---VRVPALFHQACLFCIGIREVAFLAYVCSIGDLILV 117
           ++H +   RPS+  ++  ++ S   + +P      C F IG+    F  Y+ + G +ILV
Sbjct: 478 QEHRNGMYRPSIYFISKTLAESPIFIIIPVTLTSVCYFMIGLNSHGFRFYI-ACGIMILV 536

Query: 116 FVTAI 102
              AI
Sbjct: 537 ANVAI 541


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = -1

Query: 237 CHQLQCKSTSPFSPG----LPLLYWDS*SSLPRLRVFHRRFDTRICNC 106
           C Q  C   +P +P     L LLY D  + LP+  +FH   D     C
Sbjct: 338 CIQPPCGQLNPINPNVFDVLKLLYNDIVNMLPKGEIFHMGGDEVYIPC 385


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 660 KICIRSFKHYLLFTVTWIVLFL 595
           ++C   +  ++L  V WIVL L
Sbjct: 292 EVCNAGYLPFILLQVAWIVLHL 313


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 209 ALFHQACLFCIGIREVAFLAYVCSI 135
           A  H   +F +GI   A + Y+C +
Sbjct: 628 AWLHLLYIFLVGIMYAADVFYICHV 652


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 625 FYRNLDSFVLG-GMTGMDSDWELG*GSR*GAELGSKKEL 512
           F R+  +F+      GMD  WE     + G +L  K+ L
Sbjct: 277 FIRSAITFIKQYNFDGMDIHWEYPGAEKMGGQLSDKEYL 315


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 592 GMTGMDSDWELG*GS 548
           G  G+D DWE   GS
Sbjct: 202 GFDGLDIDWEYPKGS 216


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 206 LFHQACLFCIGI 171
           L+   CLFCI +
Sbjct: 498 LYRMTCLFCINV 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,041
Number of Sequences: 336
Number of extensions: 2931
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)