Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00761
         (675 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1148 + 31264847-31264870,31264987-31265062,31265226-31265887     29   2.6  
02_05_1039 + 33707196-33708815                                         29   3.4  
01_01_1189 + 9454042-9455655                                           29   3.4  
03_05_0560 + 25636969-25637227,25637744-25637793,25637813-25638748     29   4.5  

>04_04_1148 + 31264847-31264870,31264987-31265062,31265226-31265887
          Length = 253

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +2

Query: 242 LHRPHWA-DKTGYHAYGDHLPTPPPVPAAIQ 331
           +H P++A + T Y+A G + P PPP+PA ++
Sbjct: 196 VHLPYYAANATPYYA-GGYYPIPPPMPAMLR 225


>02_05_1039 + 33707196-33708815
          Length = 539

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +2

Query: 233 WQSLHRPHWADKTGY---HAYGDHLPTPPPVPAAIQAA 337
           W + +R  W D+ G+   + +G    +PPPVPA ++ A
Sbjct: 394 WVAEYR-RWMDRAGHGMPYYFGHSTLSPPPVPAVVEQA 430


>01_01_1189 + 9454042-9455655
          Length = 537

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 592 GMTGMDSDWELG*GSR*GAELGSKKELEGIVSWSLGGVVR 473
           G+ G + + E G G    AE G + E E    WS GG+++
Sbjct: 12  GVGGDEHEEERGEGEEAAAEQGEEGEAESGGGWSFGGLIK 51


>03_05_0560 + 25636969-25637227,25637744-25637793,25637813-25638748
          Length = 414

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 509 GDSKLELGWGSKMGLG 462
           GD KL+ GWG +MG G
Sbjct: 338 GDDKLDFGWGKRMGGG 353


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,810,847
Number of Sequences: 37544
Number of extensions: 356974
Number of successful extensions: 1155
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)