BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00759 (664 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 227 5e-60 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 226 1e-59 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 2e-52 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 183 1e-46 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 98 6e-21 SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12 SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 55 4e-08 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003 SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 38 0.007 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 30 1.9 SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 3.4 SB_23454| Best HMM Match : DUF1168 (HMM E-Value=4.2) 29 4.5 SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.5 SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5 SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77) 28 7.8 SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09) 28 7.8 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 227 bits (556), Expect = 5e-60 Identities = 106/149 (71%), Positives = 121/149 (81%) Frame = +3 Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEQSHRRCRQEPGG 242 MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTE+ + Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60 Query: 243 DEPQNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422 P+NT+FDAKRLIGRK +D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120 Query: 423 XMVLTKMKETAEAYLGKTVQNAVITVPAY 509 MVLTKMKETAEAYLG V +AV+TVPAY Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAY 149 Score = 83.4 bits (197), Expect = 1e-16 Identities = 41/46 (89%), Positives = 43/46 (93%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNV 646 F+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNV Sbjct: 150 FHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNV 195 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 226 bits (553), Expect = 1e-59 Identities = 108/149 (72%), Positives = 123/149 (82%) Frame = +3 Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEQSHRRCRQEPGG 242 M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTE+ + Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60 Query: 243 DEPQNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422 P+NTIFDAKRLIGR+ +DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120 Query: 423 XMVLTKMKETAEAYLGKTVQNAVITVPAY 509 MVL KMKETAEAYLG+ V +AVITVPAY Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAY 149 Score = 85.4 bits (202), Expect = 4e-17 Identities = 39/46 (84%), Positives = 44/46 (95%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNV 646 FNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NV Sbjct: 150 FNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNV 195 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 202 bits (493), Expect = 2e-52 Identities = 108/174 (62%), Positives = 120/174 (68%), Gaps = 25/174 (14%) Frame = +3 Query: 63 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEQSHRRCRQEPGG 242 M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD E+ + Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60 Query: 243 DEPQNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV- 419 P NTIFDAKRLIGR+ +D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120 Query: 420 ------------------------SXMVLTKMKETAEAYLGKTVQNAVITVPAY 509 S MVL KMKETAEAYLG V +AV+TVPAY Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 174 Score = 85.0 bits (201), Expect = 5e-17 Identities = 42/46 (91%), Positives = 42/46 (91%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNV 646 FNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNV Sbjct: 243 FNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNV 288 Score = 50.0 bits (114), Expect = 2e-06 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = +3 Query: 414 EVSXMVLTKMKETAEAYLGKTVQNAVITVPAY 509 ++S MVL KMKETAEAYLG V +AV+TVPAY Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 242 Score = 31.1 bits (67), Expect = 0.84 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +2 Query: 509 FNDSQRQATKDAG 547 FNDSQRQATKDAG Sbjct: 175 FNDSQRQATKDAG 187 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 183 bits (445), Expect = 1e-46 Identities = 91/144 (63%), Positives = 110/144 (76%), Gaps = 1/144 (0%) Frame = +3 Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-EQSHRRCRQEPGGDEPQN 257 +GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ E+ + P+N Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763 Query: 258 TIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSXMVLT 437 T+FDAKRLIGR +D +VQ D+K +PF+VV KP ++V K E KTF EE+S MVLT Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823 Query: 438 KMKETAEAYLGKTVQNAVITVPAY 509 KMKETAEAYLGK V +AV+TVPAY Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAY 847 Score = 77.4 bits (182), Expect = 1e-14 Identities = 36/46 (78%), Positives = 42/46 (91%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNV 646 FND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+ Sbjct: 848 FNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNI 892 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 97.9 bits (233), Expect = 6e-21 Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 3/167 (1%) Frame = +3 Query: 69 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTEQSHRRCRQEPGG 242 K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89 Query: 243 DEPQNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEV 419 P+NTI+DAKR IG+ + K + F V +D G V KG PEE+ Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149 Query: 420 SXMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA 560 V+ K++ AE L TV AV++VPA +K + ++ SLA Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLA 195 Score = 54.0 bits (124), Expect = 1e-07 Identities = 27/46 (58%), Positives = 34/46 (73%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNV 646 F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV Sbjct: 180 FDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANV 224 >SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1068 Score = 70.5 bits (165), Expect = 1e-12 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%) Frame = +3 Query: 252 QNTIFDAKRLIGRKSEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSXM 428 +NTI KR IGRK D VQ ++ H P++VV I+V Y G+ + F PE+V M Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAM 179 Query: 429 VLTKMKETAEAYLGKTVQNAVITVPAY 509 + T++K TAE L V + VI+VP+Y Sbjct: 180 LFTRLKTTAEIALKTKVTDCVISVPSY 206 Score = 41.9 bits (94), Expect = 4e-04 Identities = 17/39 (43%), Positives = 27/39 (69%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 625 + D QR+ DA +GLN LR++N+ TA ++AYG+ K+ Sbjct: 207 YTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245 Score = 35.9 bits (79), Expect = 0.029 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +3 Query: 81 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTEQ 209 VG D+G + V + G +E +AN+ +R TPS+V+ D ++ Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQR 46 >SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) Length = 179 Score = 55.2 bits (127), Expect = 4e-08 Identities = 39/71 (54%), Positives = 42/71 (59%), Gaps = 26/71 (36%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGL 616 FND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGL Sbjct: 49 FNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGL 108 Query: 617 DKK--GTGERN 643 DK G ERN Sbjct: 109 DKARGGKAERN 119 Score = 52.0 bits (119), Expect = 4e-07 Identities = 24/47 (51%), Positives = 35/47 (74%) Frame = +3 Query: 369 IKVAYKGEDKTFFPEEVSXMVLTKMKETAEAYLGKTVQNAVITVPAY 509 I V GE ++F PE++S +VL ++K AEA+LG+ V+ AVITVPA+ Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAH 48 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 39.1 bits (87), Expect = 0.003 Identities = 18/36 (50%), Positives = 25/36 (69%) Frame = +2 Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 616 FN ++R+A A + GLNVL+I+N TA A+ YGL Sbjct: 116 FNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = +3 Query: 363 PKIKVAYKGEDKTFFPEEVSXMVLTKMKETAEAYLGKTVQNAVITVPAY 509 P +K Y+ D TF PEE+ M+L + E + +++ V+TVP + Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPF 115 >SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) Length = 592 Score = 37.9 bits (84), Expect = 0.007 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +3 Query: 132 GKVEIIANDQGNRTTPSYVAFTDTEQ 209 G IIAND G+R TP+ VAF+DTE+ Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEK 108 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 29.9 bits (64), Expect = 1.9 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +3 Query: 141 EIIANDQGNRTTPSYVAFT 197 ++I N +G+RTTPS VAFT Sbjct: 7 KVIENAEGSRTTPSVVAFT 25 >SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) Length = 1011 Score = 29.1 bits (62), Expect = 3.4 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +3 Query: 360 KPKIKVAYKGEDKTFFPEEVSXMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQK 539 +PK K + E+ EE M ++K LGK V+ + T ++TL + Q Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713 Query: 540 MQ 545 Q Sbjct: 714 SQ 715 >SB_23454| Best HMM Match : DUF1168 (HMM E-Value=4.2) Length = 171 Score = 28.7 bits (61), Expect = 4.5 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 Query: 198 DTEQSHRRCRQEPGGDEPQNTIFDAKRLIGRKSEDATVQAD 320 +TE S R +PG EP+ T A+ +GR + A D Sbjct: 116 ETEASADEGRSDPGTAEPEQTASTAEGTLGRGTRRAATSTD 156 >SB_9053| Best HMM Match : TIG (HMM E-Value=0) Length = 2990 Score = 28.7 bits (61), Expect = 4.5 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 9 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 95 HVC +V T K K ++K PA GI+L Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228 >SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1506 Score = 28.7 bits (61), Expect = 4.5 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = -1 Query: 457 SAVSFIFVSTMXLTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTV 305 S F+F ST + +S +KV+ SPL + + P+ G S C V Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV 1158 >SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77) Length = 549 Score = 27.9 bits (59), Expect = 7.8 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -1 Query: 619 VKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTV 494 +K S R + VQ+ D CI+C L V+EYA V Sbjct: 404 IKKASKRLYALRSLKKSGVQSNDLVCIYCVLIRAVLEYAAPV 445 >SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09) Length = 1069 Score = 27.9 bits (59), Expect = 7.8 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +3 Query: 201 TEQSHRRCRQEPGGDEPQNTIFDAKRLIGRKSED 302 TE+ H+R ++ GD+P++ + + K IG + +D Sbjct: 180 TEEYHKRLKRNSSGDKPRSNL-NPKDTIGLRQDD 212 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,889,401 Number of Sequences: 59808 Number of extensions: 535514 Number of successful extensions: 1548 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1533 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1705624125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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