Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00758
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.30 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   0.69 
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   1.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   6.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 522 KPMEDTIYADEDQDLSTLETADKEEDKDKSNYD-SLEKLHDITVLEEDNIGDDE 680
           KP  + +  DED+D    +   K+  K+K   D  L K   I     D+I  +E
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIWTRNADDISQEE 297



 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEK 632
           D+D+D   +E   ++ED+D    D  +K
Sbjct: 239 DKDKDKPKIEDVGEDEDEDTKKEDKKKK 266



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/70 (20%), Positives = 29/70 (41%)
 Frame = +3

Query: 546 ADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDWY 725
           +D++ +    E   +++DKDK   + + +  D    +ED            +D E     
Sbjct: 224 SDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTK 283

Query: 726 PDFDKRADKV 755
           P + + AD +
Sbjct: 284 PIWTRNADDI 293


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +3

Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 719
           D+D D    ++ D+E+D++    D+   +H   +  E N G D D  D+ DD    D
Sbjct: 157 DDDDDALVSDSDDREKDEEDKRDDT--DMHG-RIKSERN-GKDLDDDDMNDDDRKDD 209


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 654 EEDNIGDDEDMLDVADDPESGD 719
           ++DNI D ED  D   D + GD
Sbjct: 229 DDDNISDPEDDDDKDQDMDEGD 250


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 296 PPYCLSKSPPIKFL 255
           PPY   +SPP+ FL
Sbjct: 442 PPYLFFESPPVVFL 455


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 296 PPYCLSKSPPIKFL 255
           PPY   +SPP+ FL
Sbjct: 442 PPYLFFESPPVVFL 455


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 296 PPYCLSKSPPIKFL 255
           PPY   +SPP+ FL
Sbjct: 442 PPYLFFESPPVVFL 455


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 296 PPYCLSKSPPIKFL 255
           PPY   +SPP+ FL
Sbjct: 442 PPYLFFESPPVVFL 455


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 499 NNKPSTTSNLW 531
           NN+PST++N W
Sbjct: 366 NNQPSTSNNRW 376


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 93  QKKCWCDKTDAVEC 52
           ++K WCD  + V+C
Sbjct: 462 EEKLWCDYPEVVKC 475


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -1

Query: 172 HCVNTAPANGRCHC 131
           HCVN      RC C
Sbjct: 43  HCVNLPGVGHRCQC 56


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 612 NYDSLEKLHDITVLEEDN 665
           ++ S  + H I +LEEDN
Sbjct: 229 SFSSPRRRHSINLLEEDN 246


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 767 CSIHHFISTLVEI 729
           C++HH +S LV++
Sbjct: 506 CALHHHLSKLVKL 518


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 767  CSIHHFISTLVE 732
            CS+HH +S L++
Sbjct: 1305 CSLHHHLSKLIK 1316


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 767 CSIHHFISTLVEI 729
           C++HH +S LV++
Sbjct: 231 CALHHHLSKLVKL 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,852
Number of Sequences: 336
Number of extensions: 3620
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)