Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00758
(793 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 37 0.004
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 33 0.062
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 32 0.082
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 31 0.14
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 31 0.19
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 29 0.58
SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subun... 28 1.3
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 28 1.3
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.3
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 1.8
SPAC1687.12c |coq4||ubiquinone biosynthesis protein Coq4|Schizos... 28 1.8
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 2.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.3
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 27 3.1
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 4.1
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 4.1
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 26 7.1
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 26 7.1
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 26 7.1
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 26 7.1
SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosacchar... 26 7.1
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 9.4
SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase Pp... 25 9.4
SPAC959.04c |||mannosyltransferase |Schizosaccharomyces pombe|ch... 25 9.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 25 9.4
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 36.7 bits (81), Expect = 0.004
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Frame = +3
Query: 498 QQQTFNDFKPMEDTIYADEDQDLSTLETADKEE----DKDKSNYDSLEKLHDITVLEE-- 659
Q Q F+D + M + DE++DL L A+K++ D+D+S + + ++ + E+
Sbjct: 4303 QSQAFDDSEFMH--VKEDEEEDLQALGNAEKDQIKSIDRDESANQNPDSMNSTNIAEDEA 4360
Query: 660 DNIGDD--EDMLDVADDPESGD 719
D +GD +D D++D ++G+
Sbjct: 4361 DEVGDKQLQDGQDISDIKQTGE 4382
Score = 29.9 bits (64), Expect = 0.44
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +3
Query: 516 DFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI-TVLEEDNIGDD----E 680
D K E +D DL ++ +E+K++++ + E + D LEE+N D+ +
Sbjct: 4089 DLKLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQD 4148
Query: 681 DMLDVADDPE 710
D D+A+D E
Sbjct: 4149 DFSDLAEDDE 4158
Score = 27.9 bits (59), Expect = 1.8
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +3
Query: 465 VGKCEIT*PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI 644
VG +IT + + EDT DL E + E D + DS+ ++
Sbjct: 3918 VGAEDITNTLNEDDDLEELANEEDTA---NQSDLDESEARELESDMNGVTKDSVVSENEN 3974
Query: 645 TVLEEDNIGDDEDMLDVADD 704
+ EE+N DE++ D+ +D
Sbjct: 3975 SDSEEENQDLDEEVNDIPED 3994
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 32.7 bits (71), Expect = 0.062
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 513 NDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDED 683
N+ P A E + D ++ DK ++ K D++VLEED+ +DED
Sbjct: 217 NNAAPPPPLAQAQEQLSTENEDEFDIDDTTDKMTTFTMNKFADLSVLEEDDDDEDED 273
Score = 28.7 bits (61), Expect = 1.0
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Frame = +3
Query: 393 NREGDPHSPLTERNR*SYCKHDCDVGKCEIT*PKIQQQTFNDFKPM----EDTIYADEDQ 560
N P PL + +++ D + T K+ T N F + ED DED+
Sbjct: 216 NNNAAPPPPLAQAQEQLSTENE-DEFDIDDTTDKMTTFTMNKFADLSVLEEDDDDEDEDE 274
Query: 561 DLSTLETADKEEDKD---KSNYDSLE-----KLHDITVLEEDNIGDDED 683
+L E ++EE+K+ SNYD E L D LE D DD D
Sbjct: 275 ELEG-EKEEEEEEKEKPEISNYDETEGKVNFSLEDSESLEFDEGSDDYD 322
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +3
Query: 612 NYDSLEKLHDITVLEEDNIGDDEDML---DVADDPE 710
N DSL + D +LEED D+E++L D +DD E
Sbjct: 333 NTDSLAEDED-DILEEDEDEDEEELLAIFDASDDSE 367
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 32.3 bits (70), Expect = 0.082
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 525 PMEDTIYADED---QDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDV 695
P + TI ED ++ + DK+ED+D N + E+ D EE++ DDE+ D
Sbjct: 69 PNDTTINKGEDGNENEVDNVNNNDKKEDED--NVEENEEEADANEEEEEDEEDDEE--DE 124
Query: 696 ADDPESG 716
D+ ESG
Sbjct: 125 EDEDESG 131
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 31.5 bits (68), Expect = 0.14
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +3
Query: 498 QQQTFNDFKPMEDTIYADEDQDLSTLE----TADKEEDKDKSNYDSLEKLHDITVLEEDN 665
QQ+ + FKP+E + D D D L+ D EE +++ +D L +++ +E++N
Sbjct: 99 QQEIQDTFKPVEANLAYDVDTDSEDLDEESVVKDTEEIIEQAQHD--VSLRNLSGIEDEN 156
Query: 666 IGDD 677
I DD
Sbjct: 157 IIDD 160
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 31.1 bits (67), Expect = 0.19
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 498 QQQTFNDFKPMEDT-IYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGD 674
+ +T +D + E+ +ADE D E +EED S +DS E+ H++ + D+ GD
Sbjct: 74 EAETLSDLEHDEEPQTFADEFIDDEAKECEGEEED---SVFDSDEE-HEVKPMFSDDSGD 129
Query: 675 DEDM 686
+ED+
Sbjct: 130 EEDL 133
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/63 (20%), Positives = 32/63 (50%)
Frame = +3
Query: 489 PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNI 668
PK+ + F D + + E+Q + +E + ++D++ +N K +D + + D++
Sbjct: 1365 PKVIRVGFGDSISVHAKEFTLEEQMIKQMELTNLKKDQEANNSSDTRKKYDSIIKKRDSL 1424
Query: 669 GDD 677
+D
Sbjct: 1425 RED 1427
>SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subunit
Rpc31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 570 TLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVAD---DPESGDWYPDFD 737
T++ D +++ ++ + ++E+ D + EED D+D D + D GD Y D+D
Sbjct: 144 TIKAQDLKDESSEAAHPNIEEEPDEGLEEEDEDFGDDDDNDYGENYFDNGEGDDYDDYD 202
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 513 NDFKPMEDTIYAD-EDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDML 689
+ + +D +Y D D + + ++D+ S +S E+ D+ EE+ DD++
Sbjct: 206 SQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYERDEDVDEEEEE---DDDENN 262
Query: 690 DVADDPESGD 719
D DD + +
Sbjct: 263 DEGDDEDENE 272
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 501 QQTFNDFKPMEDTIYADEDQDLSTLET----ADKEEDKDKSNYDSLEKLHDITVLEEDNI 668
++ +NDF+ I + + TL+ A+K+E+ + ++ D +++DI EE +
Sbjct: 91 EEEWNDFQNEIGIIEENAVEQEITLQQQQLLAEKDEENEIADNDLEPEVYDILYEEESKL 150
Query: 669 GDDEDML 689
G+ D++
Sbjct: 151 GESRDLI 157
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 420 LTERNR*SYCKHDCDVGKCEIT*PKIQQQTFNDFKPMEDTIYADE 554
+T++ R Y K + + +I +I+ + F+D+KP D Y DE
Sbjct: 559 MTQKEREQYAKKENERWDKKIA--EIELEQFHDYKPQVDIKYVDE 601
>SPAC1687.12c |coq4||ubiquinone biosynthesis protein
Coq4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 475 VKLLNQKYNNKPSTTSNLWRILYTLTKTKI*AP*KLPIRKKTRI 606
V L++K+ KPS SN R+L+T + K+ P +P+ RI
Sbjct: 17 VMSLSKKFL-KPSVASNQLRLLFTAAERKVNYPGHVPLSPLQRI 59
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 489 PK-IQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEK 632
PK + QQT +F E + ++ + + ST E+ D+E D D S + EK
Sbjct: 662 PKFVGQQTLEEFYASETSESSEGEYETSTSESEDEETD-DTSQEEDNEK 709
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 528 MEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDE--DMLDVAD 701
+E T+ DE+ S E D +E K +EK+ T +E I + + D LD+ D
Sbjct: 161 LETTLKGDENYSSSQKEIYDNDETIPKPPSPEVEKIETSTSVENAYITNSQYNDTLDMED 220
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 528 MEDTIYADEDQDLS--TLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLD 692
M D + +E+ LS ++ E+DK S+Y+ L D+ L D DD D D
Sbjct: 11 MNDANFKEENAHLSDASIHFGSSEQDKTPSDYE----LDDVLDLYNDTTEDDADDAD 63
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +3
Query: 534 DTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHD-ITVLEEDNIG---DDEDMLDVAD 701
D + +DED D ST + ++ K+ + + E +H + +DN+ D M +
Sbjct: 407 DLVMSDEDDDDSTFSDKNSKDFKETEDMNGAEDMHGRAPQITKDNLNLTTTDSPMSEA-- 464
Query: 702 DPESGDWYPD 731
+P S + Y D
Sbjct: 465 EPVSEEEYKD 474
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 507 TFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLE 629
++ D+ +D +ED + D +D D S+ DSLE
Sbjct: 306 SYPDYAVKQDETVVEEDGSSGEGDWEDVSDDSDNSSLDSLE 346
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 609 SNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPES 713
++Y D TV+EED + D DV+DD ++
Sbjct: 305 TSYPDYAVKQDETVVEEDGSSGEGDWEDVSDDSDN 339
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 495 IQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDK--DKSNYDSLEKLHDITVLEEDNI 668
+ + + D E I +E Q + + A D D N++ + +EE +
Sbjct: 128 VDESSAEDVSGDEAEIMNEEGQQIEQKKDAFGLNDGFFDIDNFNKQTLALEEEAVEEGVL 187
Query: 669 GDDEDMLDVADDPE 710
GD++D +D+ DP+
Sbjct: 188 GDEDDGIDLLMDPD 201
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 585 DKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADD 704
+ +D NY+ + + I +NI + +DM DV+DD
Sbjct: 61 ENSNPQDGPNYEDFDFMGSIHKEFGNNINEMDDMEDVSDD 100
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 25.8 bits (54), Expect = 7.1
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 597 DKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDV--ADDPESGDW-YPDFDKR 743
DKD S Y K D + + D+E L V AD SG + Y DF +R
Sbjct: 88 DKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQR 139
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 534 DTIYADEDQDLSTLETADKEEDKDKSNYDSLEKL 635
DT+ + + D T +T++K+E ++ + LEKL
Sbjct: 64 DTMEDENENDEDTEQTSEKKETEETPKENPLEKL 97
>SPAPB1A10.07c |||sphingolipid biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 540 IYADE-DQDLST-LETADKEEDKDKSNYD 620
+YAD D +ST LE EEDK +S+Y+
Sbjct: 337 LYADSHDMGVSTPLEDGSSEEDKHQSDYN 365
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 603 DKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDWYP 728
D + + LEK + V E+ NI D +L P S ++YP
Sbjct: 763 DPNRHRVLEKGTEKVVPEQKNIPPDISLLMSGIGPSSDEYYP 804
>SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase
Ppk34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 528 MEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNI 668
+E + + D D ST+E + ++K Y ++L + VL+ +N+
Sbjct: 87 LEKELGSFNDMDSSTIEDQIRNQEKKDPYYYIRKELDVLKVLDHENV 133
>SPAC959.04c |||mannosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 298
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 175 HHCVNTAPANGRCHC 131
H+C T P GRC C
Sbjct: 283 HYCPETIPYTGRCAC 297
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 489 PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNY 617
P+ + FN + +D IY D + +LET K+ +D Y
Sbjct: 14 PQTLRSKFNVGEITKDPIYEDAGRRFKSLETEAKKLAEDAKKY 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,974,345
Number of Sequences: 5004
Number of extensions: 60409
Number of successful extensions: 245
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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