Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00758
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       33   0.013
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.0  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   2.7  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   2.7  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   2.7  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   4.7  

>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 32.7 bits (71), Expect = 0.013
 Identities = 20/85 (23%), Positives = 40/85 (47%)
 Frame = +3

Query: 465 VGKCEIT*PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI 644
           + + + T P+I +  F+D  P +D    D+D D    +  D+ E +++ + D        
Sbjct: 77  INRSKKTNPQIVEYEFDDDLPFDDDSDFDDDSDFDD-DVGDRLESEEEDSTDE------- 128

Query: 645 TVLEEDNIGDDEDMLDVADDPESGD 719
           T++EE+    D  M D  ++ +  D
Sbjct: 129 TLIEEELTDTDSSMCDSTNEDDGDD 153


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +3

Query: 540 IYADEDQDLSTLETADKEEDKDKSNYDSLEKL-HDITVLE----------EDNIGDDEDM 686
           I  D   D  +L T +KEE  +    +  EKL H+ T  E          +DN+  D D 
Sbjct: 713 IAVDNLADADSLTTVEKEEGDNPDGEE--EKLSHEPTPTEHGDDGFMDHDKDNLDSDNDP 770

Query: 687 LDVADDPESGD 719
           ++++DD +  D
Sbjct: 771 MNISDDYDGQD 781


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 19/85 (22%), Positives = 39/85 (45%)
 Frame = +3

Query: 465 VGKCEIT*PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI 644
           + + + T P+I +  F+D  P +D   +D D D+     +++E+  D+            
Sbjct: 307 INRSKKTNPQIVEYEFDDDFPFDDD--SDFDDDVGDRLESEEEDSTDE------------ 352

Query: 645 TVLEEDNIGDDEDMLDVADDPESGD 719
           T++EE+    D  M D  ++ +  D
Sbjct: 353 TLIEEELTDTDSSMCDSTNEDDGDD 377


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 19/85 (22%), Positives = 39/85 (45%)
 Frame = +3

Query: 465 VGKCEIT*PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI 644
           + + + T P+I +  F+D  P +D   +D D D+     +++E+  D+            
Sbjct: 77  INRSKKTNPQIVEYEFDDDFPFDDD--SDFDDDVGDRLESEEEDSTDE------------ 122

Query: 645 TVLEEDNIGDDEDMLDVADDPESGD 719
           T++EE+    D  M D  ++ +  D
Sbjct: 123 TLIEEELTDTDSSMCDSTNEDDGDD 147


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 19/85 (22%), Positives = 39/85 (45%)
 Frame = +3

Query: 465 VGKCEIT*PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI 644
           + + + T P+I +  F+D  P +D   +D D D+     +++E+  D+            
Sbjct: 77  INRSKKTNPQIVEYEFDDDFPFDDD--SDFDDDVGDRLESEEEDSTDE------------ 122

Query: 645 TVLEEDNIGDDEDMLDVADDPESGD 719
           T++EE+    D  M D  ++ +  D
Sbjct: 123 TLIEEELTDTDSSMCDSTNEDDGDD 147


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/52 (21%), Positives = 29/52 (55%)
 Frame = -2

Query: 288 LPLKITTHQVLDASFTSFMVSFCVYIVIGSGMSACFSAITVLTLHPRTVDVT 133
           +PL++     + ++  S  +++ + +++ +G S C +A T +  +P  V+ T
Sbjct: 111 IPLRLCPRISIASAHPSAEMNWSIVLIVAAGCSIC-AAQTTVKRYPTGVNAT 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,133
Number of Sequences: 2352
Number of extensions: 15830
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)