Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00758
(793 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60130.1 68418.m07538 transcriptional factor B3 family protei... 38 0.006
At5g63740.1 68418.m08000 zinc finger protein-related 38 0.010
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 36 0.031
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 36 0.031
At3g49140.1 68416.m05370 pentatricopeptide (PPR) repeat-containi... 35 0.054
At2g22080.1 68415.m02622 expressed protein 35 0.071
At3g50550.1 68416.m05528 expressed protein isoform contains a n... 34 0.094
At1g29220.1 68414.m03574 transcriptional regulator family protei... 34 0.12
At5g07170.1 68418.m00817 hypothetical protein 33 0.29
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 33 0.29
At1g49920.1 68414.m05598 zinc finger protein-related weak simila... 32 0.38
At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative simila... 32 0.50
At4g30830.1 68417.m04373 expressed protein weak similarity to M ... 31 0.66
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 31 1.2
At4g33740.2 68417.m04791 expressed protein 31 1.2
At4g33740.1 68417.m04790 expressed protein 31 1.2
At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family... 30 1.5
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui... 30 2.0
At4g13320.1 68417.m02082 expressed protein 30 2.0
At5g52910.1 68418.m06566 timeless family protein contains Pfam d... 29 2.7
At5g24060.1 68418.m02826 expressed protein strong similarity to ... 29 2.7
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 29 2.7
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ... 29 2.7
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 29 2.7
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 29 2.7
At4g24200.1 68417.m03474 expressed protein hypothetical protein ... 29 3.5
At4g02300.1 68417.m00311 pectinesterase family protein contains ... 29 3.5
At3g59020.1 68416.m06578 importin beta-2 subunit family protein ... 29 3.5
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf... 29 3.5
At1g48400.1 68414.m05406 F-box family protein contains F-box dom... 29 3.5
At1g17690.1 68414.m02190 expressed protein 29 3.5
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 29 4.7
At4g12740.1 68417.m02001 adenine-DNA glycosylase-related / MYH-r... 29 4.7
At2g19670.1 68415.m02299 protein arginine N-methyltransferase, p... 29 4.7
At1g60170.1 68414.m06778 pre-mRNA processing ribonucleoprotein b... 29 4.7
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 28 6.2
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 28 6.2
At3g01160.1 68416.m00020 expressed protein 28 6.2
At1g69070.1 68414.m07903 expressed protein 28 6.2
At5g66540.1 68418.m08389 expressed protein ; supported by full-L... 28 8.2
At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin (... 28 8.2
At5g49770.1 68418.m06164 leucine-rich repeat transmembrane prote... 28 8.2
At4g19160.3 68417.m02827 expressed protein 28 8.2
At4g19160.2 68417.m02826 expressed protein 28 8.2
At4g19160.1 68417.m02828 expressed protein 28 8.2
At3g14740.2 68416.m01864 PHD finger family protein similar to zi... 28 8.2
At3g14740.1 68416.m01863 PHD finger family protein similar to zi... 28 8.2
At2g34100.1 68415.m04175 expressed protein similar to the Asp-r... 28 8.2
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 28 8.2
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 28 8.2
At1g47970.1 68414.m05343 expressed protein 28 8.2
>At5g60130.1 68418.m07538 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 300
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 492 KIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIG 671
K++ + + +D + DED D S ED D +Y + V ++DN
Sbjct: 101 KVESDSDEQNQASDDVLSLDEDDDDSDYNCG---EDNDSDDYAD-----EAAVEKDDNDA 152
Query: 672 DDEDMLDVADD--PESGDWYPDFDKR 743
DDED+ +VADD E D+ FD R
Sbjct: 153 DDEDVDNVADDVPVEDDDYVEAFDSR 178
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 719
DED+D E D++ED+D + D + D ++D DDED + DD + D
Sbjct: 72 DEDEDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDD 128
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +3
Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDWYP 728
DED+D D++ED+D+ + D + D + D+ DD+D D D+ + D
Sbjct: 70 DEDEDEDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDD 129
Query: 729 DFDKRAD 749
+ D+ D
Sbjct: 130 ENDEECD 136
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEE--DNIGDDEDMLDVADDPESGDW 722
DED D E D++ED D + D + D +E D+ DDED D DD + D
Sbjct: 74 DEDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDE 133
Query: 723 YPDFDKRADKVMN*TWCIY 779
D + + ++++ +C +
Sbjct: 134 ECDDEYDSHRLISTPYCTH 152
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 546 ADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDWY 725
AD D+D E D ++D D + D + D ++++ +DED D DD +
Sbjct: 77 ADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDEECD 136
Query: 726 PDFD 737
++D
Sbjct: 137 DEYD 140
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 540 IYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 719
+Y D + D D + D+D+ ++ D E+D+ DD+D D ADD + +
Sbjct: 51 VYDDHNNDGEGDGDGDGDGDEDEDEDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDE 110
Query: 720 WYPDFDKRADK 752
D D D+
Sbjct: 111 DDDDEDDDEDE 121
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 531 EDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDE 680
ED D+D D + AD +ED D + D E D E D DDE
Sbjct: 89 EDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDEECDDE 138
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 489 PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI 644
P ++ +T + +P + D D L ET + + D +KSN++S+E ++
Sbjct: 841 PAVEVKTSSTEEPENTNVSGDNDSTLDKQETKESDNDNNKSNHESIEGASEV 892
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 489 PKIQQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI 644
P ++ +T + +P + D D L ET + + D +KSN++S+E ++
Sbjct: 841 PAVEVKTSSTEEPENTNVSGDNDSTLDKQETKESDNDNNKSNHESIEGASEV 892
>At3g49140.1 68416.m05370 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1229
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 528 MEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDP 707
+ D+ + ED + ++ D ED+D+ + ++ L D ++D+ DDED D D
Sbjct: 934 LSDSDFETEDDESGDDDSEDTGEDEDEEEWVAI--LEDEDEDDDDDDDDDEDDDDSDSDE 991
Query: 708 ESGDW 722
GDW
Sbjct: 992 SLGDW 996
>At2g22080.1 68415.m02622 expressed protein
Length = 177
Score = 34.7 bits (76), Expect = 0.071
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 513 NDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLD 692
ND +P D DED D + D+EED+D+++ E + +EE+ +DED +
Sbjct: 108 NDDEPEGDDGNDDEDDDNHENDDEDEEEDEDENDDGGEEDDDEDAEVEEEEEEEDEDDEE 167
Query: 693 VADDPE 710
P+
Sbjct: 168 ALQPPK 173
>At3g50550.1 68416.m05528 expressed protein isoform contains a
non-consensus AT donor site at intron 1
Length = 95
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 719
D+D D + + D+EED++ S DS D T D+ DDE+ D ++ E D
Sbjct: 24 DDDTDGESSDEDDEEEDRNLSGDDSESSEDDYTDSNSDSDDDDEEDDDDEEEEEEED 80
>At1g29220.1 68414.m03574 transcriptional regulator family protein
similar to Transcriptional regulator protein HCNGP
(Swiss-Prot:Q02614) [Mus musculus]
Length = 351
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +3
Query: 537 TIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDED 683
++Y+DED + ++EED+ + N + EK+ + +EE N D+E+
Sbjct: 13 SVYSDEDDEEMEDAEEEEEEDEKQRNQEESEKIIEEDQVEEANYMDEEE 61
>At5g07170.1 68418.m00817 hypothetical protein
Length = 542
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 540 IYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 719
I + +D L ++D+E+D + ++ + + D T +ED+ DD+D D DD + D
Sbjct: 78 IPSSQDDPLIDDSSSDEEDDSESTHCYAADDDADDTDDDEDDDDDDDDDDDDDDDDDDDD 137
Query: 720 WYPDFDKRAD 749
D D+ D
Sbjct: 138 DDDDDDESKD 147
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 534 DTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVL-EEDNIGDDEDMLDVADDPE 710
D Y D+D D S E++++ D D S+ + D+ + ++DN D+D D DD
Sbjct: 406 DGYYVDDDDD-SDDESSEESSDDDDSSEEEENGEVDVEITKDDDNDHGDDDDDDDEDDDG 464
Query: 711 SGD 719
GD
Sbjct: 465 DGD 467
>At1g49920.1 68414.m05598 zinc finger protein-related weak
similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea
mays] GI:1857256; contains Pfam profiles PF03108: MuDR
family transposase, PF04434: SWIM zinc finger
Length = 785
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 588 KEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDW 722
KE+D + + + E D E+D++ DDE+ D DD E +W
Sbjct: 741 KEKDTEDDHLEEDEDGDDDEEEEDDDVDDDEEDDDDVDDDEDDEW 785
>At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative similar
to SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1171
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 501 QQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDE 680
+ T N P + +Y +ED + E +++ED D D + + D + D+ DDE
Sbjct: 49 KSTLNSLSPSQSQLYEEEDDE----EEEEEDEDDDDEAADEYDNISD-EIRNSDDDDDDE 103
Query: 681 D 683
+
Sbjct: 104 E 104
>At4g30830.1 68417.m04373 expressed protein weak similarity to M
protein type 1 [Streptococcus pyogenes] GI:311758;
contains Pfam profile PF04576: Protein of unknown
function, DUF593
Length = 363
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 510 FNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNI 668
FND K ++ + D+DQD + L+ D D+S S E + D+++ EE +
Sbjct: 119 FNDLKSLDVKLQEDDDQDENMLKMNDFSL-SDRSQTPSPELVTDLSIPEEKEV 170
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 489 PKIQQQTFNDFKPMEDT-IYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDN 665
PK + N P ED D+D D S +++D ++D + S + EK+ + EED+
Sbjct: 111 PKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSD-DDDSENSGDEEEEKVTAESDSEEDD 169
Query: 666 IGDDED 683
DDE+
Sbjct: 170 SSDDEE 175
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 531 EDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPE 710
E+ + DE+++++ D EEDK+K + E+ + EED I D++D A D +
Sbjct: 116 EEEVEKDEEEEVAE----DDEEDKNKQGEEVAEEDEEENKHEEDEI-DEQDQSKNAGDTD 170
Query: 711 SGD 719
D
Sbjct: 171 KDD 173
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 531 EDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPE 710
E+ + DE+++++ D EEDK+K + E+ + EED I D++D A D +
Sbjct: 116 EEEVEKDEEEEVAE----DDEEDKNKQGEEVAEEDEEENKHEEDEI-DEQDQSKNAGDTD 170
Query: 711 SGD 719
D
Sbjct: 171 KDD 173
>At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 1338
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 531 EDTIYADEDQDLSTLETADKEEDKDKSNYDSL--EKLHDITVLEEDNIGDDEDMLDVADD 704
+D + + E+ + +++ +++ E +K + DS E + D D DM+D +D
Sbjct: 998 KDNLISSENVEYKSMDLSEQMEVDEKDDVDSKYSESITDEVAAFGTPASGDRDMVDFSDK 1057
Query: 705 PESGDWYPDFDKRAD 749
E+G D + A+
Sbjct: 1058 TENGSKEADHSETAE 1072
>At4g38600.2 68417.m05463 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1794
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 546 ADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDE--DMLDVADD 704
A D+ T A K D++ S + D V+EED+I DDE D DV DD
Sbjct: 971 AQADKGPQTRSNAQKRADEELEI--SPVDIDDALVIEEDDISDDEDDDNEDVLDD 1023
>At4g13320.1 68417.m02082 expressed protein
Length = 216
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 519 FKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVL--EEDNIGDDEDMLD 692
F+ ME T+ + +D +T E++ N ++ + +L +EDN D+
Sbjct: 22 FEEMEQTLIRIQQEDTATNESSQWRPQPTDWNARNMTPIEVSAILLHQEDNHHHDQQTQQ 81
Query: 693 VADDPESG--DWYPDFDKRADKVMN*TWC 773
+ + + DW PDF R V+N C
Sbjct: 82 GSSNTITNFFDWKPDFVFRTQCVINDEAC 110
>At5g52910.1 68418.m06566 timeless family protein contains Pfam
domains PF05029: Timeless protein C terminal region and
PF04821: Timeless protein
Length = 1141
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESG 716
D DQ T E+ E D S+ L + L DN +D+++ D DD +G
Sbjct: 1061 DNDQSYITRESRQSETDVHISDNGPSTSLPEDPNLSSDNELEDDELADWGDDSAAG 1116
>At5g24060.1 68418.m02826 expressed protein strong similarity to
unknown protein (emb|CAB61996.1); expression supported
by MPSS
Length = 464
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +3
Query: 564 LSTLETADKE-EDKDKSNYDSLEKLHD---ITVLEEDNIGDDEDMLDVADDPES-GDW 722
+ +E + E ED++K + D E D + VLE+ GDDED V+D ES GDW
Sbjct: 176 IEEIEDGESEVEDENKGDEDEGEDKDDEEWVAVLED---GDDEDNY-VSDSDESLGDW 229
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 555 DQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDE--DMLDVADD 704
D+D + +D+ S + D V+EED+I DDE D DV DD
Sbjct: 1063 DKDTQMKPASGDSSSEDEELEISPVDIDDALVIEEDDISDDEDDDNEDVLDD 1114
>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
similar to SP|Q92973 Importin beta-2 subunit
(Transportin) {Homo sapiens}; contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 891
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 528 MEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDED 683
+E+ YAD+D+ L E + + D+D+ D + H + ++ DD+D
Sbjct: 312 LENMAYADDDESLLDAEEDESQPDRDQ---DLKPRFHTSRLHGSEDFDDDDD 360
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = +3
Query: 543 YADEDQDLSTLETADKEEDKD-KSNYDSLEKLHDITVLEEDNIGDD-EDMLDVA--DDPE 710
Y D++++ +T++ ++ ED+D +NY+ +++ T E+ + DD D+L A +DP+
Sbjct: 733 YEDDEEEAATMDDHNEVEDEDANTNYNREDEM--TTQEAEEPVDDDAHDLLAAAGLEDPD 790
Query: 711 SGD 719
D
Sbjct: 791 VDD 793
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = +3
Query: 543 YADEDQDLSTLETADKEEDKD-KSNYDSLEKLHDITVLEEDNIGDD-EDMLDVA--DDPE 710
Y D++++ +T++ ++ ED+D +NY+ +++ T E+ + DD D+L A +DP+
Sbjct: 945 YEDDEEEAATMDDHNEVEDEDANTNYNREDEM--TTQEAEEPVDDDAHDLLAAAGLEDPD 1002
Query: 711 SGD 719
D
Sbjct: 1003 VDD 1005
>At4g24200.1 68417.m03474 expressed protein hypothetical protein -
Arabidopsis thaliana,PIR2:T06677
Length = 1000
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 654 EEDNIGDDEDMLDVADD-PESGD 719
EE ++GDD D++D DD PESGD
Sbjct: 540 EEPHVGDD-DLMDEKDDKPESGD 561
>At4g02300.1 68417.m00311 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 532
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 510 FNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDML 689
FND + + +D L T+D E + D + Y+ E L +I + +N+ + ML
Sbjct: 122 FNDISMLLTNVMTYQDTCLDGFSTSDNENNNDMT-YELPENLKEIILDISNNLSNSLHML 180
Query: 690 DV 695
V
Sbjct: 181 QV 182
>At3g59020.1 68416.m06578 importin beta-2 subunit family protein
similar to D-Importin 7/RanBP7 [Drosophila melanogaster]
GI:7542336; contains Pfam profile PF03810: Importin-beta
N-terminal domain
Length = 1112
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +3
Query: 552 EDQDLSTLETADKEEDKDKSNYDSLE--KLHDITVLEED--NIGDDEDML--DVADDPE 710
+D D+ +T D++ED D N D + L + +D + DD+D D +DD E
Sbjct: 981 DDDDMDEFQTDDEDEDGDDENPDETDGSTLRKLAAQAKDFRSYSDDDDFSDDDFSDDEE 1039
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 519 FKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDED 683
F+ + + + A +DQ + ++EED+D + D E D +ED GDDE+
Sbjct: 951 FRALLELLVAYKDQLAEAAKAEEEEEDEDGDDDDMDEFQTD----DEDEDGDDEN 1001
>At3g27720.1 68416.m03461 zinc finger protein-related contains
Pfam:PF01485 IBR domain
Length = 493
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +3
Query: 537 TIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESG 716
++Y D+ +D+ A++EE +DK + E EE+ G+DE+ + +D E+
Sbjct: 72 SVYTDQGKDV-LFSRAEEEEGEDKEEEEGGEDE------EEEEGGEDEEAEEGGEDEEAE 124
Query: 717 DWYPDFDKRADK 752
+ D ++ D+
Sbjct: 125 EGVEDEEEEEDE 136
>At1g48400.1 68414.m05406 F-box family protein contains F-box domain
Pfam:PF00646
Length = 513
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 564 LSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDWY 725
+ST + ++D D + D + D ++D+ DD+D D DD + GD+Y
Sbjct: 276 VSTNDYDYSDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGDYY 329
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 498 QQQTFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEK---LHDITVLEEDNI 668
+++ +D + ED DE+++ + + + + + DKS D E L D T + DN
Sbjct: 87 EEEGKSDTEEDEDDEDEDEEENSGSDDLSSTDGEDDKSQGDDQETLGGLTDDTQEDNDNQ 146
Query: 669 GDDEDMLDVADDPE 710
++ED D D E
Sbjct: 147 SEEEDPDDYETDEE 160
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 585 DKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGD 719
DK++D +K + D + H+ +D+ DD+D D DD + D
Sbjct: 107 DKDDDDEKKHKDKKKDGHNDDDDSDDDTDDDDDDDDDDDDDDEVD 151
>At4g12740.1 68417.m02001 adenine-DNA glycosylase-related /
MYH-related similar to MYH (GI:18845094) [Rattus
norvegicus]; similar to adenine-DNA glycosylase
(GI:12656850) [Mus musculus]; contains TIGRFAM profile
TIGR01084: A/G-specific adenine glycosylase (hits below
the trusted cutoff)
Length = 630
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +3
Query: 546 ADEDQDLSTLET-ADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESG-- 716
A+E++ E ADKEE +++S + E+ + EE GD ED+ + +
Sbjct: 75 AEEEEKAEEAEAEADKEEAEEESEEEEEEEEEEAEAEEEALGGDIEDLFSENETQKIRMG 134
Query: 717 --DWYPDFDKR 743
DWY D +KR
Sbjct: 135 LLDWY-DVNKR 144
>At2g19670.1 68415.m02299 protein arginine N-methyltransferase,
putative similar to protein arginine N-methyltransferase
1-variant 1 [Homo sapiens] GI:7453577
Length = 366
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 591 EEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDWYPD 731
E + + S+ KLH E + GDD + DVADD S D+Y D
Sbjct: 5 ENNNNGSDETQTTKLHFEDADESMHDGDDNNA-DVADDITSADYYFD 50
>At1g60170.1 68414.m06778 pre-mRNA processing ribonucleoprotein
binding region-containing protein similar to U4/U6
snRNP-associated 61 kDa protein [Homo sapiens]
GI:18249847; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 485
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 549 DEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLD----VADDPE 710
D D D++ LET + ++ + S ++ DI E+ +G D D + + DDPE
Sbjct: 35 DVDMDMADLETLNYDDLDNVSKLQKSQRYADIMHKVEEALGKDSDGAEKGTVLEDDPE 92
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 534 DTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHD--ITVLEEDNIGDDEDMLDVADD 704
DT A+ + + E+ D+ EDK++ D E+ D EE N D ED + ++D
Sbjct: 227 DTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKEDEKEESND 285
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +3
Query: 522 KPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVAD 701
+P +D D+D ET D++ED ++ D L++ I L DN +D L D
Sbjct: 1732 RPTDDDSDPDDDD-----ETEDEDEDDEEE--DDLDR---ILGLAGDNSDSGDDDLSSED 1781
Query: 702 DPESGDWYPDFDKRAD 749
+ +S DFD+ AD
Sbjct: 1782 NEDS---VSDFDEEAD 1794
>At3g01160.1 68416.m00020 expressed protein
Length = 380
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 546 ADEDQDLST-LETADKEEDKDKSNYDSLEKLHDITV---LEEDNIGDDEDMLDVADDPES 713
+DE+ DL + K++DK K Y +L + D+ LEE+N D+DM +V +
Sbjct: 73 SDEEDDLGNEVINQSKKKDKKKDKYRALIEAEDVDSDKDLEEEN---DQDM-EVTFNTGL 128
Query: 714 GDWYPDFDKRADKVMN*TWCIYV 782
D + K+ D W Y+
Sbjct: 129 EDLSKEILKKKDNQSESVWETYL 151
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +3
Query: 534 DTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPES 713
D +DED+D +++EED D + EK LE+ DDE ++ D+ E
Sbjct: 355 DNSESDEDED----SESEEEEDDDGESDGGDEKQRKGHHLEDWEQSDDELGAELEDEEED 410
Query: 714 GDWYPDFDKRAD 749
D D ++ A+
Sbjct: 411 DDEEDDDEEDAE 422
>At5g66540.1 68418.m08389 expressed protein ; supported by
full-Length cDNA gi:12057175 from [Arabidopsis thaliana]
Length = 524
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 531 EDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEE 659
ED +ED++ E ++EE+KD N +K I LEE
Sbjct: 139 EDEEEEEEDEEEEEEEEEEEEEEKDGDNEGIEDKFFKIKELEE 181
>At5g65020.1 68418.m08179 annexin 2 (ANN2) identical to annexin
(AnnAt2) [Arabidopsis thaliana] GI:4959108
Length = 317
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 412 IARLRSEIDDLTANMIAMSANVKLLNQKYNNKPSTTSNLWRILYTLTKTKI 564
++ R E DD+ NM+ + K+L++K + K + + RIL T +K ++
Sbjct: 153 VSTFRYEGDDV--NMMLARSEAKILHEKVSEKSYSDDDFIRILTTRSKAQL 201
>At5g49770.1 68418.m06164 leucine-rich repeat transmembrane protein
kinase, putative
Length = 946
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -1
Query: 238 LHGFLLRVHRNRVWYECVLLGHHCVNTAPANGRCHC-Y*LRSIQFIRSSS 92
L G+ V N + G+HC N CHC Y L + +RS S
Sbjct: 405 LSGYCNAVQPNSTFSTLTKCGNHCGKGKEPNQGCHCVYPLTGVFTLRSPS 454
>At4g19160.3 68417.m02827 expressed protein
Length = 454
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 28 PHTSYVHSALNCVCLITPAFLL 93
P SY+HS LNC C + AFL+
Sbjct: 223 PENSYLHSVLNCRC--STAFLI 242
>At4g19160.2 68417.m02826 expressed protein
Length = 453
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 28 PHTSYVHSALNCVCLITPAFLL 93
P SY+HS LNC C + AFL+
Sbjct: 223 PENSYLHSVLNCRC--STAFLI 242
>At4g19160.1 68417.m02828 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 28 PHTSYVHSALNCVCLITPAFLL 93
P SY+HS LNC C + AFL+
Sbjct: 82 PENSYLHSVLNCRC--STAFLI 101
>At3g14740.2 68416.m01864 PHD finger family protein similar to
zinc-finger protein BR140 [PIR|JC2069][Homo sapiens];
contains PHD-finger domain PF00628
Length = 343
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 516 DFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEK-----LHDITVLEEDNI 668
++KP + ++ L+ + + EED DK N D L K L D V +ED I
Sbjct: 96 EYKPYVEEKSIEKKSTLNVESSLEVEEDDDKENIDPLGKGKALDLSDREVEDEDGI 151
>At3g14740.1 68416.m01863 PHD finger family protein similar to
zinc-finger protein BR140 [PIR|JC2069][Homo sapiens];
contains PHD-finger domain PF00628
Length = 341
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 516 DFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEK-----LHDITVLEEDNI 668
++KP + ++ L+ + + EED DK N D L K L D V +ED I
Sbjct: 96 EYKPYVEEKSIEKKSTLNVESSLEVEEDDDKENIDPLGKGKALDLSDREVEDEDGI 151
>At2g34100.1 68415.m04175 expressed protein similar to the Asp-rich
region of GP|1633572|U52064
Length = 345
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 654 EEDNIGDDEDMLDVADDPESGDWYPDFD 737
EEDN DDE+ +D+ + W DFD
Sbjct: 177 EEDN--DDEEDVDIFSEDSDDSWNEDFD 202
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +3
Query: 594 EDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVADDPESGDWYPDFDKRAD 749
ED ++K I ++ + DDE+ L++ + E DW + + D
Sbjct: 1771 EDGSSKMIQEIDKEESIEPVDRETSEDDEEELEIEFEDEEEDWEAEVIQETD 1822
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 522 KPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDED 683
K E+T +D + + + A+K+ ++++S E + ++DN GDD D
Sbjct: 345 KLAEETWGKHKDAEKAAFDEAEKKREEEESKDAPAESDAEEEAEDDDNEGDDSD 398
>At1g47970.1 68414.m05343 expressed protein
Length = 198
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +3
Query: 531 EDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI------TVLEEDNIGDDEDMLD 692
E+ D+D + D+EE++D + D ++ L + + +ED GD++ D
Sbjct: 36 EEVSDEDDDDGSEGDDDDDEEEEEDDDDDDDVQVLQSLGGPPVQSAEDEDEEGDEDGNGD 95
Query: 693 VADDPESGDWYPDFDKRADK 752
DD + GD D D D+
Sbjct: 96 --DDDDDGDDDDDDDDDEDE 113
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,635,635
Number of Sequences: 28952
Number of extensions: 323701
Number of successful extensions: 1475
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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