Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00757
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.049
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 33 0.22
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8) 32 0.52
SB_31237| Best HMM Match : Cathelicidins (HMM E-Value=0.58) 31 0.68
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 30 1.6
SB_36777| Best HMM Match : VWA (HMM E-Value=0) 30 1.6
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 30 2.1
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 29 2.8
SB_1121| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 29 2.8
SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0) 29 2.8
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 3.6
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 3.6
SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27) 29 3.6
SB_22052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 29 4.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 4.8
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_738| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 28 6.4
SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 6.4
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 28 6.4
SB_15403| Best HMM Match : CH (HMM E-Value=0) 28 6.4
SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03) 28 6.4
SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12) 28 8.4
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 28 8.4
SB_36903| Best HMM Match : p450 (HMM E-Value=0) 28 8.4
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 31.5 bits (68), Expect(2) = 0.049
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +2
Query: 80 SPIPPRLQIPGAIPVGGPVRQG---GFRQGRIAPVPG---SIPRVRRPGFARPSFKSVDA 241
S PPR +P P+GGPVR G + PVP PR RP A S +S
Sbjct: 336 SASPPRHTLPRPEPIGGPVRGSEPKGVARADAPPVPARTDQTPRPERPVPAGASPQSRRR 395
Query: 242 SPRP 253
P P
Sbjct: 396 RPVP 399
Score = 22.6 bits (46), Expect(2) = 0.049
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 338 RPAATLHPNLKMTSTTSPPLLSQNHP 415
RP T P + TTS PLL N P
Sbjct: 396 RPVPT--PRRTVHKTTSSPLLDPNQP 419
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 34.3 bits (75), Expect = 0.097
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 259 QSLDEPAKPVTEEPE---DEYEINT-PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 426
QSL E +K E E + +E++ P + +SS S PEP + P PP
Sbjct: 561 QSLGEASKHFEENDEVVVESFEVSLKPASATSSSRSPPEPFELRKALPKHESPSPPSRVP 620
Query: 427 PFPQSSPSP 453
P P+++P P
Sbjct: 621 PQPETAPKP 629
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 107 PGAIPVGGPVRQGGFRQGRIAP-VPGSIPRVRRPG 208
PG IP P R+ G R G I P VPG I RRPG
Sbjct: 517 PGGIPGRTPGRRPGGRPGNIPPFVPGLIIPSRRPG 551
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 INTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFP-QSSPSPVKLDPIRPTQ 483
+ TPT ++ +TP P T ++P P + P Q++P+P P PTQ
Sbjct: 10 LTTPTLTKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQ 66
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +1
Query: 256 LQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFP 435
LQ + P P++ P PT ++ +S P P Y QP+PP I P P
Sbjct: 904 LQPYNTPMPPISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY------QPQPPGIMQP-P 956
Query: 436 QSSPSPVKLDP 468
S P + P
Sbjct: 957 TSIPPSQPMAP 967
>SB_45600| Best HMM Match : LTXXQ (HMM E-Value=1.8)
Length = 355
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYD---ITTTSQPKPPIIFNPFPQSS 444
PA P T P + I P+ ++ G TP P F TT++P P + P P+
Sbjct: 226 PATPAT--PANGVPIAGPSGMATPGAFTPPPAPVFTPPPPYRTTAKPFPKMSLTPTPKKP 283
Query: 445 PSPVK 459
P P K
Sbjct: 284 PVPKK 288
>SB_31237| Best HMM Match : Cathelicidins (HMM E-Value=0.58)
Length = 562
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +1
Query: 229 IRGCLTSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK 408
IR T SN + PVT P +++ TPT+ S E + F +I + P
Sbjct: 59 IRDSTTQSNTSTATNELDPVTVSPVLTHQVMTPTSKERSVRKVWEKEKVFNEIVAMALPV 118
Query: 409 PPI 417
P +
Sbjct: 119 PNV 121
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 259 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQND-FYDITTTS 399
Q +++ K ++EPE E + +A + S PE D FYD+ TTS
Sbjct: 2122 QIVNKTPKQTSKEPEPEVSPKSESAEALKVTSAPEVTKDTFYDVNTTS 2169
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 525 EPINKPQ-PARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIRAPVRNTQQ 701
+P PQ P S +P RP +P+ +PF QP R PQ+P RA + TQQ
Sbjct: 481 QPGQSPQQPFLPDQQSQKPFRPEQQPQ-QPFRPGQQPQQPFRSVQPPQQPFRAD-QQTQQ 538
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 543 QPAR-IQPLSNRPQRPIFRPETK---PFVXXXXXIQPVRQYTRPQEPIRAPVRNTQ 698
QP R +QP PQ+P FR + + PF QP R +PQ+P RA +N Q
Sbjct: 518 QPFRSVQP----PQQP-FRADQQTQQPFQSGQQPHQPFRSVQQPQQPFRADQQNRQ 568
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 543 QPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIRAPVRNTQQ 701
QP+R +P RP +P+ +PF QP R + Q+P P + QQ
Sbjct: 588 QPSRPGQQHQQPFRPEQQPQ-QPFRSVQPPQQPFRADQQTQQPFHQPGQQPQQ 639
>SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1104
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +1
Query: 232 RGCLTSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPE-PQNDFYDITTTSQPK 408
RG L + S +E +P+T+ +TP A S SG PE P Y T Q K
Sbjct: 155 RGDLILKEIASDEEVERPITQRLHQPLAFSTP-ALSQSGLGNPETPDVSLYKTCETPQ-K 212
Query: 409 PPIIFNPFPQS 441
P N F S
Sbjct: 213 PLDKMNEFLHS 223
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = +3
Query: 387 HHHFSAKTTHNL*PVPTIFS*PCQARSHPSHAIQTVFTHTFNPIRNEPINKPQPARIQPL 566
H H A+ TH P + P R H T +THT+ P P + P
Sbjct: 742 HPHLHAQYTHAYTPSTHTLTRPVNPRLH------TQYTHTYTPGTPTPTQREYTHAYTPS 795
Query: 567 SNRPQRPI 590
+ P RP+
Sbjct: 796 TPTPTRPV 803
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 353 LHPNLKMTSTTSPPLLSQNHP*SLTRSHNLLLALSS*IPSVPRNTDRLHPHL 508
+HP L ST +P + HP SL + + PS P+ T +HPHL
Sbjct: 550 IHPRLNTPSTPTPT--RRVHP-SLHAQYTHAEYTHAYTPSTPKATRLVHPHL 598
>SB_36777| Best HMM Match : VWA (HMM E-Value=0)
Length = 1303
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 373 DFYDITTTSQPKPPIIFNPFPQSSPSPVKLDP 468
D D S P P ++ NP PQ +P+P P
Sbjct: 1247 DICDNLQVSTPSPSLVPNPVPQPAPAPAPAPP 1278
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +1
Query: 247 SSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYST-------PEPQNDFYDITTTSQP 405
SS+ + +P +T+ P IN PT + S Y P Q + +T P
Sbjct: 232 SSHQPNSHQPQLLLTQLPSTPAPIN-PTPINPSSYQPNSHPPQLPSTQLPSTQLPSTQLP 290
Query: 406 KPPIIFNPFPQSSPSPVKLDPIRPT 480
+ FP S+P+P+ PI PT
Sbjct: 291 STQLPSTQFP-STPAPINPTPINPT 314
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +2
Query: 101 QIPGAIPVGGPVRQGGFRQGRIAPVPGSIPRVRRPGFARPSFKSVDASPRPIFSHLM 271
++PGAI GG QGG QG PG P + + G P F PRP H M
Sbjct: 205 EMPGAIQPGGAPLQGGPPQGESHGQPGP-PALLQQGPPGPPF---HGEPRPPPHHDM 257
>SB_1121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 396 FSAKTTHNL*PVPTIFS*PCQARSHPSHAIQTVFTHTFNPIRNEPINKPQPARIQPLSNR 575
+S TH+ P PT P R H H+I ++T+T++ I P + P
Sbjct: 89 YSPLHTHDSIPTPTY---P-HLRLHTHHSISRLYTYTYDFIPTTPYSPLHTHDSIPTPTT 144
Query: 576 PQRPIFRPET 605
P P+ P++
Sbjct: 145 PYSPLHIPDS 154
>SB_1015| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 828
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/64 (34%), Positives = 27/64 (42%)
Frame = +1
Query: 265 LDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 444
L EP KP EPE E P + S + EP+ F D S KPP P+
Sbjct: 487 LQEPIKP--PEPEPLKEAPPPVSISPA-----EPKVKFLDSVKISSYKPPEPNPVAPKEP 539
Query: 445 PSPV 456
P P+
Sbjct: 540 PKPI 543
>SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0)
Length = 563
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Frame = +1
Query: 382 DITTTSQPKPPIIFNP-FPQS---SPSPVKLD---PIRPTQYR 489
D+ TTS P P +++ P P S PSP K D P PT +R
Sbjct: 88 DVRTTSPPTPMVVYGPHLPPSMPAPPSPRKADRGWPFPPTVHR 130
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +1
Query: 325 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLD 465
PT + P ++TTT P PP + P + P PV D
Sbjct: 39 PTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTD 85
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 325 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 420
P + +SG S P+P D Y++T + P+P +
Sbjct: 1396 PGYYCTSGVSVPKPYIDTYNVTNGTCPEPSFL 1427
>SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)
Length = 592
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 241 LTSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTP--EPQNDFYDI 387
+T+ +++ D+PAK PED +P EP ++FYDI
Sbjct: 97 MTALSVEPADKPAKKADNIPEDLQRCGKAAVLGKMSIVSPNSEPIDNFYDI 147
>SB_22052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 285 RFRRFIK*LKIGRGEASTDLKDGLANPGLLTLGIEPGT--GAILPCLKPPCLTGPPTGMA 112
R RRFI K+ + + + ++ D L+ P L ++ + P T + PC + PP G
Sbjct: 40 RHRRFISLCKLEKSDCTPNINDVLSKPYLCSMELNPATIGQSSTPCNSNGTIP-PPIGAF 98
Query: 111 PG 106
G
Sbjct: 99 NG 100
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +1
Query: 247 SSNLQSLDEPA---KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK-PP 414
+ L ++PA +PV +P++ + ++ +S S+P PQ D + T + K P
Sbjct: 401 NKTLPMQEDPAIATQPVQPKPQEVDSSSAGSSVQTSNDSSPAPQEDDKSSSATEEYKSEP 460
Query: 415 IIFNPFPQSSPSP 453
P SP P
Sbjct: 461 SSAQPSANQSPEP 473
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Frame = +1
Query: 244 TSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTP-EPQNDFYDITTT-SQP---K 408
T++ + P KP T P TPT + +TP +P TTT ++P
Sbjct: 65 TNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTT 124
Query: 409 PPIIFNPF-PQSSPSPVKLDPIRPT 480
PP P P ++ P P +PT
Sbjct: 125 PPGTTTPTKPTTTTPPATTTPTKPT 149
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/75 (24%), Positives = 25/75 (33%)
Frame = +1
Query: 244 TSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 423
T++ + P KP T P PT + G +TP TT+ KP
Sbjct: 93 TTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTT 152
Query: 424 NPFPQSSPSPVKLDP 468
P + P P
Sbjct: 153 PPATTTPTKPTTTTP 167
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Frame = +1
Query: 298 PEDEYEINTPTAFSSSGYSTPEP------QNDFYDITTTSQPKPPIIFNP--FPQSSPSP 453
P E NTP ++ Y+TP Q + +TT+QP P F P P P+P
Sbjct: 825 PAQTTEANTPPVQTTESYNTPTETTALPYQETSTESSTTAQPTQPPTFAPSIAPTQPPTP 884
>SB_738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 510 NPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFV 617
NPI + P N P+ + P PI P T P +
Sbjct: 14 NPIMSPPTNPIMSPPTSPIMSPPTNPIMSPPTNPIM 49
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 510 NPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFV 617
NPI + P N P+ + P PI P T P +
Sbjct: 6 NPIMSPPTNPIMSPPTNPIMSPPTSPIMSPPTNPIM 41
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 65 YAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVP--GSIPRVRRPGFARPSFKS 232
+A N SP R GA G P+ + R VP G IP ++RP F PSF S
Sbjct: 820 HAMNKSP--ERSPREGADRRGLPMTLSDLNRRREQGVPSEGPIPGLKRPDFLLPSFGS 875
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +1
Query: 292 EEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPI 471
EE E E+ +P+ TPE + T P NP P +P P P
Sbjct: 431 EEEETLEEVTSPSE-EQPAEPTPEEHVEPEPTLATGSSNPHHHGNPHPHGNPRPKPQLPQ 489
Query: 472 RPT 480
RPT
Sbjct: 490 RPT 492
>SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 729
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 65 YAQNDSPIPPRLQIPGAIPVGGPVRQGGFRQGRIAPVP--GSIPRVRRPGFARPSFKS 232
+A N SP R GA G P+ + R VP G IP ++RP F PSF S
Sbjct: 16 HAMNKSP--ERSPREGADRRGLPMTLSDLNRRREQGVPSEGPIPGLKRPDFLLPSFGS 71
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +1
Query: 289 TEEPEDEYEINTPTAFSSSGYS-TPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
T P NTP F+SSG+ P P DF P PP + P P P
Sbjct: 279 TPPPPPPPPSNTPGMFASSGFQPPPPPPTDF-----APPPPPPEPTSELPPPPPPP 329
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 602 FRPEYRSLRSIGKWLNS-GRLRFVNWFVSDRVEGV 501
++ E R + W+NS G R+VNW SD +G+
Sbjct: 299 YQEETREELTYRNWINSMGCGRYVNWLYSDFFDGI 333
>SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03)
Length = 435
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -3
Query: 207 PGLLTLGIEPGTGAILPCLKPPCLTGPPTGMAPGI 103
PGL G+ PG +LPCL P L G P G+ PG+
Sbjct: 189 PGLP--GVLPGLPGVLPCL-PGVLPGLP-GVLPGL 219
>SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12)
Length = 1093
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 265 LDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDF 378
+DEP KP ++E +++Y +N P SS +N F
Sbjct: 589 IDEPVKPKSKEKKNKY-LNVPELGSSKSEKVMMEENTF 625
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 298 PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 456
PED+ E+++ +A +SS ST P N + S + P ++P P+
Sbjct: 30 PEDDLEVSSVSASASS--STSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPL 80
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = +3
Query: 456 QARSHPSHAIQT-VFTHTFNPIRNEPINKPQPARIQPLSNRPQRP--IFRPETKPFVXXX 626
QA P H +Q + H P + + + P + QPL + PQ P I E P +
Sbjct: 1162 QAMGPPHHTMQQPLIHHPHEPHQVQAMGPPPHSMQQPLLHHPQDPHHIQAMEPPPHIQQR 1221
Query: 627 XXIQPVRQYTRPQEPIRAPVRNTQQ 701
+ Q+ +R N QQ
Sbjct: 1222 NYVVMSTMKIANQDVVRTFPNNLQQ 1246
>SB_36903| Best HMM Match : p450 (HMM E-Value=0)
Length = 644
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 328 TAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS 441
T F S+ T P + F+++T PKPP++ P P+S
Sbjct: 534 TLFGSTCAKTFNP-DIFWNVTFPKTPKPPVVPIPQPKS 570
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,559,721
Number of Sequences: 59808
Number of extensions: 522470
Number of successful extensions: 1863
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1848
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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