Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00757
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 35 0.065
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 35 0.065
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 32 0.35
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 32 0.46
U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian ... 32 0.46
Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 30 1.4
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 30 1.4
U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC006626-3|AAF39789.1| 295|Caenorhabditis elegans Hypothetical ... 29 3.2
AC006626-2|AAK68157.1| 318|Caenorhabditis elegans Hypothetical ... 29 3.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 4.3
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 29 4.3
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 29 4.3
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 29 4.3
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 29 4.3
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 29 4.3
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 28 5.6
X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein. 28 5.6
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 28 5.6
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 28 5.6
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 28 5.6
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 28 5.6
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 28 5.6
AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and gl... 28 5.6
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 28 5.6
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical p... 28 7.4
Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 7.4
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 7.4
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 7.4
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 7.4
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 7.4
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 28 7.4
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 7.4
AF045638-2|AAC02560.1| 110|Caenorhabditis elegans Hypothetical ... 28 7.4
AC006729-10|AAL32234.1| 487|Caenorhabditis elegans Hypothetical... 28 7.4
AC006729-9|AAF60470.1| 670|Caenorhabditis elegans Hypothetical ... 28 7.4
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 27 9.8
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 27 9.8
U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical p... 27 9.8
U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical pr... 27 9.8
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 27 9.8
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 27 9.8
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 27 9.8
AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical... 27 9.8
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 27 9.8
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 27 9.8
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 9.8
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.065
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +1
Query: 265 LDEPAKPVTEEPEDEYEINT-------PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 423
LD+PA T++P+ ++ + P Y P + TTT+ PPI+
Sbjct: 279 LDDPATTTTQQPKRGFQSISMSMRQPLPGKIHDGQYLKPTTTSSSTTTTTTTTAPPPIVD 338
Query: 424 NPFPQSSPSPV---KLDPIRPTQ 483
FPQ + + V + PIRP Q
Sbjct: 339 QEFPQIAINSVGVRRKGPIRPAQ 361
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 34.7 bits (76), Expect = 0.065
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +1
Query: 265 LDEPAKPVTEEPEDEYEINT-------PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 423
LD+PA T++P+ ++ + P Y P + TTT+ PPI+
Sbjct: 280 LDDPATTTTQQPKRGFQSISMSMRQPLPGKIHDGQYLKPTTTSSSTTTTTTTTAPPPIVD 339
Query: 424 NPFPQSSPSPV---KLDPIRPTQ 483
FPQ + + V + PIRP Q
Sbjct: 340 QEFPQIAINSVGVRRKGPIRPAQ 362
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/85 (31%), Positives = 34/85 (40%)
Frame = +3
Query: 417 NL*PVPTIFS*PCQARSHPSHAIQTVFTHTFNPIRNEPINKPQPARIQPLSNRPQRPIFR 596
N P PT + R HP T + P R P + QP P QRP FR
Sbjct: 1979 NTAPQPTTYQ-----RPHPIKVQVRPATKPYRP-RPSPAPRIQPRPYNPQPVVVQRPQFR 2032
Query: 597 PETKPFVXXXXXIQPVRQYTRPQEP 671
P+ +P QP Q +PQ+P
Sbjct: 2033 PQPQPRPQPQPQPQPQPQ-PQPQQP 2056
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 528 PINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIRAPVRNTQQ 701
P+ +PQP + P Q+PI +P QP+ Q PQ P ++N Q
Sbjct: 741 PVQQPQPHQYAPQPIHHQQPIHQPMHGQQYPPVNQQQPIYQQPAPQYPPYNSIQNNPQ 798
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 528 PINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIRAPVRNTQQ 701
P+ +PQP + P Q+PI +P QP+ Q PQ P ++N Q
Sbjct: 745 PVQQPQPHQYAPQPIHHQQPIHQPMHGQQYPPVNQQQPIYQQPAPQYPPYNSIQNNPQ 802
>U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian
oncogene) relatedkinase protein 1, isoform a protein.
Length = 566
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Frame = +1
Query: 247 SSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPII-- 420
SS +S D PV+E T +A S YS E + + +QP PP +
Sbjct: 455 SSIFKSFDTELDPVSENDHQPLIPETSSATCQSTYSNDEDVTISEKVVSPAQPLPPPLSP 514
Query: 421 -------FNPFPQSSPSPVKLDPIRPTQY 486
F P+S S +++ RP Q+
Sbjct: 515 RKGSLQCFESVPRSRDSVIRMSRHRPLQF 543
>Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical
protein F53C11.2 protein.
Length = 693
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 1 VTCDREHHAYVTDFYAVCFNSLCTK 75
VTCD + H +VT +AVC S C++
Sbjct: 137 VTCDPKTHEHVTPRFAVCMPSSCSE 161
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 374 TSTTSPPLLSQNHP*SLTRSHNLLLALSS*IPSVPRNTDRLHPHLQP 514
T +T PP + P LT + + L+LS+ + ++P +L PH+ P
Sbjct: 302 TPSTDPPPMHMTTPSVLTTNFSTPLSLSTNVYNLPPPESQLIPHMTP 348
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 374 TSTTSPPLLSQNHP*SLTRSHNLLLALSS*IPSVPRNTDRLHPHLQP 514
T +T PP + P LT + + L+LS+ + ++P +L PH+ P
Sbjct: 302 TPSTDPPPMHMTTPSVLTTNFSTPLSLSTNVYNLPPPESQLIPHMTP 348
>U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical
protein K02F3.5 protein.
Length = 308
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 319 NTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 444
NTP A + YS P P + Y + S +PP+ P PQ S
Sbjct: 78 NTPQADYGNPYSYPRPYSRTYHRNSISPIRPPVPM-PIPQIS 118
>AC006626-3|AAF39789.1| 295|Caenorhabditis elegans Hypothetical
protein CC8.2a protein.
Length = 295
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 334 FSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 444
FS+ STP PQ + +QP P ++ + FP S
Sbjct: 86 FSTPSSSTPPPQLPHFPKQLINQPAPRLVLHNFPYRS 122
>AC006626-2|AAK68157.1| 318|Caenorhabditis elegans Hypothetical
protein CC8.2b protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 334 FSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 444
FS+ STP PQ + +QP P ++ + FP S
Sbjct: 109 FSTPSSSTPPPQLPHFPKQLINQPAPRLVLHNFPYRS 145
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGY-STPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 450
P P + P ++ I+T T++SS+ +TP+P + P P I NP P P+
Sbjct: 434 PPPPPSAPPTIKFPISTGTSYSSTTPPTTPKP----------APPPPSRIPNPSPSPQPA 483
Query: 451 PVKLDPIRP 477
V P P
Sbjct: 484 EVSKSPPPP 492
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 268 DEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSP 447
DEPA+P+ ++ N +SS ++PEP ++ + + PP P P++ P
Sbjct: 433 DEPAEPIAQKAAAPVSPNP----ASSRSASPEPAQQVDELLESEEAAPPPPPPPPPENEP 488
>Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical
protein M117.4 protein.
Length = 662
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 513 PIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIR 677
P++ P + P A +QP R +R + P +P +P Q +PQ+P R
Sbjct: 279 PVQRTPGSHPS-AYLQPTRARTERSLKLPPAEPKSVDERPRKPSTQILQPQQPNR 332
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 513 PIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQ 650
P R P +P A+ QP RPQ P RP P I+P Q
Sbjct: 226 PARPAPYIEPSTAKPQP---RPQPPRTRPYVAPSTTTQRYIEPTTQ 268
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 271 EPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK 408
E ++ EP+DEY+ + S +G S P+ + D +PK
Sbjct: 485 ESSEGTGSEPDDEYDSGSEQDSSGTGESEPDSEQDVPSKRRKGEPK 530
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 510 NPIRNEPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIRAPVR 689
+PI ++P +P+ +Q S P+ +PE+ +P Q T P E I+ P
Sbjct: 322 SPISSKPATTTEPSPLQASSKPATEPLLQPESARTASSSASSKPEVQTTIPTE-IQTPSL 380
Query: 690 NT 695
T
Sbjct: 381 RT 382
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 301 EDEYEINTPTAFSSSGYSTP-EPQNDFYDITTTSQPKPPIIFNPFPQSSPS 450
+DE + + P F+ P + +D YD+ TS+ PP NP + PS
Sbjct: 202 DDEEDDDGPADFTDMPLLKPVDEDDDCYDVPCTSEGPPPNNSNPAITTIPS 252
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 301 EDEYEINTPTAFSSSGYSTP-EPQNDFYDITTTSQPKPPIIFNPFPQSSPS 450
+DE + + P F+ P + +D YD+ TS+ PP NP + PS
Sbjct: 202 DDEEDDDGPADFTDMPLLKPVDEDDDCYDVPCTSEGPPPNNSNPAITTIPS 252
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -3
Query: 207 PGLLTLGIEPGTGAILPCLKPPCLTGPPTGMAPGICSLGGIGESFCA*AVKANSIE 40
P + +G++P G+IL TGP TG AP + GIG F + S++
Sbjct: 538 PNAIVVGVDPN-GSIL--------TGPTTGPAPDFYEVEGIGYDFIPGTLDEKSVD 584
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 6/50 (12%)
Frame = +2
Query: 89 PPRLQIPGAIPVG------GPVRQGGFRQGRIAPVPGSIPRVRRPGFARP 220
PP Q+PG+ P G GP F G APV +P PG P
Sbjct: 243 PPGPQVPGSYPSGPADIPQGPGMPRAFPPGASAPVAPGMPGAFPPGQGGP 292
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 81 LLFHRDYKYQEPFLSEDQSGKAA 149
L +HRD +YQ P + ED +G+ A
Sbjct: 2444 LNYHRDKRYQIPLVVEDATGRRA 2466
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 81 LLFHRDYKYQEPFLSEDQSGKAA 149
L +HRD +YQ P + ED +G+ A
Sbjct: 2444 LNYHRDKRYQIPLVVEDATGRRA 2466
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 81 LLFHRDYKYQEPFLSEDQSGKAA 149
L +HRD +YQ P + ED +G+ A
Sbjct: 2444 LNYHRDKRYQIPLVVEDATGRRA 2466
>X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein.
Length = 402
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 492 VFTHTFNPIRNEPINKPQPARIQPLSNRPQRPI-FRPETKPFV 617
+ TFNP+ N I QP QPL +R R + F +P++
Sbjct: 62 ILLDTFNPVFNFSIQLVQPFTGQPLGDRIYRKVQFSGTNQPWI 104
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 280 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 456
+P+ E ED Y + T G P D+Y IT + P + + P +S P P+
Sbjct: 1386 RPMVEYCEDIYWTHR-TGQLPPGLQVPRRPYDYYHITERTPPPEDLNWVPPAESPPIPI 1443
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 280 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 456
+P+ E ED Y + T G P D+Y IT + P + + P +S P P+
Sbjct: 1386 RPMVEYCEDIYWTHR-TGQLPPGLQVPRRPYDYYHITERTPPPEDLNWVPPAESPPIPI 1443
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 164 IAPVPGSIPRVRRPGFARPSFKSVDASPRPIFSHLMN---LRNLLLKNQK-MNTKLTLLQ 331
+APV G+ R R+P P ASP P FS+LMN L + N M L+++Q
Sbjct: 96 VAPVSGA--RKRKPKERSPP---AAASPLPDFSNLMNGFMFDPLNMSNPNGMMQLLSMVQ 150
Query: 332 LFRPAATLHPNLKMTSTTSPP 394
+ H +++ + SPP
Sbjct: 151 QQQQQQQHHQHIENQQSVSPP 171
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 164 IAPVPGSIPRVRRPGFARPSFKSVDASPRPIFSHLMN---LRNLLLKNQK-MNTKLTLLQ 331
+APV G+ R R+P P ASP P FS+LMN L + N M L+++Q
Sbjct: 96 VAPVSGA--RKRKPKERSPP---AAASPLPDFSNLMNGFMFDPLNMSNPNGMMQLLSMVQ 150
Query: 332 LFRPAATLHPNLKMTSTTSPP 394
+ H +++ + SPP
Sbjct: 151 QQQQQQQHHQHIENQQSVSPP 171
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.6
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 164 IAPVPGSIPRVRRPGFARPSFKSVDASPRPIFSHLMN---LRNLLLKNQK-MNTKLTLLQ 331
+APV G+ R R+P P ASP P FS+LMN L + N M L+++Q
Sbjct: 96 VAPVSGA--RKRKPKERSPP---AAASPLPDFSNLMNGFMFDPLNMSNPNGMMQLLSMVQ 150
Query: 332 LFRPAATLHPNLKMTSTTSPP 394
+ H +++ + SPP
Sbjct: 151 QQQQQQQHHQHIENQQSVSPP 171
>AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein2 protein.
Length = 402
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 492 VFTHTFNPIRNEPINKPQPARIQPLSNRPQRPI-FRPETKPFV 617
+ TFNP+ N I QP QPL +R R + F +P++
Sbjct: 62 ILLDTFNPVFNFSIQLVQPFTGQPLGDRIYRKVQFSGTNQPWI 104
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 280 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 456
+P+ E ED Y + T G P D+Y IT + P + + P +S P P+
Sbjct: 1386 RPMVEYCEDIYWTHR-TGQLPPGLQVPRRPYDYYHITERTPPPEDLNWVPPAESPPIPI 1443
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +1
Query: 265 LDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 444
L EP +P T P+ P + P D Y+ ++P PP P P +
Sbjct: 426 LTEPDEPSTYTPKPIAYEPEPMVYKPEAMK-PAVSYDAYE-EPPAEPAPPTFLAPTPVIA 483
Query: 445 PSPVKLDPIRPTQY 486
P P + P P+ Y
Sbjct: 484 PPPPEPTP-APSHY 496
>Z73098-10|CAA97336.2| 391|Caenorhabditis elegans Hypothetical
protein T21C9.9 protein.
Length = 391
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +3
Query: 540 PQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIRAPV 686
P P IQP + RPQ I RP +P QP R RP APV
Sbjct: 94 PNPRYIQPQAPRPQY-ISRPAPRP---APAPYQPPRVQERPYVQPAAPV 138
>Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical
protein F54F7.4 protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 346 GYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKL 462
G P D+Y+I P PP FN P + P P+++
Sbjct: 259 GLVVPRRPLDYYNIIPNLSP-PPEDFNWIPPNEPPPIEI 296
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 426 PVPTIFS*PCQARSHPSHAIQTVFTHTFNPIRNEPINKPQPARIQPL 566
P + F Q+ S S + +F F + P KP PAR P+
Sbjct: 139 PSKSPFKKAIQSGSESSDSDSIIFDEVFEEVLPSPPRKPAPARTAPI 185
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 280 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 444
K T E + PT+ S+S ST P + +TTSQ P + P+SS
Sbjct: 345 KTRTSEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQSSPAST-STVPESS 398
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN-PFPQSS 444
D PAKPV+ PE E + TP + + P+ + ++ S P + P
Sbjct: 681 DAPAKPVSL-PEPEKK--TPV-LAKKAPTKPDSEAAADPVSGPSSKDPKLAKKAPVKPRD 736
Query: 445 PSPVKLDPIRP 477
PSP+K PI+P
Sbjct: 737 PSPMKAVPIKP 747
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Frame = +1
Query: 340 SSGYSTPEPQNDFYDITTTSQPKPPIIFN--------PFPQSSPSPVKLDP 468
+S Y+ P P + S P PII N P P P PV+L P
Sbjct: 108 ASPYNPPPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSP 158
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Frame = +1
Query: 340 SSGYSTPEPQNDFYDITTTSQPKPPIIFN--------PFPQSSPSPVKLDP 468
+S Y+ P P + S P PII N P P P PV+L P
Sbjct: 749 ASPYNPPPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSP 799
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Frame = +1
Query: 340 SSGYSTPEPQNDFYDITTTSQPKPPIIFN--------PFPQSSPSPVKLDP 468
+S Y+ P P + S P PII N P P P PV+L P
Sbjct: 749 ASPYNPPPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSP 799
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +3
Query: 507 FNPIRNEPINKPQPARIQPLSNRPQRPIF--RPETK-PFVXXXXXIQPVRQY----TRPQ 665
F PI +PI QP + +P RPQ P F P T+ PF P R TRP
Sbjct: 192 FRPI--QPIQPQQPFQPRPFQPRPQ-PAFTQAPFTQAPFTQAPFTRPPFRPQPNFATRPA 248
Query: 666 EPIRAP 683
+P AP
Sbjct: 249 QPQPAP 254
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Frame = +1
Query: 340 SSGYSTPEPQNDFYDITTTSQPKPPIIFN--------PFPQSSPSPVKLDP 468
+S Y+ P P + S P PII N P P P PV+L P
Sbjct: 749 ASPYNPPPPSSQVIRSVNASPPTAPIIHNKMIIREDIPAPPRPPPPVELSP 799
>AF045638-2|AAC02560.1| 110|Caenorhabditis elegans Hypothetical
protein C35B1.4 protein.
Length = 110
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 289 TEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 423
T EPE +T SG+ T EP+ + T P+PP+ F
Sbjct: 63 TWEPEASGFPSTDGEQEWSGFPTIEPEASEFSTTEKEPPRPPLPF 107
>AC006729-10|AAL32234.1| 487|Caenorhabditis elegans Hypothetical
protein Y24D9A.1b protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 259 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYST--PEPQNDFYDITTTSQPKPPIIFNPF 432
+ L+E AK + P+D+ + P+ Y T PEP N + P PP +
Sbjct: 389 EKLEEAAK-IPSPPKDQKSL--PSIVEEDDYYTAPPEPANK-RRAHNLAPPPPPPVQVVT 444
Query: 433 PQSSPSPVKLDPIRP 477
PQ++ S + P+ P
Sbjct: 445 PQTTSSQTETGPLPP 459
>AC006729-9|AAF60470.1| 670|Caenorhabditis elegans Hypothetical
protein Y24D9A.1a protein.
Length = 670
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 259 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYST--PEPQNDFYDITTTSQPKPPIIFNPF 432
+ L+E AK + P+D+ + P+ Y T PEP N + P PP +
Sbjct: 389 EKLEEAAK-IPSPPKDQKSL--PSIVEEDDYYTAPPEPANK-RRAHNLAPPPPPPVQVVT 444
Query: 433 PQSSPSPVKLDPIRP 477
PQ++ S + P+ P
Sbjct: 445 PQTTSSQTETGPLPP 459
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = +1
Query: 280 KPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
KP T E + TA + + P P TT P PP P P ++ +P
Sbjct: 150 KPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAP 207
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +1
Query: 361 EPQNDFYDITTT---SQPKPPIIFNPFPQSSPSPVKLDPIRP 477
EP D TT P PP+ +P PQ + +PV++ I P
Sbjct: 309 EPTEAEADAPTTFILPPPPPPMKLDPSPQPAATPVEITEIPP 350
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 403 PKPPIIFNPFPQSSPSPV---KLDPIRPTQ 483
P +FNPF QS+PSP P+ PT+
Sbjct: 1058 PPQACLFNPFTQSAPSPAPPPSTIPLPPTR 1087
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 403 PKPPIIFNPFPQSSPSPV---KLDPIRPTQ 483
P +FNPF QS+PSP P+ PT+
Sbjct: 1052 PPQACLFNPFTQSAPSPAPPPSTIPLPPTR 1081
>U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical
protein F08F8.10a protein.
Length = 487
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 328 TAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 450
T +S+ Y T P+ND Y P FNPF Q+SPS
Sbjct: 183 TLNTSNVYQT-YPEND-YSFFPAPAPSSLSSFNPFGQTSPS 221
>U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical
protein F08F8.10b protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 328 TAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 450
T +S+ Y T P+ND Y P FNPF Q+SPS
Sbjct: 180 TLNTSNVYQT-YPEND-YSFFPAPAPSSLSSFNPFGQTSPS 218
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 525 EPINKPQPARIQPLSNRPQRPIFRPETKPFVXXXXXIQPVRQYTRPQEPIRAPVR 689
+P+ +PQP I+P +PQR +P + F +QPVR + ++ +R
Sbjct: 118 QPVQQPQPTPIRP--PQPQRSGQQP-VQSFESHTQIVQPVRAVQANAQLVQPVIR 169
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 403 PKPPIIFNPFPQSSPSPV---KLDPIRPTQ 483
P +FNPF QS+PSP P+ PT+
Sbjct: 1058 PPQACLFNPFTQSAPSPAPPPSTIPLPPTR 1087
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 403 PKPPIIFNPFPQSSPSPV---KLDPIRPTQ 483
P +FNPF QS+PSP P+ PT+
Sbjct: 1052 PPQACLFNPFTQSAPSPAPPPSTIPLPPTR 1081
>AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical
protein Y47H9C.15 protein.
Length = 190
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/79 (29%), Positives = 30/79 (37%)
Frame = +1
Query: 232 RGCLTSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP 411
+ L S+ DE K ++E EDE F P PQ P
Sbjct: 113 KAALEQSDKVESDEEEK-LSESDEDEEGRGAVDEFEFESNDVPSPQ----------APPT 161
Query: 412 PIIFNPFPQSSPSPVKLDP 468
P I +P P +S SP+ DP
Sbjct: 162 PSIADPGPTASSSPLTQDP 180
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 403 PKPPIIFNPFPQSSPSPV---KLDPIRPTQ 483
P +FNPF QS+PSP P+ PT+
Sbjct: 1052 PPQACLFNPFTQSAPSPAPPPSTIPLPPTR 1081
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 403 PKPPIIFNPFPQSSPSPV---KLDPIRPTQ 483
P +FNPF QS+PSP P+ PT+
Sbjct: 1058 PPQACLFNPFTQSAPSPAPPPSTIPLPPTR 1087
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 9.8
Identities = 34/135 (25%), Positives = 51/135 (37%), Gaps = 4/135 (2%)
Frame = +1
Query: 91 TETTNTRSHSCRRTSQARRLQARKDSTGAWFNS*SKKTRICQTVF*IRGCLTSSNLQSLD 270
T TT+T S S T+ ++ ST + + ++ T T S +S
Sbjct: 181 TTTTSTTS-STTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTT 239
Query: 271 EPAKPVTEEPEDEYEINTP--TAFSSSGYSTPEPQNDFYDITTTSQPK-PPIIFNP-FPQ 438
E T+ E + T S+ ST E + D TTTS P P I+ P PQ
Sbjct: 240 ESTSTSTDSTTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTSLPALPLILLQPSLPQ 299
Query: 439 SSPSPVKLDPIRPTQ 483
+ + P+ Q
Sbjct: 300 NQLRSLPAHPLNLLQ 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,416,256
Number of Sequences: 27780
Number of extensions: 392313
Number of successful extensions: 1743
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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