Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00757
(701 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 37 0.015
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 35 0.045
At3g22070.1 68416.m02785 proline-rich family protein contains pr... 33 0.14
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 33 0.14
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 32 0.32
At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-contain... 32 0.42
At4g34440.1 68417.m04894 protein kinase family protein contains ... 31 0.74
At4g24150.1 68417.m03465 expressed protein ; expression supporte... 31 0.74
At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger) fa... 31 0.98
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 31 0.98
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 30 1.3
At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family... 30 1.3
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.7
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 1.7
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.7
At5g43820.1 68418.m05358 pentatricopeptide (PPR) repeat-containi... 29 2.3
At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein lo... 29 2.3
At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein lo... 29 2.3
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 29 2.3
At1g70250.1 68414.m08082 receptor serine/threonine kinase, putat... 29 2.3
At1g67500.1 68414.m07688 DNA polymerase family B protein similar... 29 2.3
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 3.0
At5g12440.1 68418.m01462 zinc finger (CCCH-type) family protein ... 29 3.0
At3g20680.1 68416.m02617 expressed protein 29 3.0
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 3.0
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 3.0
At3g25500.1 68416.m03171 formin homology 2 domain-containing pro... 29 3.9
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 29 3.9
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 29 3.9
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 29 3.9
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 29 3.9
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 28 5.2
At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger) fa... 28 5.2
At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger) fa... 28 5.2
At5g22760.1 68418.m02658 PHD finger family protein contains Pfam... 28 6.9
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 28 6.9
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 28 6.9
At5g01160.1 68418.m00020 e-cadherin binding protein-related cont... 27 9.1
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 27 9.1
At4g01290.1 68417.m00170 expressed protein 27 9.1
At1g79470.1 68414.m09262 inosine-5'-monophosphate dehydrogenase ... 27 9.1
At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family... 27 9.1
At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family... 27 9.1
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do... 27 9.1
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS--SP 447
P PV P + P + +P P +Y T S P PP+ + P QS P
Sbjct: 662 PPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYLPVTQSPPPP 721
Query: 448 SPVKLDPI 471
SPV P+
Sbjct: 722 SPVYYPPV 729
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
P PV P + P +S S P P +Y T S P P+ + P QS P P
Sbjct: 648 PPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPP 707
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS-SPS 450
P PV P P ++ S P P + +T + P PP+ + P QS PS
Sbjct: 634 PPPPVYYPPVTASPPPPPVYYTPVIQSPPPPPVYYSPVTQSPPPPPPVYYPPVTQSPPPS 693
Query: 451 PVKLDPI 471
PV P+
Sbjct: 694 PVYYPPV 700
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 352 STPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
S P P +Y T S P PP+ + P QS P P
Sbjct: 631 SPPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPP 664
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS--SP 447
P PV P + +P + S P P + +T + P P+ + P +S P
Sbjct: 677 PPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSPPPP 736
Query: 448 SPVKLDPI 471
SPV P+
Sbjct: 737 SPVYYPPV 744
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/57 (26%), Positives = 21/57 (36%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
P P +Y + P + S P P Y + P PP+ + P S P P
Sbjct: 594 PSPSPPYYQYTSSPPPPTYYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPPPP 650
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/71 (26%), Positives = 25/71 (35%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
P PV P + P + S P P +Y S P P ++ P SP P
Sbjct: 691 PPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSPPPPSPVYYPPVTQSPPP 750
Query: 454 VKLDPIRPTQY 486
P P +Y
Sbjct: 751 ----PSTPVEY 757
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP--PIIFNP--FPQSSPS 450
PVT+ P +P + S P P +Y T S P P P+ ++P P SP
Sbjct: 713 PVTQSPPPP----SPVYYPPVAKSPPPPSPVYYPPVTQSPPPPSTPVEYHPPASPNQSPP 768
Query: 451 PVKLDP 468
P P
Sbjct: 769 PEYQSP 774
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/71 (23%), Positives = 26/71 (36%)
Frame = +1
Query: 259 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQ 438
QS P T P + Y +P + Y++ P +Y + P PP +
Sbjct: 576 QSPPPPKYEQTPSPREYYPSPSPPYYQ---YTSSPPPPTYYATQSPPPPPPPTYYAVQSP 632
Query: 439 SSPSPVKLDPI 471
P PV P+
Sbjct: 633 PPPPPVYYPPV 643
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 35.1 bits (77), Expect = 0.045
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP-PIIFNPFPQS--SPSP 453
PVT P +P + YS P P +Y T S P P P+ + P S PSP
Sbjct: 577 PVTNSPPPP----SPVYYPPVTYSPPPPSPVYYPQVTPSPPPPSPLYYPPVTPSPPPPSP 632
Query: 454 VKLDPIRPT 480
V P+ P+
Sbjct: 633 VYYPPVTPS 641
Score = 30.7 bits (66), Expect = 0.98
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKL 462
PVT+ P + P +S P P +Y T S P P ++ +PQ +PSP
Sbjct: 562 PVTQSPPPPSPVYYPPVTNSP----PPPSPVYYPPVTYSPPPPSPVY--YPQVTPSPPPP 615
Query: 463 DPI 471
P+
Sbjct: 616 SPL 618
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP-PIIFNPFPQS--SPSP 453
PVT P +P + S P P +Y T S P P P+ + P S PSP
Sbjct: 592 PVTYSPPPP----SPVYYPQVTPSPPPPSPLYYPPVTPSPPPPSPVYYPPVTPSPPPPSP 647
Query: 454 VKLDPIRPT 480
V P+ P+
Sbjct: 648 VYYPPVTPS 656
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP-PIIFNPFPQS--SPSP 453
PVT+ P +P + S P P +Y T S P P P+ + P S PSP
Sbjct: 547 PVTQSPPPP----SPVYYPPVTQSPPPPSPVYYPPVTNSPPPPSPVYYPPVTYSPPPPSP 602
Query: 454 VKLDPIRPT 480
V + P+
Sbjct: 603 VYYPQVTPS 611
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 352 STPEPQNDFYDITTTSQPKP-PIIFNPFPQS--SPSPVKLDPI 471
S+P P +Y T S P P P+ + P QS PSPV P+
Sbjct: 536 SSPPPPVVYYAPVTQSPPPPSPVYYPPVTQSPPPPSPVYYPPV 578
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVK 459
PVT P + P S P P + Y + T P PP + P SP P K
Sbjct: 637 PVTPSPPPPSPVYYPPVTPS-----PPPPSPVYYPSETQSPPPPTEYYYSPSQSPPPTK 690
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP--PIIFNPFPQS-- 441
P P P E P + + +P P + Y T P P P+ + P S
Sbjct: 524 PPPPSPPPPCPESSPPPPVVYYAPVTQSPPPPSPVYYPPVTQSPPPPSPVYYPPVTNSPP 583
Query: 442 SPSPVKLDPI 471
PSPV P+
Sbjct: 584 PPSPVYYPPV 593
>At3g22070.1 68416.m02785 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 178
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +1
Query: 352 STPEPQNDFY----DITTTSQPKPPIIFNPFPQSSPSPVKLDP 468
STP P +F D+ TT+ P PP P P P+PV P
Sbjct: 114 STPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPPPPPAPVSASP 156
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1
Query: 322 TPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLD 465
+PT SSS +P P + P PP NP P+ SP P LD
Sbjct: 87 SPTDSSSSTSISPNPPAPIVN----PNPPPPSTPNPPPEFSPPPPDLD 130
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 268 DEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT--SQPKPP 414
DEP + E EY + TP SSGY T N+ ++T + SQP+ P
Sbjct: 147 DEPQSQILLEESSEYSLQTP---ESSGYKTSLQPNEKLEMTASQDSQPEQP 194
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +1
Query: 244 TSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 423
+SSN S P V PE N P + SS+ S P P ++S P PP+
Sbjct: 114 SSSNPNSNPNPPVTVPNPPESSSNPNPPDS-SSNPNSNPNPPE------SSSNPNPPVTV 166
Query: 424 NPFPQSSPSP 453
P+SS +P
Sbjct: 167 PNPPESSSNP 176
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 262 SLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQP-KPPIIFNPFPQ 438
S P + V PE Y TP YS P P I + S PPI++ P P
Sbjct: 198 SSPNPPEIVPSPPESGY---TPGPVLGPPYSEPGPSTPTGSIPSPSSGFLPPIVYPP-PM 253
Query: 439 SSPSP 453
+ PSP
Sbjct: 254 APPSP 258
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 247 SSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 426
SS+ L P P+T P + P + + S+ P S P PP+
Sbjct: 71 SSSYPGLSPPPGPITL-PNPPDSSSNPNSNPNPPESSSNPNPPDSSSNPNSNPNPPVTVP 129
Query: 427 PFPQSSPSP 453
P+SS +P
Sbjct: 130 NPPESSSNP 138
>At3g54800.1 68416.m06064 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF00169: Pleckstring homology
(PH) domain, PF01852: Lipid-binding START domain
Length = 733
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 238 CLTSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPI 417
CL+ N L AK V E E++ PT+ +S + ++F+D+ +P
Sbjct: 391 CLSKINTMPLKTEAKEVDLETMHAEEMDKPTSARNSLMDLNDASDEFFDV---PEPNEST 447
Query: 418 IFNPFPQSSP 447
F+ F SSP
Sbjct: 448 EFDSFIDSSP 457
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 31.1 bits (67), Expect = 0.74
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Frame = +1
Query: 235 GCLTSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPE-PQNDFYDITTTSQPKP 411
G S+ +E + P I+ P S+ +S P P T+ P
Sbjct: 17 GTPPSNGTSPSNESSPPTPPSSPPPSSISAPPPDISASFSPPPAPPTQETSPPTSPSSSP 76
Query: 412 PIIFNPFPQ-----SSPSPVKLDPIRP 477
P++ NP PQ S P+P P+ P
Sbjct: 77 PVVANPSPQTPENPSPPAPEGSTPVTP 103
>At4g24150.1 68417.m03465 expressed protein ; expression supported
by MPSS
Length = 493
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 331 AFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLD 465
AFS + + E Q + Y S P PP + PFP++ S D
Sbjct: 149 AFSEAQWHELERQRNIYKYMMASVPVPPELLTPFPKNHQSNTNPD 193
>At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 717
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = +1
Query: 79 LSYSTETTNTRSHSCRRTSQARRLQARKDSTGAWFNS*SKKTRICQTVF*IRGCLTSSNL 258
+S S E CR + +RRL R+D +GA+ + ++ + +R N
Sbjct: 601 VSSSIERLRNLHSMCRAVADSRRLIEREDLSGAYQVLTTARSNASHSDDSLRSLEVELNE 660
Query: 259 QSLDEPAKPVTEEPEDEYEINTPTA 333
S +P + ED+ E TPT+
Sbjct: 661 LSRIKPRNSILNRTEDKPEQLTPTS 685
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1
Query: 608 LSFRPEYRSLRSIGKWLNSGRLRFVNWFVSD 516
L FRP ++ S+G NS L V WF SD
Sbjct: 191 LGFRPSQGTVSSVGVLPNSQSLETVGWFASD 221
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSS--GYSTPEPQNDFYDIT--TTSQPKPPIIFNPFPQS 441
P+ V + P Y P +S YS P P D Y S P PP ++NP P S
Sbjct: 362 PSPYVYKSPPYVYSSPPPYTYSPPPYAYSPPPPCPDVYKPPPYVYSSP-PPYVYNP-PPS 419
Query: 442 SPSP 453
SP P
Sbjct: 420 SPPP 423
>At2g22510.1 68415.m02670 hydroxyproline-rich glycoprotein family
protein similar to proline-rich cell wall protein
[Gossypium barbadense] gi|451544|gb|AAA79364; contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 124
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Frame = +1
Query: 385 ITTTSQPKPPIIFNPFPQSS--PSPVKLDPIRPTQYRXXXXXXXXXXXXNQLTNLNLPEF 558
+TTT P P PFP S+ P P P+ +Q N +N+P F
Sbjct: 38 VTTTFPPLPTTTMPPFPPSTSLPQPTAFPPLPSSQIPSLPNPAQPINIPN-FPQINIPNF 96
Query: 559 -----NHFPIDL 579
N+FP +L
Sbjct: 97 PISIPNNFPFNL 108
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 298 PEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRP 477
P Y ++P YS P P ++ I+ P P I +P PQS P ++ P P
Sbjct: 704 PPAPYYYSSPQPPPPPHYSLPPPTPTYHYISPPPPPTP--IHSPPPQSHPPCIEYSPPPP 761
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 355 TPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQY 486
+P PQ+ I + P P + +NP P SP+ P P Y
Sbjct: 744 SPPPQSHPPCIEYSPPPPPTVHYNPPPPPSPAHYSPPPSPPVYY 787
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
P PV P P +S P P Y S P PP+ +P P SP+P
Sbjct: 475 PPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVY-----SPPPPPVYSSPPPPPSPAP 529
Query: 454 VKLDPIRP 477
+ RP
Sbjct: 530 TPVYCTRP 537
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 253 NLQSLDEPAKPVTEE-PEDEYEINTPTAFSS--SGYSTPEPQNDFYDITTTSQPKP 411
N +L+EP+KP EE P+ + P S S P+P++ + T QPKP
Sbjct: 425 NPPNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKP 480
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 268 DEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQ---PKPPIIFNPFPQ 438
+E KP +PE+ + P + +P+PQ + + P+PP P P+
Sbjct: 520 EESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPE 579
Query: 439 SSPSP 453
SP P
Sbjct: 580 ESPKP 584
>At5g43820.1 68418.m05358 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 680
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 201 LLTLGIEPGTGAILPCLKPPCLTGPP 124
+L+ G+ P TG + LKP C GPP
Sbjct: 386 MLSRGVLPTTGLVTSFLKPLCSYGPP 411
>At4g13730.2 68417.m02131 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 408
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 325 PTAFSSSGYSTPEPQNDFY----DITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYR 489
P +SS +S+ P +D + T+ + P PPI+ P SSPS + P P R
Sbjct: 7 PEWLNSSLWSSSPPIDDRHLRNPAATSITPPSPPIVERPPFSSSPSAISTAPAPPLPVR 65
>At4g13730.1 68417.m02132 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 449
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 325 PTAFSSSGYSTPEPQNDFY----DITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYR 489
P +SS +S+ P +D + T+ + P PPI+ P SSPS + P P R
Sbjct: 7 PEWLNSSLWSSSPPIDDRHLRNPAATSITPPSPPIVERPPFSSSPSAISTAPAPPLPVR 65
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Frame = +3
Query: 432 PTIFS*PCQARSHPSHA-------IQTVFTHTFNP-IRNEPINKPQPAR----IQPLSNR 575
P I+ P Q PS++ +Q T T++P I+ P++KP I+P ++
Sbjct: 131 PPIYPPPIQKPPTPSYSPPVKPPPVQMPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPVHK 190
Query: 576 PQRPIFRPETKP 611
P PI+ P KP
Sbjct: 191 PPTPIYSPPIKP 202
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/71 (26%), Positives = 26/71 (36%)
Frame = +1
Query: 265 LDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSS 444
L +P P P + PT S P I + PP+ P P S
Sbjct: 408 LQKPPTPTYSPPIKLPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPPVHKPPTPTYS 467
Query: 445 PSPVKLDPIRP 477
P P+K P++P
Sbjct: 468 P-PIKPPPVKP 477
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +3
Query: 432 PTIFS*PCQARSHP--SHAIQTVFTHTFNP-IRNEPINKPQPAR----IQPLSNRPQRPI 590
P + P S P S +Q T T++P I+ P+ KP I+P +P PI
Sbjct: 288 PPVHKPPTPTYSPPVKSPPVQKPPTPTYSPPIKPPPVQKPPTPTYSPPIKPPPVKPPTPI 347
Query: 591 FRPETKP 611
+ P KP
Sbjct: 348 YSPPVKP 354
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +1
Query: 271 EPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 450
+P P P + PT S P Q + PPI P P SP
Sbjct: 460 KPPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKPPTPTYSPPVKPPPIQKPPTPTYSP- 518
Query: 451 PVKLDPIRP 477
P+K P++P
Sbjct: 519 PIKPPPVKP 527
>At1g70250.1 68414.m08082 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 799
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 316 INTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPI-RPTQYR 489
+NT + + SG P P D + + PP +P P S PS + P+ RP+ R
Sbjct: 88 VNTDLS-ACSGSGAPPPPPDLFPPPSAQMLPPPPASSPAPPSPPSSSRPRPLPRPSMSR 145
>At1g67500.1 68414.m07688 DNA polymerase family B protein similar to
SP|Q61493 DNA polymerase zeta catalytic subunit (EC
2.7.7.7) {Mus musculus}; contains Pfam profile PF00136:
DNA polymerase family B
Length = 1890
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 698 LCVSNGGADWLLRSCVLSDGLDFFFLFYKRLSFRPEYRSLRSI 570
+C GG DW+++S V + L +FY+R + E R L SI
Sbjct: 1834 ICRHCGGGDWVVQSGVKCNSL-ACSVFYERRKVQKELRGLSSI 1875
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 325 PTAFSSSGYSTPEPQN-DFYDITTTSQPKPPIIFNPFPQSSPSP 453
PT S+ TP P +S P PP++ +P P SSP P
Sbjct: 29 PTTPSAPPPVTPPPSPPQSPPPVVSSSPPPPVVSSPPPSSSPPP 72
>At5g12440.1 68418.m01462 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 552
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 253 NLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPF 432
NLQ L E VT + + +P FSS+G +P+ Q++ + +P+
Sbjct: 409 NLQ-LPEFKNSVTLNHHRSFSVGSPGYFSSAGNQSPDFQSELNGADALKVTDDTLELHPY 467
Query: 433 PQSSPSPV 456
P +P V
Sbjct: 468 PVVNPMSV 475
>At3g20680.1 68416.m02617 expressed protein
Length = 338
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 218 PSFKSVDASPRPIFSHLMNLRNLLLKNQKMNTKLTLLQLFRPAATLHPNLKMTSTTSPPL 397
PS S+ IF HL ++L ++ K+N K T +LF P L +L S++SPPL
Sbjct: 19 PSPPSLSPPNSRIF-HLHFSKSLSQQHSKLNHKSTTTRLFAP---LCSSLPSPSSSSPPL 74
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT---SQPKPPIIFNPFPQSS 444
P++P P ++T T+FS S P P + TT+ SQP PP F
Sbjct: 501 PSQPPPPPPPPPLFMST-TSFSPSQPPPPPPPPPLFTSTTSFSPSQPPPPPPLPSFSNRD 559
Query: 445 PSPVKLDPIRPT 480
P PI T
Sbjct: 560 PLTTLHQPINKT 571
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 PAKPV-TEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPS 450
P P+ TE P +++P SS P P + T + P PP P P+S PS
Sbjct: 100 PPPPLPTEAPPPANPVSSPPPESSP---PPPPPTEAPPTTPITSPSPPTNPPPPPESPPS 156
Query: 451 PVKLDP 468
DP
Sbjct: 157 LPAPDP 162
>At3g25500.1 68416.m03171 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 1051
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 259 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT-----SQPKPPIIF 423
QS EP V ++ +N T SS S ++ F I+ + S+PKPP+I
Sbjct: 260 QSGREPLNRVGLPGQNPRSVNNDTISCSSSSSGSPGRSTFISISPSMSPKRSEPKPPVIS 319
Query: 424 NPFP 435
P P
Sbjct: 320 TPEP 323
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 325 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 480
P ++ +TP P + D P+P P P+S P +LD RPT
Sbjct: 242 PPRLDAARPTTPRPPSPLADAPRLDAPRPTTPKPPSPRSDPP--RLDAPRPT 291
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 325 PTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPT 480
P ++ +TP P + D P+P P P+S P +LD RPT
Sbjct: 241 PPRLDAARPTTPRPPSPLADAPRLDAPRPTTPKPPSPRSDPP--RLDAPRPT 290
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
P P T P P A + S P P TT+ PP P P SSP P
Sbjct: 23 PTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTA---PPPANPPPPVSSPPP 79
Query: 454 VKLDPIRP 477
P P
Sbjct: 80 ASPPPATP 87
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
P P T P P A + S P P TT+ PP P P SSP P
Sbjct: 23 PTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTA---PPPANPPPPVSSPPP 79
Query: 454 VKLDPIRP 477
P P
Sbjct: 80 ASPPPATP 87
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Frame = +1
Query: 259 QSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQND---FYDITTTSQPKPPIIFNP 429
Q L P +P + E P + + +S P P + F IT P PP +P
Sbjct: 314 QKLPPPVQPPPLRGLESDEQELPYSQNKPKFSQPPPPPNRAAFQAITQEKSPVPPPRRSP 373
Query: 430 FP-QSSPSPVKLDPIRP 477
P Q+ P P P+ P
Sbjct: 374 PPLQTPPPPPPPPPLAP 390
>At4g13100.2 68417.m02042 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 82 SYSTETTNTRSHSCRRTSQARRLQARKDSTGAWFNS*SKKTRICQTVF*IRGCLTSSNLQ 261
S +T TT R+HS R + R+D T AW S K R+ +T G ++S+ +
Sbjct: 52 SLTTPTTPVRNHSSSSLLDVMRRERRRDKT-AW-KSLRDKLRLKRTA---TGWISSNPIP 106
Query: 262 SLD 270
+LD
Sbjct: 107 TLD 109
>At4g13100.1 68417.m02041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 304
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 82 SYSTETTNTRSHSCRRTSQARRLQARKDSTGAWFNS*SKKTRICQTVF*IRGCLTSSNLQ 261
S +T TT R+HS R + R+D T AW S K R+ +T G ++S+ +
Sbjct: 88 SLTTPTTPVRNHSSSSLLDVMRRERRRDKT-AW-KSLRDKLRLKRTA---TGWISSNPIP 142
Query: 262 SLD 270
+LD
Sbjct: 143 TLD 145
>At5g22760.1 68418.m02658 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1566
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 519 RNEPINKPQPARIQPLSNRPQRPIF 593
R P +P+P + +SNR +RP+F
Sbjct: 9 RGRPRKRPRPEDLNGVSNRGKRPVF 33
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.9 bits (59), Expect = 6.9
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
Frame = +1
Query: 262 SLDEPAKPVTEEPEDEY-EINTPTAFSSSGYSTPEPQ--NDFYDITTTSQPKPPIIFNPF 432
S+ P PV+ P + +PT S TP P + + T P PP +P
Sbjct: 125 SVPSPTPPVSPPPPTPTPSVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPPPPVSPP 184
Query: 433 P----QSSPSPVKLDPIRPT 480
P S PSP + P PT
Sbjct: 185 PPTPTPSVPSPPDVTPTPPT 204
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +1
Query: 274 PAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
P KPVT+EP E P + P P + + P PI P +S SP
Sbjct: 349 PTKPVTQEPTAPKEDEAPPKEKN---VKPRPLSPYASYEDLKPPTSPI---PNSTTSVSP 402
Query: 454 VKLDPIRPTQ 483
K + TQ
Sbjct: 403 AKSKEVDATQ 412
>At5g01160.1 68418.m00020 e-cadherin binding protein-related
contains weak similarity to E-cadherin binding protein
E7 [Mus musculus GP|9622093|gb|AAF89617
Length = 360
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Frame = +1
Query: 283 PVTEEPEDEYEINTPTAF--SSSGYST-----PEPQNDFYDITTTSQPKPPIIFNPFPQ- 438
P+ + + E+N +F S SG+S P+ N T+ PKP I F +PQ
Sbjct: 183 PLRSQLQQSRELNRSASFAKSQSGFSQVQNYPPDSDNSRPPGFETASPKPGIRFPDYPQP 242
Query: 439 -------SSPSPVKLDPIRPTQY 486
S P P+ +P P Q+
Sbjct: 243 MNLMQPPSLPVPMNQNPGLPQQF 265
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 241 LTSSNLQSLDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKP 411
L + ++SL + T + ++ NT T+ ++ ST EP+ D + S P P
Sbjct: 444 LMEAVMKSLKDMEVEQTHQKKEPSRTNTETSEGNAAASTTEPELALSDTDSASGPTP 500
>At4g01290.1 68417.m00170 expressed protein
Length = 991
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 522 NEPINKPQPARIQPLSNRPQRPIFRPET 605
NEP + P+P + P + R R F ET
Sbjct: 183 NEPYHPPRPYKAPPFTRRDARDSFNDET 210
>At1g79470.1 68414.m09262 inosine-5'-monophosphate dehydrogenase
identical to inosine-5'-monophosphate dehydrogenase
SP|P47996 {Arabidopsis thaliana}
Length = 503
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 162 LPCLKPPCLTGPPTGMAPGICSLGGIG 82
+PC+ P T + MA + SLGGIG
Sbjct: 53 IPCVSSPMDTVSESHMAAAMASLGGIG 79
>At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family
protein
Length = 76
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 301 EDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPV 456
+D+ + +P F S +PE + + TS+PK P P+ +P+P+
Sbjct: 7 DDQSPLLSPLCFLESPEPSPESEPE---PAPTSKPKSTSTPTPIPEPAPTPI 55
>At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family
protein similar to proline-rich protein precursor
GB:AAC34889 [Glycine max]
Length = 388
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +1
Query: 292 EEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSP 453
++P+ ++ P + S+ + ++ T QP+ PI +P PQ P P
Sbjct: 81 QQPQQSHQSIPPKPNVQAHMSSFQGGGSVHEPANTMQPQAPIRKHPTPQPMPMP 134
>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
domain-containing protein contains Pfam profiles
PF02170: PAZ domain, PF02171: Piwi domain
Length = 1194
Score = 27.5 bits (58), Expect = 9.1
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Frame = -3
Query: 252 GRGEASTDLKDG-LANPGLLTLGIEPGTGAILPCLKPPCLTGPPT--------GMAPGIC 100
GRG +DG NPG + G G G L +PP PP+ G+APG
Sbjct: 102 GRGRGFVQDRDGGWVNPGQSSGGHVRGRGTQLQ--QPPPQEVPPSSSQAQVSQGVAPGDV 159
Query: 99 SLGGIGE 79
GG+G+
Sbjct: 160 GQGGVGD 166
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,666,055
Number of Sequences: 28952
Number of extensions: 366801
Number of successful extensions: 1605
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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