Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00756
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 55 1e-08
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 55 1e-08
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 30 0.42
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 27 3.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.1
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 6.8
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 25 9.0
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 55.2 bits (127), Expect = 1e-08
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +2
Query: 2 YLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160
YL LM +G ++D+++P+G+LG ++ FD G++L+ TV+ + GEE +A +
Sbjct: 100 YLNLMTTDGTTKDDVRLPEGELGNEIEEGFDEGRDLIITVVSAMGEETALACR 152
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 54.8 bits (126), Expect = 1e-08
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = +2
Query: 2 YLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160
YL LM +G ++D+++P+G+LG ++ F+ GK+L+ TV+ + GEE +A +
Sbjct: 100 YLNLMTTDGTTKDDVRLPEGELGNEIEEGFEEGKDLIITVVSAMGEEIALACR 152
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + +LTA+ S+P S+V N+S P++ S V P + S ++ SS
Sbjct: 2558 SSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSS 2613
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSP 25
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1178 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPIT 1237
Query: 24 LSAI 13
S+I
Sbjct: 1238 SSSI 1241
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 1358 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 1413
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1718 SSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1773
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2198 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N S P++ S V + P + S +L SS
Sbjct: 1346 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 1401
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S V P + S +L SS
Sbjct: 1413 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVLNSS 1461
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1490 SSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2186 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2241
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -3
Query: 204 PINAELVYLSRAVFALTAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
PI + V S +++ +SS P STV N S P++ S V + P + S +L SS
Sbjct: 803 PITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSS 861
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ ++ S + + + + S+P STV N+S P++ S + +P + S +L SS
Sbjct: 1238 SSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1658 SSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1713
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1154 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1209
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 1466 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 1521
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2493 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2541
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + + P + S +L SS
Sbjct: 2793 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSS 2841
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + TA+ S+P STV N+S P++ S + + + S IL SS
Sbjct: 3410 SSTVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSS 3465
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 477 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 525
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 885 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 933
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1041 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1089
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1821 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 1869
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2013 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2061
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2589 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 2637
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + + + S+P STV N S P++ S + P + S +L SS
Sbjct: 2738 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 2793
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSSRRSP 25
++ ++ S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3122 SSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVLNSSTAIT 3181
Query: 24 LSAI 13
S+I
Sbjct: 3182 SSSI 3185
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ ++ S V + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 3350 SSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSS 3405
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2481 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2529
Score = 26.2 bits (55), Expect = 5.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + + + S+P STV N S P++ S V + P + S +L SS
Sbjct: 2781 STPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSS 2829
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + TA+ S+P STV N+S P++ S + + P + S L +S
Sbjct: 3026 SSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTS 3081
Score = 25.8 bits (54), Expect = 6.8
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -3
Query: 204 PINAELVYLSRAVFALTAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
PI + V S +++ +SS P STV N+S P++ S + P + S +L SS
Sbjct: 407 PITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 465
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSK-SVRN-CVPRSPSGILRSS 37
++ +V S + + + + S+P STV N S P+++ SV N P + S +L SS
Sbjct: 554 SSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSS 609
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 945 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 993
Score = 25.8 bits (54), Expect = 6.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -3
Query: 204 PINAELVYLSRAVFALTAMTHSS-PQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
PI + V S +++ +SS P STV N S P++ S + P + S +L SS
Sbjct: 1091 PITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSS 1149
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 1881 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 1929
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + + + S+P STV N+S P++ S + P + S +L SS
Sbjct: 2073 STPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVLNSS 2121
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N S P++ S V P + S ++ SS
Sbjct: 2181 STPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSS 2229
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 177 SRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
S + + T + S+P STV N+S P++ S V P + S ++ SS
Sbjct: 2253 STPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSS 2301
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N S P++ S V + P + S L +S
Sbjct: 2258 SSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTS 2313
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ ++ S + + + + S+P STV N S P++ S + + P + S +L SS
Sbjct: 758 SSSILNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSS 813
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 1370 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 1425
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2210 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2265
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 198 NAELVYLSRAVFALTAMTHSSPQDFSTVHNNSLPLSKS--VRNCVPRSPSGILRSS 37
++ +V S + + T + S+P STV N+S P++ S + + P + S ++ +S
Sbjct: 2498 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTS 2553
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 138 RSASSPSKQTQLSTNKPTQH 197
+S SSPS+ + LST+KP H
Sbjct: 286 KSESSPSRSSVLSTSKPEVH 305
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 287 TNNNTEVVLGDRGASPSLTSLAIPHPLTSPTRSVVSPPAP 406
T ++ +L +SPS TSL+I TS T S S +P
Sbjct: 572 TFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSP 611
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 56 DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK*TNSAFIGLTNF*F 223
D +L L T +GK C + +C++A + A + TNS F+ +F F
Sbjct: 2869 DSNLAYVLYTSGSTGKPKGCCLTHHNVVQCMLAFQDQFAGEWDTNSRFLAFASFHF 2924
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 335 SLTSLAIPHPLTSPTRSVVSPPAP*YLP 418
S+ A H +PTRSV +P P Y P
Sbjct: 477 SMKPSADDHSRATPTRSVEAPTLPSYAP 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,502,481
Number of Sequences: 5004
Number of extensions: 42255
Number of successful extensions: 236
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -