BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00756 (764 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 49 5e-06 07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 48 1e-05 03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 46 3e-05 07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 44 1e-04 02_05_0250 + 27153048-27154453,27154546-27154885 31 0.76 12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 4.1 08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 4.1 10_01_0357 - 3928646-3928954 28 9.4 07_01_0200 + 1433859-1434377 28 9.4 07_01_0196 + 1400708-1401226 28 9.4 07_01_0192 + 1367558-1368076 28 9.4 07_01_0188 + 1334405-1334923 28 9.4 >12_02_0477 + 19503678-19503803,19504381-19504422,19504631-19504684, 19504946-19505068,19505154-19505210,19505299-19505373, 19505925-19506026 Length = 192 Score = 48.8 bits (111), Expect = 5e-06 Identities = 20/54 (37%), Positives = 40/54 (74%), Gaps = 1/54 (1%) Frame = +2 Query: 2 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160 +++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + A+K Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187 >07_03_1141 - 24264534-24264635,24265542-24265616,24265709-24265765, 24265903-24266025,24266509-24266520,24267014-24267157, 24267606-24267626 Length = 177 Score = 47.6 bits (108), Expect = 1e-05 Identities = 20/54 (37%), Positives = 39/54 (72%), Gaps = 1/54 (1%) Frame = +2 Query: 2 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160 +++L+ ++G+ ++DL++P D L Q++T F GK+L+ TV+ + GEE + A+K Sbjct: 119 FVSLLTESGNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172 >03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826, 31165816-31167650,31169294-31169424,31169993-31170075, 31170426-31170680,31171125-31171220,31171695-31171775, 31171811-31171968,31172434-31172534,31172614-31172629, 31173390-31173439,31174558-31174588,31175156-31175305, 31176135-31176173,31176288-31176410,31176496-31176552, 31176837-31176911,31177003-31177107 Length = 1496 Score = 46.0 bits (104), Expect = 3e-05 Identities = 20/54 (37%), Positives = 38/54 (70%), Gaps = 1/54 (1%) Frame = +2 Query: 2 YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160 +++L+ ++G ++DL++P D L TQ++ F GK+L+ TV+ + GEE + A+K Sbjct: 1437 FVSLLTESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALK 1490 >07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-703871, 704105-704212 Length = 162 Score = 44.4 bits (100), Expect = 1e-04 Identities = 19/55 (34%), Positives = 39/55 (70%), Gaps = 2/55 (3%) Frame = +2 Query: 2 YLTLMADNGDLREDLKIPDGD-LGTQLRTDF-DSGKELLCTVLKSCGEECVIAVK 160 +++L+ ++G+ ++DL++P D L Q++ F + GK+++ TV+ + GEE + AVK Sbjct: 102 FVSLLTESGNTKDDLRLPTDDTLTNQIKNGFGEEGKDMILTVMSAMGEEQICAVK 156 >02_05_0250 + 27153048-27154453,27154546-27154885 Length = 581 Score = 31.5 bits (68), Expect = 0.76 Identities = 20/52 (38%), Positives = 25/52 (48%) Frame = +2 Query: 17 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 172 A GD DL IPD + TQ+ T+ S C V S G C AV A+ + Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298 >12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357, 10470975-10471666,10471912-10472062,10473797-10473864, 10473964-10474042,10474763-10474765,10476427-10477255 Length = 1349 Score = 29.1 bits (62), Expect = 4.1 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +2 Query: 23 NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 166 N D D I G GTQ D +L +VLKS + CV A KA+ Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777 >08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 Length = 664 Score = 29.1 bits (62), Expect = 4.1 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 53 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 139 PDGDL ++R +SGKEL L G+ Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234 >10_01_0357 - 3928646-3928954 Length = 102 Score = 27.9 bits (59), Expect = 9.4 Identities = 14/47 (29%), Positives = 18/47 (38%) Frame = +3 Query: 15 WLTTVTCVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSP 155 W ++ + V SA T+ A C PC NP RS P Sbjct: 3 WAAAAAATASAAATAVASA----ATAAATERCVTPCSNPTARSIPRP 45 >07_01_0200 + 1433859-1434377 Length = 172 Score = 27.9 bits (59), Expect = 9.4 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = -3 Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103 LV L+ A A+ A T SSPQDF HN++ Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39 >07_01_0196 + 1400708-1401226 Length = 172 Score = 27.9 bits (59), Expect = 9.4 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = -3 Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103 LV L+ A A+ A T SSPQDF HN++ Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39 >07_01_0192 + 1367558-1368076 Length = 172 Score = 27.9 bits (59), Expect = 9.4 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = -3 Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103 LV L+ A A+ A T SSPQDF HN++ Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39 >07_01_0188 + 1334405-1334923 Length = 172 Score = 27.9 bits (59), Expect = 9.4 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%) Frame = -3 Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103 LV L+ A A+ A T SSPQDF HN++ Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,822,277 Number of Sequences: 37544 Number of extensions: 288538 Number of successful extensions: 1036 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 949 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1034 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2051430072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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