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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00756
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046...    49   5e-06
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657...    48   1e-05
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648...    46   3e-05
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70...    44   1e-04
02_05_0250 + 27153048-27154453,27154546-27154885                       31   0.76 
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703...    29   4.1  
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695     29   4.1  
10_01_0357 - 3928646-3928954                                           28   9.4  
07_01_0200 + 1433859-1434377                                           28   9.4  
07_01_0196 + 1400708-1401226                                           28   9.4  
07_01_0192 + 1367558-1368076                                           28   9.4  
07_01_0188 + 1334405-1334923                                           28   9.4  

>12_02_0477 +
           19503678-19503803,19504381-19504422,19504631-19504684,
           19504946-19505068,19505154-19505210,19505299-19505373,
           19505925-19506026
          Length = 192

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 20/54 (37%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = +2

Query: 2   YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160
           +++L+ +NG+ ++DL++P D +L +Q++  F  GK+L+ TV+ + GEE + A+K
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187


>07_03_1141 -
           24264534-24264635,24265542-24265616,24265709-24265765,
           24265903-24266025,24266509-24266520,24267014-24267157,
           24267606-24267626
          Length = 177

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 20/54 (37%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 2   YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160
           +++L+ ++G+ ++DL++P D  L  Q++T F  GK+L+ TV+ + GEE + A+K
Sbjct: 119 FVSLLTESGNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172


>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
            31165816-31167650,31169294-31169424,31169993-31170075,
            31170426-31170680,31171125-31171220,31171695-31171775,
            31171811-31171968,31172434-31172534,31172614-31172629,
            31173390-31173439,31174558-31174588,31175156-31175305,
            31176135-31176173,31176288-31176410,31176496-31176552,
            31176837-31176911,31177003-31177107
          Length = 1496

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/54 (37%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +2

Query: 2    YLTLMADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 160
            +++L+ ++G  ++DL++P D  L TQ++  F  GK+L+ TV+ + GEE + A+K
Sbjct: 1437 FVSLLTESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALK 1490


>07_01_0093 +
           702223-702348,703434-703556,703646-703702,703797-703871,
           704105-704212
          Length = 162

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/55 (34%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +2

Query: 2   YLTLMADNGDLREDLKIPDGD-LGTQLRTDF-DSGKELLCTVLKSCGEECVIAVK 160
           +++L+ ++G+ ++DL++P  D L  Q++  F + GK+++ TV+ + GEE + AVK
Sbjct: 102 FVSLLTESGNTKDDLRLPTDDTLTNQIKNGFGEEGKDMILTVMSAMGEEQICAVK 156


>02_05_0250 + 27153048-27154453,27154546-27154885
          Length = 581

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = +2

Query: 17  ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 172
           A  GD   DL IPD +  TQ+ T+  S     C V  S G  C  AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298


>12_01_1024 -
           10467644-10469274,10469424-10469482,10469820-10470357,
           10470975-10471666,10471912-10472062,10473797-10473864,
           10473964-10474042,10474763-10474765,10476427-10477255
          Length = 1349

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +2

Query: 23  NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 166
           N D   D  I  G  GTQ     D   +L  +VLKS  + CV A KA+
Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777


>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
          Length = 664

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 53  PDGDLGTQLRTDFDSGKELLCTVLKSCGE 139
           PDGDL  ++R   +SGKEL    L   G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234


>10_01_0357 - 3928646-3928954
          Length = 102

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/47 (29%), Positives = 18/47 (38%)
 Frame = +3

Query: 15  WLTTVTCVRTSKSRMVTSAHSCVLTSTAARNCCAPC*NPAVRSASSP 155
           W        ++ +  V SA     T+ A   C  PC NP  RS   P
Sbjct: 3   WAAAAAATASAAATAVASA----ATAAATERCVTPCSNPTARSIPRP 45


>07_01_0200 + 1433859-1434377
          Length = 172

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -3

Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


>07_01_0196 + 1400708-1401226
          Length = 172

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -3

Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


>07_01_0192 + 1367558-1368076
          Length = 172

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -3

Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


>07_01_0188 + 1334405-1334923
          Length = 172

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -3

Query: 189 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 103
           LV L+ A  A+ A T    SSPQDF   HN++
Sbjct: 8   LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,822,277
Number of Sequences: 37544
Number of extensions: 288538
Number of successful extensions: 1036
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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