Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00756
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...    44   2e-04
Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...    39   0.003
Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +2

Query: 29  DLREDLKIPDGDLGTQLRTDFDSGK-ELLCTVLKSCGEECVIAVKANT 169
           +L++DLK+P+GDLG  +R   +  +  +L  V+ +CGEE ++  K +T
Sbjct: 146 ELKDDLKMPEGDLGNTIREALEKDEGSVLVQVVAACGEEAILGYKIST 193


>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = +2

Query: 2   YLTLM-ADNGDLREDLKIPDGDLGTQLRTDFDSGK-ELLCTVLKSCGEECVIAVKANT 169
           Y +LM  ++ + ++DLK+PD +LG Q+R  ++  +  +L  V+ + GEE ++  K +T
Sbjct: 102 YCSLMDPESCEQKDDLKLPDTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWKVST 159


>Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 331 PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 459
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 664 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 706


>Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 331 PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 459
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 741 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 783


>Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 331 PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 459
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 664 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 706


>Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 331 PLADVTRNTSPPHFADAFRSLAPSSVILTEFKGHLRFLLAKSN 459
           P++    NTSPPH A   R+    S +L E +  +  L  K N
Sbjct: 741 PVSSENNNTSPPHSAKLTRNAQSDSALLEENEDDVEHLSDKLN 783


>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 290  NNNTEVVLGDRGASPSLTSLAIPHPLTSPTRSVVSPPAP 406
            N  T+V    RG SP  TS  +P   T+P+R    PP P
Sbjct: 1474 NRYTDVQQFSRG-SPIRTSSPVPSTQTTPSRPPQMPPPP 1511


>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 290  NNNTEVVLGDRGASPSLTSLAIPHPLTSPTRSVVSPPAP 406
            N  T+V    RG SP  TS  +P   T+P+R    PP P
Sbjct: 1474 NRYTDVQQFSRG-SPIRTSSPVPSTQTTPSRPPQMPPPP 1511


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,206,687
Number of Sequences: 27780
Number of extensions: 246917
Number of successful extensions: 829
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)