Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00755
         (777 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    25   0.60 
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          25   0.79 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.8  
AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly pro...    24   1.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.7  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 212 FNQEPSTKCCKY*GFKIVAVDLQAMAALPGVKQIQGDITK 331
           +  E S  CC+  G +  +V L    A PG K+ +  ITK
Sbjct: 69  WQMERSCMCCQESGEREASVSLFCPRAKPGEKKFRKVITK 108


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 137 LICKSLNALRARQPSSLASL*YISRLSLDVLPIF 36
           L+ + + AL  R    LAS  +I  LSL + P+F
Sbjct: 2   LVARPMQALSIRHAVILASFVWIYALSLSLPPLF 35


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 429 ISCKPVTSGAPSHTTKSA 376
           I+C+ VTS A +H  KSA
Sbjct: 13  IACQDVTSAAVNHQRKSA 30


>AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly
           protein MRJP3 protein.
          Length = 31

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 429 ISCKPVTSGAPSHTTKSA 376
           I+C+ VTS A +H  KSA
Sbjct: 13  IACQDVTSAAVNHQRKSA 30


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -3

Query: 412 YIWRTITYNQICFEALELFYYSICCFLFGNIPLNL 308
           Y W TI Y     EA +   +        N+PL L
Sbjct: 158 YAWSTIDYTYDSIEARDSAIFDGDFITENNLPLGL 192


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 404 PDVTGLHDIDEYVQSQLLLAALNITTHVLKNE 499
           P++   +D   Y+    L+ A N T H ++N+
Sbjct: 357 PEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQ 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,930
Number of Sequences: 438
Number of extensions: 4814
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)