Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00754
(832 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 98 2e-21
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 48 1e-06
SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 40 3e-04
SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 32 0.11
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 28 1.4
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 27 3.3
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 26 7.5
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac... 26 7.5
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 10.0
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 10.0
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 10.0
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 25 10.0
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 97.9 bits (233), Expect = 2e-21
Identities = 43/90 (47%), Positives = 61/90 (67%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+GS S+P E+ GLAHF EH++FMG++KYP ENE+ +++ G NA T T +YFE+
Sbjct: 54 IGSQSNPRELLGLAHFCEHLLFMGTKKYPDENEYRKYLESHNGISNAYTASNNTNYYFEV 113
Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEACKGRE 777
L A+D F+QFF+ PL ++E CK RE
Sbjct: 114 SHDALYGALDRFAQFFIDPLFLEE-CKDRE 142
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 266 YKTIRLENGLTALLISDP 319
Y+ I+LEN L LL+ DP
Sbjct: 24 YRLIKLENDLEVLLVRDP 41
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 48.4 bits (110), Expect = 1e-06
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 541 GLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFE-IQEKHLPHAMD 717
G H +EH+ FMGS+KYP F + G NA TD + T++ +E +
Sbjct: 58 GCPHTLEHLCFMGSKKYPMNGILTKFAGRACGDINACTDVDYTSYELSAAEEDGFLRLLP 117
Query: 718 MFSQFFVSPLMMKEA 762
+F+ +SP++ EA
Sbjct: 118 VFADHILSPILSDEA 132
>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
beta subunit Qcr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 457
Score = 40.3 bits (90), Expect = 3e-04
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 511 GSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEIQ 690
GS ++ A+ G AHF+EH+ F G+ K + + + G NA T E T +Y
Sbjct: 53 GSRAETAKNNGAAHFLEHLAFKGT-KNRSQKALELEFENTGAHLNAYTSREQTVYYAHAF 111
Query: 691 EKHLPHAMDMFSQFFVSPLMMKEACKGREK 780
+ +P+A+ + + + + A + RE+
Sbjct: 112 KNAVPNAVAVLADILTNSSISASAVE-RER 140
>SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 992
Score = 31.9 bits (69), Expect = 0.11
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 YSDPAEI-QGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGS-DNASTDCEVTTFYF 681
+ PAE +G+ H +EH GS KYP + F + + + NA T + T + F
Sbjct: 79 FQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLATFMNAFTASDFTFYPF 135
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 402 LSGSEFSSEPLVDSSSLELN 343
LSGS+FSS P DSS++ +N
Sbjct: 450 LSGSQFSSLPTEDSSTISMN 469
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 687 TREAFTSCHGYVQPVLR-EPANDEGGLQREREAIES 791
TREA TS + ++ V E ND+ LQ RE IES
Sbjct: 310 TREAMTSLNVNLEKVHDWEECNDDVALQYAREGIES 345
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -3
Query: 542 PCISAGSL*-LPSQHRGRR 489
P ISAGS +P QHRGRR
Sbjct: 18 PSISAGSFSTMPVQHRGRR 36
>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
E3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 150 KPEIKVLNNRSKRPVTMFHRKENVEVLPEPIKSEAIKS 263
+P I+++ N ++P+ F + LP PI+ K+
Sbjct: 771 EPSIRIICNFCRKPIFPFSNRNECNNLPTPIQRGVSKA 808
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 442 MVTGGRLNRFTSITFWV*ILI*TTS*FFLTRAEFF 338
++ G RLNRFT +++ IL+ T +++ + F+
Sbjct: 577 LICGWRLNRFTMFIYYLCILVLAT--YYVMKHNFY 609
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 25.4 bits (53), Expect = 10.0
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = +3
Query: 111 MSKRSGFQRTPKFKPEIKVLNNRSKRPVTMFHRKENVEVLPE 236
++K+ ++K + +L + V F+RK +E++P+
Sbjct: 480 INKKKNLNEVSRYKINLLLLQGVNSFEVKDFYRKRGIEIMPK 521
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 518 TATQQKYRDWRISS-NIWCLWEAKNIPKKMSSMPS*RKRAVQITLR 652
++ + K D++ S+ N+W L + K IPKK S + ++ + + L+
Sbjct: 64 SSDKSKSEDYQPSNVNVWALRKEKMIPKKHSHVKQEKRFSKSLQLQ 109
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 486 QPAPSVLAGQLQRPSRNTGIGAFRRT 563
QPA + L GQ +PS +TG G T
Sbjct: 180 QPASAGLFGQSTQPSGSTGFGLSNNT 205
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,356,686
Number of Sequences: 5004
Number of extensions: 69141
Number of successful extensions: 201
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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