Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00754
(832 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 114 9e-26
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 101 9e-22
07_03_0960 - 22902279-22902530,22902604-22902726,22902855-229029... 96 3e-20
01_06_0917 + 32978306-32978434,32978570-32978645,32979324-329793... 95 5e-20
07_03_0959 - 22885750-22886001,22886073-22886195,22886343-228864... 93 2e-19
07_03_0961 - 22921761-22921850,22922204-22922338,22922409-229225... 92 6e-19
01_06_0459 + 29538025-29538579,29539190-29539354,29539448-295395... 56 3e-08
03_02_0138 + 5837813-5838490,5839000-5839164,5839289-5839426,583... 49 5e-06
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 39 0.004
01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079... 38 0.013
02_05_0833 + 32080845-32081118,32081483-32081663,32081825-320819... 32 0.49
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 30 2.6
10_08_0648 + 19579299-19580618 29 3.4
09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757 28 7.9
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 114 bits (274), Expect = 9e-26
Identities = 47/85 (55%), Positives = 68/85 (80%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+GS++DP + QGLAHF+EHM+FMGS ++P ENE+D+++ K GGS NA T+ E T ++FE+
Sbjct: 128 MGSFADPPKAQGLAHFLEHMLFMGSSEFPDENEYDSYLSKHGGSSNAFTETEYTCYHFEV 187
Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
+ ++L A+D FSQFFVSPL+ EA
Sbjct: 188 KREYLKGALDRFSQFFVSPLVKAEA 212
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 266 YKTIRLENGLTALLISDP 319
Y+ +RL NGL ALL+ DP
Sbjct: 24 YRLLRLPNGLCALLVHDP 41
>01_06_0916 +
32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 101 bits (241), Expect = 9e-22
Identities = 42/85 (49%), Positives = 60/85 (70%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+GS+SDP ++GLAHF+EHM+F SEKYP E ++ +I + GGS NA T E T FYF++
Sbjct: 560 VGSFSDPEGLEGLAHFLEHMLFYASEKYPGEQDYTKYITEHGGSCNAYTSSETTNFYFDV 619
Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
+ A+D F+QFF+ PLM ++A
Sbjct: 620 NVANFEEALDRFAQFFIKPLMSQDA 644
>07_03_0960 -
22902279-22902530,22902604-22902726,22902855-22902941,
22903017-22903068,22903197-22903321,22903476-22903684,
22903990-22904191,22906205-22906309,22907264-22907325,
22907625-22907814,22907887-22907982,22908069-22908171,
22909117-22909220,22910239-22910325,22911238-22911323,
22911410-22911502,22912586-22912673,22912786-22912898,
22912989-22913111,22914473-22914524,22915185-22915286,
22915539-22915582,22915667-22915740,22915825-22915916,
22916566-22916633,22918572-22918647,22918767-22918952
Length = 997
Score = 95.9 bits (228), Expect = 3e-20
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+G + DP ++GLAHF+EHM+F SEKYP E+ + +I + GGS NA T CE T F+F++
Sbjct: 71 VGYFCDPEGLEGLAHFLEHMLFYASEKYPIEDSYSKYITEHGGSTNAFTTCEHTNFFFDV 130
Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
L A+D F+QFF+ PL+ +A
Sbjct: 131 NHDCLNDALDRFAQFFIKPLLSADA 155
>01_06_0917 +
32978306-32978434,32978570-32978645,32979324-32979391,
32979868-32979959,32980121-32980194,32980372-32980415,
32980752-32980803,32981200-32981319,32981391-32981503,
32981674-32981761,32982144-32982229,32982832-32982918,
32983149-32983252,32983607-32983709,32983861-32983956,
32984067-32984256,32984352-32984413,32984560-32984664,
32985163-32985364,32985473-32985681,32986413-32986537,
32986644-32986695,32986772-32986858,32987125-32987247,
32987375-32987629
Length = 913
Score = 95.5 bits (227), Expect = 5e-20
Identities = 40/85 (47%), Positives = 60/85 (70%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+GS+SDP ++GLAHF+EHM+F SEKYP EN++ ++ + GG +A T E TTF+F +
Sbjct: 52 VGSFSDPEGLEGLAHFLEHMLFYASEKYPGENDYSKYMIEHGGYCDAYTYSETTTFFFYV 111
Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
+ A+D F+QFF+ PLM ++A
Sbjct: 112 NAANFEEALDRFAQFFIKPLMSQDA 136
>07_03_0959 -
22885750-22886001,22886073-22886195,22886343-22886429,
22886504-22886555,22886701-22886825,22887002-22887213,
22887317-22887518,22887928-22888032,22889643-22889704,
22889998-22890187,22890260-22890355,22890442-22890544,
22891448-22891551,22893284-22893370,22894033-22894118,
22894397-22894489,22895615-22895777,22895899-22896011,
22896113-22896235,22897393-22897444,22897843-22897886,
22897975-22898048,22898133-22898224,22899374-22899441,
22900817-22900892,22900952-22901215
Length = 1015
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+G + DP + GLAHF+EHM+F SEKYP E+++ +I + GGS NA T E T FYF++
Sbjct: 97 VGYFCDPERLPGLAHFLEHMLFYASEKYPVEDDYSKYIAEHGGSTNAFTCRERTNFYFDV 156
Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
L A+D F+QFF+ PL+ +A
Sbjct: 157 NNSCLDDALDRFAQFFIKPLISPDA 181
>07_03_0961 -
22921761-22921850,22922204-22922338,22922409-22922531,
22922621-22922707,22922780-22922831,22922939-22923063,
22923724-22923932,22924206-22924407,22924526-22924630,
22925353-22925414,22925755-22925944,22926017-22926112,
22926203-22926305,22927019-22927122,22927264-22927395,
22928257-22928343,22929121-22929206,22929291-22929383,
22932197-22932284,22932402-22932514,22932621-22932743,
22934153-22934204,22934365-22934408,22934498-22934571,
22934655-22934746,22935594-22935661,22937146-22937221,
22937323-22937679
Length = 1055
Score = 91.9 bits (218), Expect = 6e-19
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+G + DP + GLAHF+EHM+F SEKYP E+ + +I + GGS NA T E T F+F++
Sbjct: 128 VGYFCDPEGLPGLAHFLEHMLFYASEKYPIEDSYSKYIAEHGGSRNAFTSREHTNFFFDV 187
Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
L A+D F+QFF++PLM +A
Sbjct: 188 NNDCLDDALDRFAQFFINPLMSPDA 212
>01_06_0459 +
29538025-29538579,29539190-29539354,29539448-29539585,
29539685-29539836,29539949-29540057,29540281-29540379,
29541051-29541116,29541208-29541315,29541428-29541553
Length = 505
Score = 56.4 bits (130), Expect = 3e-08
Identities = 30/90 (33%), Positives = 46/90 (51%)
Frame = +1
Query: 511 GSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEIQ 690
GS + G AHF+EHM F G+ + P N + I+ G NA T E TT++ ++Q
Sbjct: 88 GSRFELPGTNGTAHFLEHMAFKGTTRRPTANALEVEIENMGARLNAYTSREQTTYFADVQ 147
Query: 691 EKHLPHAMDMFSQFFVSPLMMKEACKGREK 780
+ +P A+D+ S P A + RE+
Sbjct: 148 GRDVPIALDVLSDILQYPCFPANALQ-RER 176
>03_02_0138 +
5837813-5838490,5839000-5839164,5839289-5839426,
5839496-5839647,5839754-5839862,5840551-5840649,
5840739-5840804,5840891-5840998,5841820-5841906
Length = 533
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/72 (34%), Positives = 42/72 (58%)
Frame = +1
Query: 511 GSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEIQ 690
GS + + G+AHFVEHM+F G+ + + I+ GG NA T E TT+Y ++
Sbjct: 130 GSRYETEDSAGVAHFVEHMLFKGTGD-RNAAQLEEEIENIGGHLNAYTSREQTTYYAKVL 188
Query: 691 EKHLPHAMDMFS 726
+K +P A+++ +
Sbjct: 189 DKDVPRALNILA 200
>06_03_0810 -
24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
+GS + + QG+AH +EH+ F+GS+K K + G NA TD T F+
Sbjct: 214 VGSIDEEEDEQGIAHMIEHVAFLGSKKREK-------LLGTGARSNAYTDFHHTVFHIHS 266
Query: 688 QEKHLPHAMDM 720
K + D+
Sbjct: 267 PTKTKEYGEDL 277
>01_07_0301 +
42607239-42607277,42607374-42607577,42607669-42607965,
42608055-42608222,42608393-42608560,42608653-42608733,
42608844-42608910,42609326-42609423,42609665-42609737,
42609826-42609896,42610013-42610062,42610145-42610257,
42610341-42610384
Length = 490
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/83 (24%), Positives = 42/83 (50%)
Frame = +1
Query: 511 GSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEIQ 690
GS + AE G++H +E + F + + + ++ GG+ AS E T + +E
Sbjct: 94 GSVYETAETAGVSHLLERLSFKDTA-HRSHLQIVQDVEATGGNIGASASREQTVYSYETL 152
Query: 691 EKHLPHAMDMFSQFFVSPLMMKE 759
+ +LP A+++ +PL +++
Sbjct: 153 KAYLPQAIEVLIDCVRNPLFLQD 175
>02_05_0833 +
32080845-32081118,32081483-32081663,32081825-32081999,
32082088-32082220,32082303-32082373,32082738-32082821,
32083106-32083196,32083315-32083835,32083932-32084096,
32084181-32084399,32084859-32084986,32085104-32085293,
32085478-32085561,32085643-32085740,32086127-32086391,
32086511-32086673,32086792-32086972,32087299-32087370,
32087473-32087614
Length = 1078
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 526 PAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIK 624
P G+ H +EH V GS KYP + F +K
Sbjct: 152 PKNSTGIPHILEHSVLCGSRKYPLKEPFVELLK 184
>01_05_0343 +
21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKEN--EF-DAFIKKKGGSDNASTDCEVTTF 675
+GS + + +G+AH VEH+ F + +Y + +F ++ + G NA T + T +
Sbjct: 86 VGSVVEEEDERGVAHIVEHLAFSATSRYTNHDIVKFLESIGAEFGACQNALTSSDETIY 144
>10_08_0648 + 19579299-19580618
Length = 439
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 407 GGKSVQSATSDHHGTT-RRNDFDEEKLAACALCVGWAATATQQKYRDWRISS 559
GG S +D + RR D E+ A+C GW A A + R W + S
Sbjct: 19 GGSDWASLPADLMSSVLRRLAGDRERARFGAVCKGWGAAAARLPSRPWLVGS 70
>09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757
Length = 817
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 745 AGSRRTG*TYPWHEVNASLVSQSRM*SLRNLSKRY 641
AG RR G PWH+V+ L ++ L N +R+
Sbjct: 400 AGLRRGGPREPWHDVHCRLEGRAAWDVLANFEQRW 434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,277,316
Number of Sequences: 37544
Number of extensions: 435649
Number of successful extensions: 1157
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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