Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00754
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical ...    92   5e-19
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ...    92   5e-19
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ...    92   5e-19
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ...    92   5e-19
Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    90   2e-18
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    90   2e-18
U55372-1|AAA98002.2|  816|Caenorhabditis elegans Hypothetical pr...    87   2e-17
U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical pr...    85   8e-17
U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical pr...    84   1e-16
Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical pr...    40   0.002
U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical p...    40   0.003
AL034489-10|CAA22464.2|  272|Caenorhabditis elegans Hypothetical...    30   2.3  
U23168-11|AAC38811.2|  454|Caenorhabditis elegans Hypothetical p...    29   4.1  
AF100670-2|AAN73857.3|  554|Caenorhabditis elegans Hypothetical ...    28   7.1  
AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical ...    28   9.4  

>AF016421-6|AAT92074.1|  984|Caenorhabditis elegans Hypothetical
           protein F44E7.4d protein.
          Length = 984

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP ENE+  F+    GS NA T  + T ++F++
Sbjct: 115 VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNYHFDV 174

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           +   LP A+D F QFF+SP   + A
Sbjct: 175 KPDQLPGALDRFVQFFLSPQFTESA 199


>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
           protein F44E7.4c protein.
          Length = 1008

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP ENE+  F+    GS NA T  + T ++F++
Sbjct: 56  VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNYHFDV 115

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           +   LP A+D F QFF+SP   + A
Sbjct: 116 KPDQLPGALDRFVQFFLSPQFTESA 140


>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
           protein F44E7.4a protein.
          Length = 1067

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP ENE+  F+    GS NA T  + T ++F++
Sbjct: 115 VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNYHFDV 174

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           +   LP A+D F QFF+SP   + A
Sbjct: 175 KPDQLPGALDRFVQFFLSPQFTESA 199


>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
           protein F44E7.4b protein.
          Length = 1051

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP ENE+  F+    GS NA T  + T ++F++
Sbjct: 115 VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYSKFLAAHAGSSNAYTSSDHTNYHFDV 174

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           +   LP A+D F QFF+SP   + A
Sbjct: 175 KPDQLPGALDRFVQFFLSPQFTESA 199


>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP ENE+  F+    G  NA+T  + T ++FE+
Sbjct: 56  VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYFKFLTAHAGRANANTATDHTNYFFEV 115

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           +   LP A+D F QFF+SP   + A
Sbjct: 116 KPDQLPGALDRFVQFFLSPQFTESA 140


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP ENE+  F+    G  NA+T  + T ++FE+
Sbjct: 56  VGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYFKFLTAHAGRANANTATDHTNYFFEV 115

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           +   LP A+D F QFF+SP   + A
Sbjct: 116 KPDQLPGALDRFVQFFLSPQFTESA 140


>U55372-1|AAA98002.2|  816|Caenorhabditis elegans Hypothetical
           protein C02G6.2 protein.
          Length = 816

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 39/84 (46%), Positives = 53/84 (63%)
 Frame = +1

Query: 511 GSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEIQ 690
           G   DP E+ GLAHF EHM+F+G+ KYP ENEF  F+    GS NA T+ + T ++F+++
Sbjct: 57  GHLMDPWELPGLAHFCEHMLFLGTSKYPLENEFTKFLSDNAGSYNACTEPDHTYYHFDVK 116

Query: 691 EKHLPHAMDMFSQFFVSPLMMKEA 762
              L  A+D F QFF+ P   K A
Sbjct: 117 PDQLYGALDRFVQFFLCPQFTKSA 140


>U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical
           protein C02G6.1 protein.
          Length = 980

 Score = 84.6 bits (200), Expect = 8e-17
 Identities = 37/85 (43%), Positives = 53/85 (62%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP ENE+  F+    G  NA T  + T ++F++
Sbjct: 56  VGHLMDPWELPGLAHFCEHMLFLGTAKYPTENEYSKFLTDNAGHRNAVTASDHTNYHFDV 115

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           +   L  A+D F QFF+SP   + A
Sbjct: 116 KPDQLRGALDRFVQFFLSPQFTESA 140


>U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical
           protein C28F5.4 protein.
          Length = 856

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 36/85 (42%), Positives = 53/85 (62%)
 Frame = +1

Query: 508 LGSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEI 687
           +G   DP E+ GLAHF EHM+F+G+ KYP E E+  ++    G  NA TD + T + FE+
Sbjct: 57  VGHLMDPWELPGLAHFCEHMLFLGTAKYPSEREYFKYLAANNGDSNAYTDTDHTNYSFEV 116

Query: 688 QEKHLPHAMDMFSQFFVSPLMMKEA 762
           + + L  A+D F+QFF+ P   + A
Sbjct: 117 RSEKLYGALDRFAQFFLDPQFTESA 141


>Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical
           protein ZC410.2 protein.
          Length = 458

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/77 (28%), Positives = 39/77 (50%)
 Frame = +1

Query: 511 GSYSDPAEIQGLAHFVEHMVFMGSEKYPKENEFDAFIKKKGGSDNASTDCEVTTFYFEIQ 690
           GS  +  +  G AHF+EHM F G+ +  +    +  ++  G   NA T  E TT+Y +  
Sbjct: 60  GSRYENEKNNGTAHFLEHMAFKGTPRRTRMG-LELEVENIGAHLNAYTSRESTTYYAKCF 118

Query: 691 EKHLPHAMDMFSQFFVS 741
            + L  ++D+ S   ++
Sbjct: 119 TEKLDQSVDILSDILLN 135


>U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical
           protein C05D11.1 protein.
          Length = 995

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +1

Query: 541 GLAHFVEHMVFMGSEKYPKENEFDAFIKK-KGGSDNASTDCEVTTF 675
           GL H +EH+VFMGS+KYP +   D    +      NA TD + T +
Sbjct: 57  GLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADGTNAWTDTDHTAY 102


>AL034489-10|CAA22464.2|  272|Caenorhabditis elegans Hypothetical
           protein Y7A5A.3 protein.
          Length = 272

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -3

Query: 668 VTSQSVEALSEPPFFFMKASNSFSLGYFS-LPIN-TICSTKCANPCISAGSL*LPSQHRG 495
           + S    A+SE   FF   +N F+  YF  +P+  ++ +T C N   +     +P QH  
Sbjct: 113 INSSFKSAISEDVIFFSNKTNIFTSQYFGYVPVTLSLHATSCTNQIKTDKITDIPKQHSN 172

Query: 494 R 492
           +
Sbjct: 173 K 173


>U23168-11|AAC38811.2|  454|Caenorhabditis elegans Hypothetical
           protein B0228.8 protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 509 WAATATQQKYRDWRISSNIWCLWEAKNIPKKMSSMPS 619
           WA +AT  K +     + +  L E KNIPKK S  P+
Sbjct: 162 WAMSATLNKKKGHFCINTLHMLSECKNIPKKPSLEPA 198


>AF100670-2|AAN73857.3|  554|Caenorhabditis elegans Hypothetical
           protein M4.1 protein.
          Length = 554

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 476 LHQSHFALWFRDGHWW 429
           L ++H  LWFRDG +W
Sbjct: 54  LSRNHAILWFRDGEFW 69


>AC024799-9|AAK72312.1|  293|Caenorhabditis elegans Hypothetical
           protein Y49C4A.1 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 696 LLLYLKVECSHFAICRSVI 640
           L++YL + CS+ A CRS+I
Sbjct: 81  LIVYLALPCSNIAACRSII 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,513,418
Number of Sequences: 27780
Number of extensions: 387248
Number of successful extensions: 1154
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)