Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00753
(291 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 140 7e-33
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 128 3e-29
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 124 3e-28
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 105 1e-22
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 105 1e-22
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 103 1e-21
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 91 4e-18
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 89 2e-17
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 73 9e-13
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 71 5e-12
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 67 8e-11
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 66 1e-10
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 63 1e-09
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 63 1e-09
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 59 2e-08
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 58 3e-08
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 57 9e-08
UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa... 44 6e-04
UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169, w... 44 9e-04
UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1; ... 43 0.001
UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative; ... 43 0.001
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 42 0.003
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 41 0.005
UniRef50_Q4N637 Cluster: Putative uncharacterized protein; n=1; ... 34 0.69
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 34 0.69
UniRef50_UPI000049880F Cluster: hypothetical protein 63.t00025; ... 33 0.92
UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora cras... 33 1.6
UniRef50_A6DNV3 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_A5TRI2 Cluster: Sensor protein; n=1; Fusobacterium nucl... 31 3.7
UniRef50_Q10488 Cluster: Probable trans-2-enoyl-CoA reductase, m... 31 3.7
UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4; ... 31 4.9
UniRef50_A5GSE8 Cluster: Permease of the major facilitator super... 31 4.9
UniRef50_Q22MP7 Cluster: ATPase, histidine kinase-, DNA gyrase B... 31 4.9
UniRef50_Q9ZH92 Cluster: Decorin binding protein A; n=9; Borreli... 31 6.5
UniRef50_Q7BKZ0 Cluster: NifN-B; n=3; Clostridium beijerinckii|R... 31 6.5
UniRef50_UPI00006CB17F Cluster: hypothetical protein TTHERM_0029... 30 8.5
UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Se... 30 8.5
UniRef50_O66534 Cluster: Riboflavin biosynthesis protein ribD [I... 30 8.5
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 140 bits (338), Expect = 7e-33
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 71
MPREIKDIKDFL+KARRKDAKSVKIKKN +NVKFKVRCSRFLYTLVITDKEKAEKLKQSL
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 60
Query: 70 PPGLQVKEVK 41
PPGLQVKEVK
Sbjct: 61 PPGLQVKEVK 70
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 128 bits (308), Expect = 3e-29
Identities = 60/70 (85%), Positives = 67/70 (95%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 71
MPR+I++IKDFL+ ARRKDAKSVKIKKN +NVKFKVRCSR+LYTLVITDKEKAEKLKQSL
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60
Query: 70 PPGLQVKEVK 41
PPGL VKE+K
Sbjct: 61 PPGLAVKELK 70
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 124 bits (300), Expect = 3e-28
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 71
MP+EIK+IKDFL+KARRKDAKSVKIKKN N KFKVRC+ +LYTLV+ DK+KAEKLKQSL
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSL 60
Query: 70 PPGLQVKEVK 41
PPG+QVKE+K
Sbjct: 61 PPGIQVKELK 70
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 105 bits (253), Expect = 1e-22
Identities = 51/69 (73%), Positives = 61/69 (88%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 71
+PREI++IKDFL+ A+RKDAKSVKIKKN +NVKFKVRCSR LYTLVITDKEKAEKLKQ L
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ-L 75
Query: 70 PPGLQVKEV 44
+Q++ +
Sbjct: 76 KKAVQIQRL 84
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 105 bits (253), Expect = 1e-22
Identities = 47/69 (68%), Positives = 62/69 (89%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 71
MP++I +IKDFL+ ARRKDA+SVKIK++ + VKFKVRCSR+LYTL + D+EKA+KLKQSL
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60
Query: 70 PPGLQVKEV 44
PPGL V+++
Sbjct: 61 PPGLSVQDL 69
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 103 bits (246), Expect = 1e-21
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = -3
Query: 202 RKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 41
RKDAKSVKIKKN +NVKFKVRCS++LYTLVITDKEKAEKLKQSLPPGL VKE+K
Sbjct: 366 RKDAKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGLSVKELK 419
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 91.1 bits (216), Expect = 4e-18
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPEN--VKFKVRCSRFLYTLVITDKEKAEKLKQ 77
MP E+ DIK F+ RRKDA S +IK+N + +KFKVRC RFLYTLV+ D +KA+KLKQ
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQ 60
Query: 76 SLPPGLQVKEV 44
SLPP L++ +V
Sbjct: 61 SLPPSLKIADV 71
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 88.6 bits (210), Expect = 2e-17
Identities = 38/65 (58%), Positives = 52/65 (80%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 71
MPREIK +K+FL RKDA+ VK+K NP KFKVRCSR+LYTLV+ DK+KA+K+++S+
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLYTLVVNDKKKADKIERSI 60
Query: 70 PPGLQ 56
P ++
Sbjct: 61 HPSVK 65
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 73.3 bits (172), Expect = 9e-13
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNP---------ENVKFKVRCSRFLYTLVITDKE 98
M REIKDIK+F+ ARR D KS +K N + KFKVR SR+ YTLV+ D
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKALNANGKKIKQTKFKVRGSRYQYTLVVNDAA 60
Query: 97 KAEKLKQSLPPGLQVKEV 44
KA+KL+QSLPP L++K +
Sbjct: 61 KAKKLQQSLPPTLEIKNL 78
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 70.9 bits (166), Expect = 5e-12
Identities = 28/69 (40%), Positives = 48/69 (69%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 71
MP+++++ K L + ++V++K N EN KFKVRC+++LYT + DK KAE+LK+++
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLYTYICADKAKAEELKKAI 60
Query: 70 PPGLQVKEV 44
P + V E+
Sbjct: 61 PKDIHVVEI 69
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 66.9 bits (156), Expect = 8e-11
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = -3
Query: 238 IKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 59
+ IKDFL R D +SV +K + + KFK+RC R LYTL + D+ KA+K+ QSLP +
Sbjct: 18 LTSIKDFLATCSRDDVESVTVKYSANDTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSI 77
Query: 58 QVKEV 44
++ ++
Sbjct: 78 KIIKI 82
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 66.5 bits (155), Expect = 1e-10
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPE-----NVKFKVRCSRFLYTLVITDKEKAEK 86
MP+E+KD+KD+L +R DAKSV + K + KFKVRCSR+LYT + ++ KA K
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAK 60
Query: 85 LKQSLPPGLQVKEV 44
++ ++P L+ K +
Sbjct: 61 VEATIPSNLEKKVI 74
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 63.3 bits (147), Expect = 1e-09
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 98
M +EI DIK+FL RR+D S +K N + KFK+R SR+LYTL++ D
Sbjct: 1 MAKEIADIKEFLELIRRQDVNSATVKINKKLNKNGKAFRQTKFKLRGSRYLYTLIVNDAG 60
Query: 97 KAEKLKQSLPPGLQVKEV 44
KA+KL QSLPP V ++
Sbjct: 61 KAKKLLQSLPPTFNVNKL 78
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 62.9 bits (146), Expect = 1e-09
Identities = 39/78 (50%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 98
M REI DIK FL RR D K+ +K N + KFKVR S LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 97 KAEKLKQSLPPGLQVKEV 44
KA+KL QSLPP L+V +
Sbjct: 61 KAKKLIQSLPPTLKVNRL 78
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 59.3 bits (137), Expect = 2e-08
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = -3
Query: 253 NMPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 77
+MP+++ K+FL A R DAK VK+KK + EN KFK+R +++LYTL + K E ++
Sbjct: 24 SMPKQVTTPKEFLALAARSDAKWVKVKKSSDENTKFKLRTTKYLYTLTVKPK-FVELVQN 82
Query: 76 SLPPGLQV 53
S+P L+V
Sbjct: 83 SIPESLEV 90
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 58.4 bits (135), Expect = 3e-08
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 74
MP+++ K+FL A R DAK VK+KK N + KFK+R ++FLYTLV+ K E ++ S
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKKVNDDLTKFKLRTTKFLYTLVVKPK-FVELVQNS 59
Query: 73 LPPGLQV 53
+P L+V
Sbjct: 60 IPESLEV 66
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 56.8 bits (131), Expect = 9e-08
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSV-------KIKKNPENVKFKVRCSRFLYTLVITDKEKA 92
MP++I DI+ FL +R+ D +V K KKN K K+R ++LYT+V DK+KA
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTKKNTIITKLKLRTKKYLYTMVFADKKKA 60
Query: 91 EKLKQSLPPGLQ 56
E+++ SL P L+
Sbjct: 61 ERIENSLLPSLK 72
>UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0546700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 94
Score = 44.0 bits (99), Expect = 6e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = -2
Query: 251 HAA*NQRYQRLFN*GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 93
HA + R Q L GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 16 HAEADPRDQGLPPDGEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 68
>UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_169,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 177
Score = 43.6 bits (98), Expect = 9e-04
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Frame = -3
Query: 250 MPREIKDIKDFLI-----KARRKDA-----KSVKIKKNPENVKFKVRCSRFLYTLVITDK 101
MP+EI+D+K+FL +A+ KDA K++ IK++ + KFK+R ++L+T DK
Sbjct: 1 MPKEIQDVKEFLSLMKGSEAQGKDANKEPKKNLYIKESKKITKFKLRGKKYLFTFKTADK 60
Query: 100 EKAEKLKQSLP 68
KA + + P
Sbjct: 61 NKASRNSINTP 71
>UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 89
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Frame = -3
Query: 250 MPREIKDIKDFL-IKARRKDA-------KSVKIKKNPENVKFKVRCSRFLYTLVITDKEK 95
MP+EI DIK F+ + KD K V +K N KFK+R ++LYT D +
Sbjct: 1 MPKEITDIKKFMKLWQNNKDTPATAGAKKVVYVKTNKRITKFKLRGKKYLYTFKTADPKI 60
Query: 94 AEKLKQSLPPGLQVKEVK 41
A+ +K ++P E+K
Sbjct: 61 AKGIKDAIPATYSKIEIK 78
>UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-1, putative - Trichomonas vaginalis G3
Length = 93
Score = 42.7 bits (96), Expect = 0.001
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 74
MP+++ + F+ + DAK+V I + N E KFK++ ++ LYTL + E +++ S
Sbjct: 1 MPKQVLTARQFVERCMAPDAKNVVILRVNDETAKFKLKTTKQLYTLTVKKGELIQQVIDS 60
Query: 73 LP 68
LP
Sbjct: 61 LP 62
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = -2
Query: 209 GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 93
GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 15 GEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 53
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = -3
Query: 250 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 77
MP E+K +F+ R A ++K+ + VK K R R+LYTL + +++AE L+Q
Sbjct: 1 MPVELKSFDEFVKVVER--AVECRVKRGKDVVKIKARTKRYLYTLKVPPEKEAEVLEQ 56
>UniRef50_Q4N637 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 74
Score = 33.9 bits (74), Expect = 0.69
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 2 IFYFFYFINLVTS---LYFFNLETWR*TLLKFLSLLFVSDDQGVQEP*ASNLELDI 160
+F F F ++V+S +YF+ L T LL + LLF+S D V +P SN E ++
Sbjct: 14 VFLFLLFFSVVSSKPWIYFWGLLTALCLLLFLVDLLFISSDSIVFDPFYSNWETNM 69
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 33.9 bits (74), Expect = 0.69
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -1
Query: 153 SSRFDAQGSCTPWSSLTKRRLRNLSR 76
SSR DA +CTP S+T RRLR+ SR
Sbjct: 114 SSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_UPI000049880F Cluster: hypothetical protein 63.t00025;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 63.t00025 - Entamoeba histolytica HM-1:IMSS
Length = 1005
Score = 33.5 bits (73), Expect = 0.92
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -3
Query: 268 KTIRLNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKV-RCSRFLYTLVITDKEKA 92
K I+L EIK+ + A+ K+ KS++ +KN EN KV R R + + I D K
Sbjct: 675 KIIKLGTEEEIKEFNE----AKEKEMKSIEERKNKENKTKKVERKKRRVDDIDIKDTNKE 730
Query: 91 EKLKQSLPPGLQVKEVK*CN*VNE 20
E+ K+ + L +VK N + E
Sbjct: 731 ER-KRRIETFLNEVKVKKLNELKE 753
>UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1007
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -1
Query: 213 LRRGGKTPNRSK*RRTLRMSSSRFDAQGSCTPWSSLTKRRLRNLSRVYLQVSK 55
L+ G +TP RS + + RMS SR DA+ + SS++ S+ + S+
Sbjct: 280 LKEGDQTPERSDSKSSNRMSRSRSDARSKLSKVSSVSSEATETQSQTFTSQSR 332
>UniRef50_A6DNV3 Cluster: Putative uncharacterized protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: Putative
uncharacterized protein - Lentisphaera araneosa HTCC2155
Length = 689
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = -3
Query: 241 EIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPG 62
++ D++ F D ++ + +P V ++ L L++++K+ E K +PPG
Sbjct: 622 KVADLRSFPAFFTSLDVPNLDLSLSPVKVTQEILGMNKLKNLILSEKQFKETKKLKIPPG 681
Query: 61 LQV 53
LQ+
Sbjct: 682 LQI 684
>UniRef50_A5TRI2 Cluster: Sensor protein; n=1; Fusobacterium
nucleatum subsp. polymorphum ATCC 10953|Rep: Sensor
protein - Fusobacterium nucleatum subsp. polymorphum
ATCC 10953
Length = 623
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 11 FFYFINLVTSLYFFNLETWR*TLLKFLSLLFV 106
F FI +V +YFFN+E LLKFL +F+
Sbjct: 13 FLIFIFVVLFIYFFNIEISLNNLLKFLLFIFL 44
>UniRef50_Q10488 Cluster: Probable trans-2-enoyl-CoA reductase,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Probable trans-2-enoyl-CoA reductase,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 372
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = -3
Query: 190 KSVKIKKN-PENVKFKVRCSRFLYTLVITDKEKAEK--LKQSLPPGLQVKEVK 41
KS+ + +N P+ K K + T+VITD+E ++ +KQ +P +Q EVK
Sbjct: 200 KSINVVRNRPDIEKLKEQLKSLGATIVITDEELMDRKTMKQKVPEWIQGGEVK 252
>UniRef50_Q5X081 Cluster: Putative uncharacterized protein; n=4;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 445
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 160 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 44
N+++ V C R YTL D E++K+ L L++ E+
Sbjct: 51 NIEYSVLCQRLKYTLSSLDYSSPEQIKEQLIDALKLAEL 89
>UniRef50_A5GSE8 Cluster: Permease of the major facilitator
superfamily; n=1; Synechococcus sp. RCC307|Rep: Permease
of the major facilitator superfamily - Synechococcus sp.
(strain RCC307)
Length = 522
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 146 LELDILRVLLYFDRFGVFPPRLN*KVFDIFDF 241
L ++ V+L+F RF PP LN KVF +F
Sbjct: 238 LTFSLIHVILFFIRFASSPPLLNPKVFSDINF 269
>UniRef50_Q22MP7 Cluster: ATPase, histidine kinase-, DNA gyrase B-,
and HSP90-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: ATPase, histidine
kinase-, DNA gyrase B-, and HSP90-like domain containing
protein - Tetrahymena thermophila SB210
Length = 1052
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/41 (29%), Positives = 28/41 (68%)
Frame = -3
Query: 274 WLKTIRLNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVK 152
+++ IRL++P K ++DF+++ AK +K++++ N+K
Sbjct: 285 FMQKIRLDIPNSKKTLRDFILEKHHAIAKEIKVRQD-MNIK 324
>UniRef50_Q9ZH92 Cluster: Decorin binding protein A; n=9; Borrelia
burgdorferi group|Rep: Decorin binding protein A -
Borrelia afzelii
Length = 181
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 181 KIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQS 74
K+ +NP +K K+R + + KE+AEKLK+S
Sbjct: 67 KVAENPFIIKAKIRTTSVALKFIQAIKEEAEKLKES 102
>UniRef50_Q7BKZ0 Cluster: NifN-B; n=3; Clostridium beijerinckii|Rep:
NifN-B - Clostridium beijerinckii (Clostridium MP)
Length = 896
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 271 LKTIRLNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKA 92
+K R+N+PR ++D +FL KI NP K+K + R+L ++ + K A
Sbjct: 254 VKNFRINVPRGLRDTDNFL-------KVLAKISGNPIPEKYKKQRGRYLDAMIDSHKYNA 306
Query: 91 E 89
E
Sbjct: 307 E 307
>UniRef50_UPI00006CB17F Cluster: hypothetical protein
TTHERM_00299790; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00299790 - Tetrahymena
thermophila SB210
Length = 303
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/74 (25%), Positives = 40/74 (54%)
Frame = -3
Query: 271 LKTIRLNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKA 92
+KT+R + EIK K+ L++++++D + + +K+ EN + +F T++ KE+
Sbjct: 132 VKTLRDQLSLEIKRSKENLLQSKKQDQEEI-MKQRKENEQM---IKQFSGTVIEKKKEQI 187
Query: 91 EKLKQSLPPGLQVK 50
++K Q K
Sbjct: 188 NRVKNDKEISYQTK 201
>UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Sel1
repeat family - Vibrio harveyi HY01
Length = 326
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 181 KIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 80
KIK PEN K + C+ F YT KA KL+
Sbjct: 257 KIKGQPENQKLLIACAMFGYTPQTIPDSKAVKLR 290
>UniRef50_O66534 Cluster: Riboflavin biosynthesis protein ribD
[Includes: Diaminohydroxyphosphoribosylaminopyrimidine
deaminase (EC 3.5.4.26) (Riboflavin-specific deaminase);
5-amino-6-(5- phosphoribosylamino)uracil reductase (EC
1.1.1.193) (HTP reductase)]; n=1; Aquifex aeolicus|Rep:
Riboflavin biosynthesis protein ribD [Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(EC 3.5.4.26) (Riboflavin-specific deaminase);
5-amino-6-(5- phosphoribosylamino)uracil reductase (EC
1.1.1.193) (HTP reductase)] - Aquifex aeolicus
Length = 356
Score = 30.3 bits (65), Expect = 8.5
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = -3
Query: 238 IKDIKDFLIKARRKDAKSVKIKKNPE---NVKFKVRCSRFLYTLVITDKE--KAEKLKQS 74
IKD ++ + + V+I +PE + KV + T+VIT KE KAEKLK+
Sbjct: 201 IKDDPHLTVRFVPTEKQPVRIILDPELEVPLSAKVLNTEEAPTIVITKKENEKAEKLKEK 260
Query: 73 LPPGLQVKEVK*CN*VNEIKKIE 5
G+QV +K N N +KK++
Sbjct: 261 ---GVQVLILKGFNLKNILKKLK 280
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,676,635
Number of Sequences: 1657284
Number of extensions: 4160486
Number of successful extensions: 12752
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 12447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12724
length of database: 575,637,011
effective HSP length: 74
effective length of database: 452,997,995
effective search space used: 9965955890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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