Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00752
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 175 2e-44
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 162 2e-40
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 4e-40
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 141 4e-34
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 131 6e-31
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 125 4e-29
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 114 6e-26
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 107 8e-24
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 95 6e-20
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 84 9e-17
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 77 2e-14
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 72 4e-13
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 70 2e-12
SB_214| Best HMM Match : Arf (HMM E-Value=0) 68 6e-12
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 43 2e-04
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 40 0.002
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 38 0.006
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 38 0.008
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 38 0.008
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 38 0.010
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 37 0.014
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 36 0.024
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 36 0.041
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 35 0.055
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 35 0.072
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 33 0.22
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 33 0.22
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 33 0.29
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 32 0.51
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 31 1.2
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 29 3.6
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 29 3.6
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 29 4.8
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 29 4.8
SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_14988| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-08) 28 6.3
SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 175 bits (427), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +1
Query: 256 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELM 435
IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER+GEAREEL
Sbjct: 49 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELN 108
Query: 436 RMLSEDELRDAVLLIFANKQDLPN 507
RML+EDELRDAVLL+FANKQDLPN
Sbjct: 109 RMLNEDELRDAVLLVFANKQDLPN 132
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +3
Query: 510 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 647
MNAAEITDKLGLHSLRNR WYIQATCATSGDGLYEGLDWLSN LK+
Sbjct: 134 MNAAEITDKLGLHSLRNRQWYIQATCATSGDGLYEGLDWLSNTLKS 179
Score = 91.9 bits (218), Expect = 5e-19
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = +2
Query: 113 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPIL 259
MG MFA LF GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIP +
Sbjct: 1 MGGMFAKLFAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 162 bits (394), Expect = 2e-40
Identities = 74/79 (93%), Positives = 77/79 (97%)
Frame = +1
Query: 259 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMR 438
GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER GEA+EEL R
Sbjct: 499 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSR 558
Query: 439 MLSEDELRDAVLLIFANKQ 495
ML+EDELRDAVLL+FANKQ
Sbjct: 559 MLAEDELRDAVLLVFANKQ 577
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 161 bits (392), Expect = 4e-40
Identities = 71/84 (84%), Positives = 80/84 (95%)
Frame = +1
Query: 256 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELM 435
IGFNVE+VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRER+ E++EEL
Sbjct: 49 IGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELN 108
Query: 436 RMLSEDELRDAVLLIFANKQDLPN 507
+ML EDEL+DAV+L+ ANKQDLPN
Sbjct: 109 KMLQEDELKDAVVLVMANKQDLPN 132
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +2
Query: 113 MGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPIL 259
MG ++LF LFGKK+MRILMVGLDAAGKTTILYKLKLGEIVTTIP +
Sbjct: 1 MGLTISSLFTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = +3
Query: 510 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 641
++ +EIT+KLGL S+R+R WYIQA CAT G GLYEGLDWLSN+L
Sbjct: 134 LSVSEITEKLGLQSIRDRQWYIQAACATQGTGLYEGLDWLSNEL 177
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 141 bits (342), Expect = 4e-34
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +1
Query: 256 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELM 435
IGFNVE VEYKNI FTVWD+GGQDKIR LWR YFQ TQGLIFVVDSNDR+RI EA+EEL
Sbjct: 122 IGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELF 181
Query: 436 RMLSEDELRDAVLLIFANKQDLPN 507
++L E+EL+ A LL+ ANKQDLP+
Sbjct: 182 KLLKEEELKRAALLVLANKQDLPD 205
Score = 71.7 bits (168), Expect = 5e-13
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = +3
Query: 510 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 644
M+ E+++KL LH+LR+RNWYIQATCA G G+YEGL+WL+ Q++
Sbjct: 207 MSTTELSEKLSLHTLRSRNWYIQATCALKGQGVYEGLEWLAQQIQ 251
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +2
Query: 110 KMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPIL 259
KMGN +LF+ L GK E+R+LMVGLDAAGKTTILY LKL E V TIP +
Sbjct: 73 KMGNSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTI 122
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 131 bits (316), Expect = 6e-31
Identities = 58/84 (69%), Positives = 70/84 (83%)
Frame = +1
Query: 256 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELM 435
+GFNVETV YKNISFTVWD+GGQDKIR LWR Y+Q QG+IFVVDS DRER EAR EL
Sbjct: 28 LGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELH 87
Query: 436 RMLSEDELRDAVLLIFANKQDLPN 507
++L+E+EL+ +LL+ ANKQD+ N
Sbjct: 88 KLLAEEELQQVILLVIANKQDMAN 111
Score = 65.3 bits (152), Expect = 4e-11
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = +3
Query: 501 AKRMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 647
A M A+EI +KL L+ +R R W++Q+ CA G+GL+EGLDW++ Q++N
Sbjct: 110 ANAMTASEIREKLKLNEIRGRPWFVQSACAVKGEGLFEGLDWMATQIRN 158
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 176 MVGLDAAGKTTILYKLKLGEIVTTIPIL 259
M+GLD AGKTTILY+LKL E+V+T+P L
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVPTL 28
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 125 bits (301), Expect = 4e-29
Identities = 56/85 (65%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL 432
IGFNVET++ KN++ T+WDVGGQDKIRPLWRHYFQ T+GL+FVVDS+D R+ EA+EEL
Sbjct: 51 IGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEEL 110
Query: 433 MRMLSEDELRDAVLLIFANKQDLPN 507
+L DE RD +++ ANKQDLPN
Sbjct: 111 HGVLDSDEFRDVPVVVVANKQDLPN 135
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +2
Query: 149 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPIL 259
FG +++RI+M+GLDAAGKTTILYKLKL E V+TIP +
Sbjct: 15 FGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIPTI 51
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 510 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 656
+ A E+ LGL + W++Q CAT+GDGLYE +D + +K+ ++
Sbjct: 137 LKAGEMAKHLGLLQHKRNPWHVQEACATNGDGLYEAMDHMVRMVKDFHK 185
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 114 bits (275), Expect = 6e-26
Identities = 52/83 (62%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 IGFNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL 432
+ FNVET+ KNI+F+VWD+GGQDKIR LWRHYFQ +G+IFVVDS D+ERI E REEL
Sbjct: 141 VAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREEL 200
Query: 433 MRMLSEDELRDAVLLIFANKQDL 501
R+L EL +++ ANKQDL
Sbjct: 201 TRVLQHSELNGVPVVVVANKQDL 223
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 522 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLS 632
++ ++L L+ W IQ TCAT+GDGLYE ++ L+
Sbjct: 231 KMAEELSLYKHTKNPWRIQGTCATAGDGLYEAMEALA 267
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2
Query: 200 KTTILYKLKLGEIVTTIPILA 262
KTTILYKLKL E V T+P +A
Sbjct: 122 KTTILYKLKLKETVNTVPTVA 142
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 107 bits (257), Expect = 8e-24
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +1
Query: 310 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFAN 489
DVGGQDKIRPLWRHYF +QGLIFVVD DR+RI EAR+EL R++++ E++D ++LIFAN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 490 KQDLPN 507
KQDLP+
Sbjct: 203 KQDLPD 208
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -2
Query: 450 FAEHPHELFACLADTFPIVTVYYED*TLCILEIMPPQWSDFVLASNIPHSKTNVF 286
F L + L +T PI T+Y ED L +M PQ +DFVL+SNI K ++
Sbjct: 70 FQARTQGLCSGLINTVPICTIYNEDEALGTGVVMAPQRTDFVLSSNILRDKKKLY 124
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 94.7 bits (225), Expect = 6e-20
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 FNVETVE-YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMR 438
FNVET+ +K I F VWD+GG+++ RPLW+ Y + T +I+VVDS ++ EAR+EL
Sbjct: 55 FNVETIRPFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFN 114
Query: 439 MLSEDELRDAVLLIFANKQDLPN 507
+L+ +L A +LIFANKQD PN
Sbjct: 115 LLNSAQLNGAPILIFANKQDCPN 137
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +2
Query: 113 MGNMFANLFKG----LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPILA 262
MGNMF F+ L K+ ++M+GLD +GKT+ILY+ K E V T+P A
Sbjct: 1 MGNMFVVSFRRFRPMLKLKRPFHVVMLGLDKSGKTSILYRNKFREYVNTVPTTA 54
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 522 EITDKLGLHSLRNRN-WYIQATCATSGDGLYEGLDWLSNQL 641
EIT L LH L R+ W++Q A G+GL +GL LS +
Sbjct: 143 EITHMLSLHDLNARHLWFVQPCSALLGEGLLDGLRALSEMI 183
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/63 (55%), Positives = 50/63 (79%)
Frame = +1
Query: 313 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANK 492
+ GQ IRP WR Y+ NT +I+VVDS D++RIG +++EL+ ML EDEL+ A+L++FANK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 493 QDL 501
QD+
Sbjct: 213 QDM 215
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/39 (41%), Positives = 28/39 (71%)
Frame = +3
Query: 510 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDW 626
M+++E+++ LGL +L++R W I T A G+GL E ++W
Sbjct: 219 MSSSEVSNALGLSALKSRTWAIFKTSAVKGEGLDEAMEW 257
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 76.6 bits (180), Expect = 2e-14
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +1
Query: 256 IGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELM 435
+GFN+ V N++ VWD+GGQ + R +W Y + ++++VD+ D +++ ++ EL
Sbjct: 53 VGFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELH 112
Query: 436 RMLSEDELRDAVLLIFANKQDLPN 507
+L + +L +L+ NK+DLPN
Sbjct: 113 NLLEKPQLAGIPILVLGNKKDLPN 136
Score = 34.7 bits (76), Expect = 0.072
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 137 FKGLFGKKEMRILMVGLDAAGKTTILYKLKLGE 235
FK LF K+EM + +VGL +GKTT + + G+
Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQ 44
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = +1
Query: 259 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMR 438
GFNV + ++ +W++GG +K R W ++ +TQ L++VVDS+D +R E+R+ L
Sbjct: 202 GFNVVCLTTDGLNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKS 261
Query: 439 MLSEDELRDAVLLIFANKQDLP 504
+LS L +L+ A+KQDLP
Sbjct: 262 LLSNSLLNGVPVLLVASKQDLP 283
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 161 EMRILMVGLDAAGKTTILYKLKLGE 235
E RIL++GLD +GK+ L L G+
Sbjct: 166 EKRILVLGLDGSGKSVFLSALSQGD 190
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +1
Query: 286 KNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRERIGEAREELMRMLSEDELR 462
KN+ F VWD+GGQ +R +HYF + GLI+VVDS D +R+ EA +L+ +L E +
Sbjct: 16 KNVHFAVWDIGGQPNLR---KHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMV 70
Query: 463 DAVLLIFANKQDLPN 507
D +++ ANKQDLPN
Sbjct: 71 DVPVVVVANKQDLPN 85
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 510 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSN 635
+ A +I + LGL L+ ++Q A++GDGL E WL N
Sbjct: 87 LKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGLCEAHKWLPN 128
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 70.1 bits (164), Expect = 2e-12
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 259 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 369
GFNVETVE++++ FT+WDVGG K+RPLWRHY+ NTQ
Sbjct: 222 GFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 68.1 bits (159), Expect = 6e-12
Identities = 27/78 (34%), Positives = 49/78 (62%)
Frame = +1
Query: 271 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE 450
E + + FT +D+GG + R +W+ YF G++F++D D ER+ E+++EL +L++
Sbjct: 13 EELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLAD 72
Query: 451 DELRDAVLLIFANKQDLP 504
++L +LI NK D+P
Sbjct: 73 EQLSSCPVLILGNKIDIP 90
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 64.1 bits (149), Expect = 1e-10
Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Frame = +1
Query: 259 GFNVETVEYKN-ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELM 435
GFN+++V+ K VWD+GGQ KIRP W++YF+NT L EL
Sbjct: 50 GFNIKSVQSKGGFRLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELD 92
Query: 436 RMLSEDELRDAVLLIFANKQDLPNE*TQPR*QTN----------WVCIRCATVTGTSKRH 585
+L E++L LL+FANKQDL N T +N W C+ +TG +H
Sbjct: 93 ELLEEEKLIGVPLLVFANKQDLMNAATPAEISSNLGLNTIRSRGWQIQGCSALTGEGVQH 152
Query: 586 A 588
+
Sbjct: 153 S 153
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 519 AEITDKLGLHSLRNRNWYIQATCATSGDGL 608
AEI+ LGL+++R+R W IQ A +G+G+
Sbjct: 121 AEISSNLGLNTIRSRGWQIQGCSALTGEGV 150
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 158 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIP 253
+EMRIL++GLD +GKTTIL L +++ P
Sbjct: 16 REMRILLLGLDNSGKTTILKSLASEDVLHITP 47
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +1
Query: 304 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 453
+WDVGGQ +R WR+YF++T GLI+VVDS D+ R+ + + EL +L E+
Sbjct: 6 IWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = +1
Query: 274 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 453
TVE +WD GQ++ R L Y++ QG+I V D+N RE + E L +
Sbjct: 51 TVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYS 110
Query: 454 ELRDAVLLIFANKQD 498
+D V ++ NK D
Sbjct: 111 TKKDIVKMLVGNKID 125
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 429
+ F + T+E K I +WD GQ++ R + Y++ G+I V D D+E ++
Sbjct: 64 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 123
Query: 430 LMRMLSEDELRDAVLLIFANKQDL 501
L + + L+ NK DL
Sbjct: 124 LQE-IDRYACENVNKLLVGNKCDL 146
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 11/89 (12%)
Frame = +1
Query: 268 VET-VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRML 444
VET +K++ F ++DVGGQ R W H F+ +IF V + + + EE+ RM+
Sbjct: 185 VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMM 244
Query: 445 SEDELRDAV----------LLIFANKQDL 501
+L D++ +++F NK+DL
Sbjct: 245 ESMKLFDSICNNKWFTDTSIILFLNKKDL 273
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 429
+ F ++TV+ + + +WD GQ++ R + + Y+ N G+I D +++ E+ +
Sbjct: 42 VDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSF-ESLPQ 100
Query: 430 LMRMLSEDELRDAVLLIFANKQDL 501
+ + +D ++ I NK DL
Sbjct: 101 WLDDTNRYTSKDVLIAIVGNKSDL 124
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +1
Query: 274 TVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSED 453
TV+ K I +WD GQ++ R L Y+++ G++ + D N+ E + + +SE
Sbjct: 51 TVDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHL-SQWLEEVSEY 109
Query: 454 ELRDAVLLIFANKQDL 501
++ NK DL
Sbjct: 110 ACEGVNTILVGNKCDL 125
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 259 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREEL-- 432
G + V K++ +WD GQ++ R + R Y++ G + V D + RE L
Sbjct: 133 GSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTD 192
Query: 433 MRMLSEDELRDAVLLIFANKQDL 501
R L+ + V+++ NK+DL
Sbjct: 193 ARTLASPNI---VIILVGNKKDL 212
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 IGFNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 429
+ F + T+ + + +WD GQ++ R + Y++ T G+I V D + +
Sbjct: 12 VDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRW 71
Query: 430 LMRMLSEDELRDAVLLIFANKQDLPNE 510
L + + D + ++ NK D P++
Sbjct: 72 LHEI--DQNCDDVIRILVGNKDDCPSK 96
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +2
Query: 107 FKMGNMFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLK 226
F+M + + L+K LF K E IL++GLD AGKTT+L ++K
Sbjct: 3 FEMFTLLSGLWKYLFQKDEYFILILGLDNAGKTTLLEQIK 42
Score = 34.3 bits (75), Expect = 0.096
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 256 IGFNVETVEYKNISFTVWDVGGQDKIRPLW 345
+G N+ + ++ WD+GGQ ++R LW
Sbjct: 61 VGLNIGKITISHVKLMFWDLGGQQELRTLW 90
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +1
Query: 241 NNNSHIGFNVET----VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER 408
N++S +G +V T + + WD GQ+K R + + Y++N +I V D +R
Sbjct: 39 NSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGT 98
Query: 409 IGEAREELMRMLSEDELRDAVLLIFANKQDL 501
+ LM + ++ + ++ NK DL
Sbjct: 99 FASIPQWLMNVQKYTN-KNILKVLVGNKTDL 128
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Frame = +1
Query: 280 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIF----------VVDSNDRERIGEAREE 429
+ + I F + DVGGQ R W H F+N ++F +V+S+ R+ E++
Sbjct: 189 DLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDSENRMEESKAL 248
Query: 430 LMRMLSEDELRDAVLLIFANKQDLPNE 510
+++ +++ +++F NK+DL E
Sbjct: 249 FRTIITYPWFQNSSIILFLNKKDLLEE 275
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Frame = +1
Query: 280 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREE 429
+YK + F ++DVGGQ R W H F++ +I+ V + R+ E+ +
Sbjct: 239 DYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEEDESTNRMEESLKL 298
Query: 430 LMRMLSEDELRDAVLLIFANKQDLPNE 510
+++ D +++F NK+DL E
Sbjct: 299 FESIINNKWFVDTSVILFLNKKDLFEE 325
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 IGFNVETVEYKN---ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEARE 426
+ F+V +E K I +WD GQ++ R + Y++NT G + + D +R+ +
Sbjct: 48 VDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMD 107
Query: 427 ELMRMLSEDELRDAVLLIFANKQD 498
E + V ++ +K D
Sbjct: 108 WYKEAKQCVEEAEVVFMLVGHKID 131
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Frame = +1
Query: 280 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVV----------DSNDRERIGEAREE 429
+YK + F ++DVGGQ R W H F++ +I+ V + R+ E+ +
Sbjct: 191 DYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEEDESTNRMEESLKL 250
Query: 430 LMRMLSEDELRDAVLLIFANKQDLPNE 510
+++ D +++F NK+DL E
Sbjct: 251 FESIINNKWFVDTSVILFLNKKDLFEE 277
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 510 MNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 641
++ +TD L ++ L NR W + C + DGL EG+ WL Q+
Sbjct: 179 LSCVRVTDMLQMNKL-NRPWQVNMMCVENLDGLLEGMTWLLKQV 221
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 277 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 456
VE K I VWD GQ++ R + Y++ G + V D ++ + L+ + +
Sbjct: 56 VEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHAD 115
Query: 457 LRDAVLLIFANKQDL 501
V+L+ NK DL
Sbjct: 116 PTIVVMLV-GNKCDL 129
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +1
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 471
+ +WD GQ++ R L Y ++++ + V D + E+ + ++M+ ++ AV
Sbjct: 212 VRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSF-ESVGDWVKMVRDERGEKAV 270
Query: 472 LLIFANKQD 498
++I NK D
Sbjct: 271 IIIVGNKMD 279
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +1
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV 471
+ F +WD GQ++ L Y++ Q I V D +++ A+ ++ L + V
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAK-TWVKELQRQASPNIV 128
Query: 472 LLIFANKQDLPNE 510
+ + NK DL ++
Sbjct: 129 IALSGNKADLASK 141
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 241 NNNSHIGFNVET--VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIG 414
N+ + F ++T V+ K + +WD GQ++ R + + YF+ G++ + D
Sbjct: 472 NSTLGVDFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFL 531
Query: 415 EAREELMRMLSEDELRDAVLLIFANKQDL 501
+ R + + + E + +++ NK D+
Sbjct: 532 DVR-DWVEAIEESCSKPVPIMLCGNKIDI 559
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 IGFNVETVEYKN--ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREE 429
+ F ++T+ I+ +WD GQ++ R + + YF+ G++ D + +
Sbjct: 931 VDFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLK-K 989
Query: 430 LMRMLSEDELRDAVLLIFANKQDLPNE 510
M + E ++ NK DL +
Sbjct: 990 WMVSVEEGAEEGVAKMVLGNKTDLAED 1016
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 256 IGFNVETV--EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 405
I F V+TV K + +WD GQ++ R + Y++ G I + D + E
Sbjct: 56 IDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEE 107
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 286 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDE 456
+++ +WD GQ++ R + + Y+++ G+I D + + + E++ + E
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPE-- 150
Query: 457 LRDAVLLIFANKQDLPNE 510
+A+ L+ NK+DL E
Sbjct: 151 --NAIKLLVGNKKDLERE 166
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/72 (19%), Positives = 32/72 (44%)
Frame = +1
Query: 286 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 465
K I +WD GQ++ + Y++ G++ V D + + + ++ + + D
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI-SKWLKKIDDHANED 61
Query: 466 AVLLIFANKQDL 501
++ NK D+
Sbjct: 62 VKRMLVGNKCDM 73
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 34.7 bits (76), Expect = 0.072
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +1
Query: 286 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRD 465
K + +WD G ++ L R+++ N++ ++ V + + + + +E ++
Sbjct: 56 KKLKIHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPA 113
Query: 466 AVLLIFANKQDLPN 507
A +++ ANK DLPN
Sbjct: 114 AKIVLVANKMDLPN 127
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Frame = +1
Query: 304 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAV---- 471
V DVGGQ R W H+F ++F + + E E+ ML +L + +
Sbjct: 166 VIDVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEITHCE 225
Query: 472 ------LLIFANKQDLPNE 510
++F NK DL N+
Sbjct: 226 FLANTQFILFLNKLDLFNK 244
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +1
Query: 277 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDE 456
V K F +WD GQ++ + L Y+++ I V D R +R L
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLR-PWIRELQRYG 62
Query: 457 LRDAVLLIFANKQD 498
+D V+ + NK D
Sbjct: 63 PQDIVIAVAGNKCD 76
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +1
Query: 304 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIF 483
+WD G ++ L R+++ N++ ++ V + + + + +E ++ A +++
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKE--CTQSAQVNAPAAKIVLV 60
Query: 484 ANKQDLPN 507
ANK DLPN
Sbjct: 61 ANKMDLPN 68
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 286 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRM 441
+ I +WD GQ++ R L +F++ G + V D + R L ++
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQL 215
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 304 VWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERIGEAREELMRMLSEDELRDAVL 474
+WD GQ++ + L +++ + V D N + + R+E + S + +
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 475 LIFANKQDLPN 507
++ NK DL N
Sbjct: 61 VVLGNKIDLEN 71
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 152 GKKEMRILMVGLDAAGKTTILYKLKL 229
G M++++VG +A GKTT++++L L
Sbjct: 548 GYYSMKLMLVGREAQGKTTLMHRLML 573
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 286 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD 390
K I T+ D GQ++ + YF+ QG+ V D
Sbjct: 399 KKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFD 433
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +1
Query: 256 IGFNVETVEYKN---ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEA-- 420
+ F ++T+++ I +W + GQ++ + R Y++ + + D + + A
Sbjct: 53 VDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIK 112
Query: 421 -REELMRMLSEDELRDAVLLIFANKQDLPN 507
+++L + ++ NK DLP+
Sbjct: 113 WKKDLDSKYKLHSRKPVPCILVGNKSDLPD 142
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 301 TVWDVGGQDKIRPLWRHYF 357
TV+D+GG KIR +W+ Y+
Sbjct: 7 TVYDLGGGAKIRGIWKDYY 25
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 370 GLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLI 480
G++FVVD+++RER+ E R L + LLI
Sbjct: 38 GVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 292 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 402
I F VWD GQ+K L Y+ Q I + D R
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR 117
>SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 28.7 bits (61), Expect = 4.8
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Frame = +1
Query: 382 VVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNE*TQP----R*QTNWVCI 549
V++ RERI + EEL R++ E + RD K D+ + + Q C
Sbjct: 27 VMEKRRRERINRSLEELKRLVLEAQHRDCSRYTKLEKADILEMTVKHLRTLQSQQKTGCN 86
Query: 550 RCATVTGTS---KRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQT 684
CA T P+P T TR + PI ++P+ + N+ T
Sbjct: 87 GCAVTEVTQFMVPGQHPMPGTYTTRPGS-FPIQLQSPSGDNTERNTST 133
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 415 EAREELMRMLSEDELRDAVLLIFANKQDL 501
E + +L+ +++ EL+ A LLI ANKQD+
Sbjct: 34 ENKFQLVAIIAICELKQAALLILANKQDI 62
>SB_14988| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-08)
Length = 619
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 297 TNVFVFYCLHIKANMGIVVTISPNLSLYRIVVL 199
TN+ + YC + +G+ V + ++SLY + +L
Sbjct: 402 TNITLPYCYSLAIELGVTVKLLGSVSLYNVTLL 434
>SB_57246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 231 PNLSLYRIVVLPAASKPTINILIS-FLPKRPLNKFANIFPILNYY 100
P+ +L + + P S TI L+S +LP +PL + I +LN+Y
Sbjct: 455 PSNALKCLDIHPLPSSSTITFLLSHYLPPQPLPSSSAITFLLNHY 499
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 161 EMRILMVGLDAAGKTTILYKLKLGEI 238
E RI +VG + +GKTT+L K+ LGE+
Sbjct: 364 ESRIAVVGDNGSGKTTLL-KILLGEL 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,474,991
Number of Sequences: 59808
Number of extensions: 523270
Number of successful extensions: 1416
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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