Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00751
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    25   0.88 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.88 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.88 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.2  

>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 305 QRRCRSGESPPEPLGR 352
           Q +C +GE+P +P+GR
Sbjct: 48  QLKCATGEAPCDPVGR 63


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 591 ASNCYKVVVQADFSCSMTSFVGSEFFSQF 505
           ASNC+    Q+  S    + +G EF+ QF
Sbjct: 120 ASNCFFWSYQSYMSYIFANIMGLEFYKQF 148


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 591 ASNCYKVVVQADFSCSMTSFVGSEFFSQF 505
           ASNC+    Q+  S    + +G EF+ QF
Sbjct: 120 ASNCFFWSYQSYMSYIFANIMGLEFYKQF 148


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 92  TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS-TVSRS 250
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS T+  S
Sbjct: 152 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNS 205


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 92  TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS-TVSRS 250
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS T+  S
Sbjct: 143 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNS 196


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 491  AEAHGNCEKNSLPTKDVIE 547
            A  H N   +S+P KDV E
Sbjct: 1503 ARNHRNSVASSIPAKDVFE 1521


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 491  AEAHGNCEKNSLPTKDVIE 547
            A  H N   +S+P KDV E
Sbjct: 1503 ARNHRNSVASSIPAKDVFE 1521


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 491  AEAHGNCEKNSLPTKDVIE 547
            A  H N   +S+P KDV E
Sbjct: 1503 ARNHRNSVASSIPAKDVFE 1521


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 491  AEAHGNCEKNSLPTKDVIE 547
            A  H N   +S+P KDV E
Sbjct: 1503 ARNHRNSVASSIPAKDVFE 1521


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 616 YFNIDVSQIDLRRPLQVLF 672
           +F ID    + R+P+++LF
Sbjct: 301 FFEIDRINAESRKPIRILF 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,192
Number of Sequences: 336
Number of extensions: 3718
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)