Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00751
(768 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 65 7e-11
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.036
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 34 0.11
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 32 0.59
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 31 0.77
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 31 1.4
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 30 1.8
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 1.8
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 2.4
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0) 30 2.4
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 29 3.1
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 29 3.1
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 5.5
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 29 5.5
SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9) 29 5.5
SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0) 29 5.5
SB_1586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 28 7.2
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 28 7.2
SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01) 25 8.0
SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_39442| Best HMM Match : Hpr_kinase_N (HMM E-Value=4.1) 28 9.5
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3) 28 9.5
SB_34331| Best HMM Match : Transposase_21 (HMM E-Value=0.00032) 28 9.5
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 64.9 bits (151), Expect = 7e-11
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +3
Query: 258 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 437
S+L+H ET+EKN LP KD +A EK GVE F K ++KH T EKNPL
Sbjct: 460 SKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRA 518
Query: 438 XXXXNKF--LNGIENFDPTKLKHTETARRTRSPQR 536
+ + FD +KLKH ET + P +
Sbjct: 519 EMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTK 553
Score = 61.7 bits (143), Expect = 6e-10
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +3
Query: 255 SSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL-XXXXXX 431
+S+LKH ET+EK +P KDV+ AE V+ FD +++KH T+EKNPL
Sbjct: 536 TSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNPLPTPQTLH 593
Query: 432 XXXXXXNK-FLNGIENFDPTKLKHTETARRTRSPQRTSLSK 551
NK + + +FD TKLKH T ++ P + + +
Sbjct: 594 EELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDIKE 634
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +3
Query: 258 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVE--HFDKTQMKHTTTEEKNPLXXXXXX 431
S+LKH TQEKNPLP + E +N D E FD T++KH TT+EK+ +
Sbjct: 573 SKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDI 632
Query: 432 XXXXXXNKFLNGIENFDPTKLKHTETARRTRSPQRTSLSKRNQLEPL 572
++ +++FD +KLKH ET + P L + + E L
Sbjct: 633 KEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVL 677
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +3
Query: 258 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPLXXXXXX 431
S+LKH ET EKNPLP V+ E + L D V FD +++KH +EKNPL
Sbjct: 649 SKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDI 708
Query: 432 XXXXXXNKFLNGIENFDPTKLKHTETARRTRSPQRTSLSK 551
+ ++ FD +KLKH +T + P ++++
Sbjct: 709 TTESTETR--AEVKTFDHSKLKHVQTEEKNPLPDAKTIAQ 746
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +3
Query: 255 SSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 413
+S+LKH E QEKNPLP KD + E V+ FD +++KH TEEKNPL
Sbjct: 688 ASKLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPL 738
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 255 SSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPLXXXXX 428
++ LKH +T+EKN LP + + E D V+ F+K++++H T+EKN L
Sbjct: 419 AANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDT 478
Query: 429 XXXXXXXNKFLNGIENFDPTKLKHTETARRTRSPQRTSL 545
F +G+E F KLKH ET + P ++
Sbjct: 479 IADEKRTAPF-SGVEVFQKNKLKHVETLEKNPLPDAQNI 516
Score = 51.6 bits (118), Expect = 7e-07
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 258 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 437
++LKH TQEK+ +P ++ + E V+ FD +++KH T EKNPL
Sbjct: 613 TKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKE 670
Query: 438 XXXXNKF--LNGIENFDPTKLKHTETARRTRSPQRTSLS 548
++ + +FD +KLKH E + P + ++
Sbjct: 671 EMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDIT 709
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 300 PDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLN--GIE 473
P +V + + + V FD +KH T+EKN L ++F + ++
Sbjct: 396 PGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVK 455
Query: 474 NFDPTKLKHTETARRTRSPQRTSLSKRNQLEP 569
+F+ +KL+H ET + P + +++ + P
Sbjct: 456 SFEKSKLQHVETKEKNTLPTKDTIADEKRTAP 487
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 258 SQLKHTETQEKNPLPDKDVVAAEKA 332
S+LKH +T+EKNPLPD +A EKA
Sbjct: 725 SKLKHVQTEEKNPLPDAKTIAQEKA 749
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +1
Query: 94 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 213
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 94 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 213
+PK D +S++ F+ + L+ V T EK ++PS ED+ E
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 82 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 237
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/93 (29%), Positives = 37/93 (39%)
Frame = +2
Query: 197 KTSPLRRPRSLYSTVSRSLIEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDS 376
++S RRPRS + R P+ RDS E S + + SPP S S
Sbjct: 32 RSSVDRRPRSSRESPERK--RPSSLGRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPS 89
Query: 377 DEAHDDGRKESTAPDRSYRSGEGKEQIPERHRE 475
+ DD R R R +E+ P R R+
Sbjct: 90 RRSSDD-RSTDARDRRDRRRSSSRERRPPRDRD 121
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 31.9 bits (69), Expect = 0.59
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Frame = +2
Query: 230 YSTVSRSLIEPAEAHRDSGEEPASGQRRCRSGESPPE----PLGRS*TLRQDSDEAHDDG 397
YST R + A+ P+ Q RSG S P T+ E +G
Sbjct: 415 YSTRRRKTLVRPRANSLFDRAPSDSQLSIRSGSSGSSTHSIPSIIGDTISLADQEPSGEG 474
Query: 398 RKE------STAPDRSYRSGEGKEQIPERHR 472
R + STA D SY SG G E P HR
Sbjct: 475 RVQRSASIDSTASDSSYDSGSGPELSPNEHR 505
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 125 SSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIEPAEAHRDSGEEPASG 304
+S++S+ ++S+ S M+ L +T P PRS ++SR + R E SG
Sbjct: 300 ASRSSSSSISLASPGMRSSLGSLQRTPPSFTPRS---SISRRRSDTPTKRRRMHREHRSG 356
Query: 305 QRRCRSGESPPEPLGR 352
+R S P +GR
Sbjct: 357 ERVLLSRRRPASAMGR 372
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 12 ESSIPFLIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 146
E S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/71 (16%), Positives = 35/71 (49%)
Frame = +2
Query: 275 RDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 454
++ G+ + +++ R E P + L + ++ D+ + +E PD+ + +++
Sbjct: 829 QEQGKPDKNKEKQDREQEKPDKDLEKQYQKQEKPDKGQEKQDREQEKPDKDQEKQDREQE 888
Query: 455 IPERHRELRSH 487
P++ +E + H
Sbjct: 889 KPDKDQEKQDH 899
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 276 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
+T E++P DK A +LLDG+ FD+ + +H
Sbjct: 261 KTIEQDPTSDKSYKALRDTTHDLLDGLRDFDQAKEEH 297
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 276 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
+T E++P +K A +LLDG++HF + + +H
Sbjct: 163 KTIEQDPSSEKSYQALRDTTHDLLDGLQHFGQAKEEH 199
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -1
Query: 219 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 76
GLL+GD+F R K N+ I VD T G + FEL + + E+ GS
Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 64 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 210
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -1
Query: 219 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 124
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_33049| Best HMM Match : 3_5_exonuc (HMM E-Value=0)
Length = 470
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 377 DEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*AEAHGNCEKNSLPTKDVIEQE 553
D + D E T P R +G+ + RHR+ + A+ ++ P+ DVI Q+
Sbjct: 370 DRSQSDSEPEDTTPLRQKGAGKDNSR-KRRHRKKTGNEAQHSAGSDEEDEPSYDVISQD 427
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 276 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
+T E++P +K A +LLDG+ +FD+ + +H
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEH 573
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 276 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 567 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 276 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 492 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 626 LM*VRSICVVHYKFYFCFCTMATLPG 703
L+ V IC VH FY+C C +++ G
Sbjct: 55 LVAVLRICSVHLDFYYCTCVWSSMAG 80
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 152 SVTSTPMKRLCFRLLKTSPLRRPRSLYSTVS-RSLIE----PAEAHRDSGEEPASGQRRC 316
SVT T +RL R S L PRS+ T S R+L A R GEE G+ +C
Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGEYKC 497
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 214 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 98
S WRRLQ+ A S + + D +L A+ G W PW
Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456
>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
Length = 781
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Frame = +2
Query: 29 PHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFR------ 190
P + + E P P + L P T+ P+ V +ASTP S +P R
Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSPTSATRKRPSEGGD 576
Query: 191 LLKTSPLRRPRSLYSTVSRSLIEPAEAHRDSGEEPASGQRRCR 319
L P RP + T S++ P + + P S RC+
Sbjct: 577 ALTEGPYVRPGTPMGTGSQT-SAPLGSDPYLSKTPTSSINRCK 618
>SB_20040| Best HMM Match : DUF293 (HMM E-Value=2.9)
Length = 646
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -2
Query: 458 EFVLFLLRFDSFDRGQWILFFRRRVLHLSLVEVFNSVQEVL 336
+FVL++LRF +D I ++ + HL+LVE + +Q+ L
Sbjct: 295 DFVLYMLRFSDYD----IYTGKKSIAHLTLVEFESWLQDEL 331
>SB_17538| Best HMM Match : Iso_dh (HMM E-Value=0)
Length = 644
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 583 VTRKCISLVSPYFNIDVSQIDL 648
+ KC L+SPY ++D+ DL
Sbjct: 13 IAAKCTQLISPYLDLDIKYFDL 34
>SB_1586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 206 PLRRPRSLYSTVSR--SLIEPAEAHRDSGEEPASGQ 307
P + PR+ S VSR S++ P+ H D P SGQ
Sbjct: 299 PFQVPRNSVSFVSRRASVLSPSPKHSDYSGRPTSGQ 334
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 85 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 213
L DL +V +LKS+ EG CL D++ + DV E
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 285 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 75 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 108
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 285 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 173 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 206
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 285 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 222 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 255
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 285 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 386
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 320 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 353
>SB_10698| Best HMM Match : bZIP_1 (HMM E-Value=0.01)
Length = 590
Score = 24.6 bits (51), Expect(2) = 8.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 371 DSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHREL 478
DSD+ +DD +STA R R + + P R L
Sbjct: 281 DSDDDYDDREGDSTAKIRKGRRSDTDDLSPNPRRLL 316
Score = 21.8 bits (44), Expect(2) = 8.0
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 257 EPAEAHRDSGEE 292
EP E H DSG+E
Sbjct: 267 EPMEIHDDSGDE 278
>SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +2
Query: 260 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 439
P + HR S + +G+R G+ PE R ++ + E + T G
Sbjct: 75 PEKQHRGSVHKRGNGER----GQGSPEKQQRGSVHKRGNGEGKSSPENQHTGSIYKRGKG 130
Query: 440 EGKEQIPERHR 472
EGK +HR
Sbjct: 131 EGKSSPENQHR 141
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 125 SSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLIEPAEAHRDSGEEPASG 304
++ S+ +VS+ S M+ L T P PRS ++SR + R E SG
Sbjct: 587 AASRSSSSVSLASPGMRSSLGSLQLTPPSFTPRS---SISRRRSDTPTKRRRMHREHRSG 643
Query: 305 QRRCRSGESPPEPLGR 352
+R S P +GR
Sbjct: 644 ERVLLSRRRPASAMGR 659
>SB_39442| Best HMM Match : Hpr_kinase_N (HMM E-Value=4.1)
Length = 212
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 536 PLWGASSSRSFRVLQLSGIEVLDAVQ 459
PLW SS + VLQL G + DA +
Sbjct: 21 PLWCTSSDKGDDVLQLVGFRIFDATK 46
>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 259 LDQTSRYRRIKTSGSSQWRRLQQTEAQSFHWCRRHGD 149
L +TS Y ++ SGSS RRL+ S+ R GD
Sbjct: 38 LSKTSSYGDVELSGSSSRRRLRVMAMSSYRGVRVIGD 74
>SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3)
Length = 334
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +2
Query: 284 GEEPASGQRR----CRSGESPPEPLGRS*T-LRQDSDEAHDDGRK---ESTAPDRSYRSG 439
GEEP+S S + P P+ + + +D D+ +G + ES A DRS+ SG
Sbjct: 181 GEEPSSRTETPDLYILSNDIPTSPVDEAPLPVDEDDDDEQVNGLRMLPESVALDRSHESG 240
Query: 440 EGKEQIP 460
G +P
Sbjct: 241 RGTPHLP 247
>SB_34331| Best HMM Match : Transposase_21 (HMM E-Value=0.00032)
Length = 276
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 242 SRSLIEPAEAHRDSGEEP 295
SRSLIEP+EAH ++ EP
Sbjct: 257 SRSLIEPSEAHCNAALEP 274
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,977,767
Number of Sequences: 59808
Number of extensions: 514684
Number of successful extensions: 1844
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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